RNA–Protein interactions for RNA: ENST00000373088.5

PCDH11X-204, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-204ENST00000373088 ELANEP08246 267 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 HOXD3P31249 432 aaPredicted RBP3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 RNASE4P34096 147 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 SNRPD3P62318 126 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 EBLN2Q6P2I7 272 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 LINC00322Q6ZN03 302 aaPredicted RBP3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 TMEM18Q96B42 140 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 MBD6Q96DN6 1003 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 IGF2BP2-AS1Q96M15 143 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 ZFAND3Q9H8U3 227 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 NRN1Q9NPD7 142 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 APCP25054 2843 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 A0A096LNT2 108 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 IGHV7-4-1A0A0J9YVY3 117 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 FABP5P3A8MUU1 101 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 SH2D1AO60880 128 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 HSBP1O75506 76 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 IGHG4P01861 327 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 C1orf194Q5T5A4 169 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 C18orf65Q6ZTR6 163 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 TMEM190Q8WZ59 177 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 AP1S3Q96PC3 154 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 SMPXQ9UHP9 88 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 SMAD5-AS1Q9Y6J3 95 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 CSMD1Q96PZ7 3565 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 LTAP01374 205 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 IGLV2-8P01709 118 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 HLA-DQA1P01909 254 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 EDN2P20800 178 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 AMTP48728 403 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 ZNF138P52744 262 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 HBBP68871 147 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 TCTEX1D4Q5JR98 221 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 SPANXN1Q5VSR9 72 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 OR1N2Q8NGR9 330 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 PACRGQ96M98 296 aaPredicted RBP3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 PRR25Q96S07 402 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 AGPAT4-IT1Q9H0P7 198 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 ZNF702PQ9H963 129 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 UBR5O95071 2799 aaPredicted RBP3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 CELSR1Q9NYQ6 3014 aa3.5□□□□□ -1.85
PCDH11X-204ENST00000373088 LOC389332A0A1B0GUA5 103 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 A0A1B0GUT8 65 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 LGALS1P09382 135 aaKnown RBP3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 CDX1P47902 265 aaPredicted RBP3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 MEOX2P50222 304 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 KRTDAPP60985 99 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 C9orf139Q6ZV77 190 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 FOXC2Q99958 501 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 GCN1Q92616 2671 aaKnown RBP3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 C2CD3Q4AC94 2353 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 IGHV3OR16-12A0A075B7B8 117 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 CLPSL1A2RUU4 121 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 C5orf52A6NGY3 159 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 MT-ND6P03923 174 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 S100A8P05109 93 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 FXYD7P58549 80 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 FOXE3Q13461 319 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 IQCJQ1A5X6 159 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 COX19Q49B96 90 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 C16orf54Q6UWD8 224 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 TMEM256Q8N2U0 113 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 FBN2P35556 2912 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 F8P00451 2351 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 M0R381 172 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 SPRY2O43597 315 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 CD5LO43866 347 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 ARMS2P0C7Q2 107 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 HOXA5P20719 270 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 PSMB8P28062 276 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 MYCNOSP40205 109 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 LYZL1Q6UWQ5 148 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 Q6ZSV7 163 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 FER1L6-AS1Q8NA97 138 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 PRSS3P2Q8NHM4 247 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 TMEM208Q9BTX3 173 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 PEMTQ9UBM1 199 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 KLF12Q9Y4X4 402 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 INAFM1C9JVW0 142 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 LINC01619G3V211 115 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 PHOX2AO14813 284 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 IGLV1-40P01703 118 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 PF4P02776 101 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 ACTL10Q5JWF8 245 aa3.49□□□□□ -1.85
PCDH11X-204ENST00000373088 F5H697 171 aa3.48□□□□□ -1.85
PCDH11X-204ENST00000373088 OVOL1O14753 267 aa3.48□□□□□ -1.85
PCDH11X-204ENST00000373088 NDUFS6O75380 124 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-204ENST00000373088 LY6G6DO95868 133 aa3.48□□□□□ -1.85
PCDH11X-204ENST00000373088 FAM231DQ6ZW35 169 aa3.48□□□□□ -1.85
PCDH11X-204ENST00000373088 FAM19A2Q8N3H0 131 aa3.48□□□□□ -1.85
PCDH11X-204ENST00000373088 UBE2E2Q96LR5 201 aa3.48□□□□□ -1.85
PCDH11X-204ENST00000373088 TRAV9-1A0A075B6T8 112 aa3.48□□□□□ -1.85
PCDH11X-204ENST00000373088 TRAV12-3A0A0B4J271 114 aa3.48□□□□□ -1.85
PCDH11X-204ENST00000373088 TMEM213A2RRL7 107 aa3.48□□□□□ -1.85
PCDH11X-204ENST00000373088 MRPS12O15235 138 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-204ENST00000373088 SERF1AO75920 110 aa3.48□□□□□ -1.85
PCDH11X-204ENST00000373088 DEFB131AP59861 70 aa3.48□□□□□ -1.85
PCDH11X-204ENST00000373088 FAM159AQ6UWV7 190 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms