RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 ANK2Q01484 3957 aa12.25□□□□□ -0.45
C9orf78-201ENST00000372447 DNHD1Q96M86 4753 aa12.25□□□□□ -0.45
C9orf78-201ENST00000372447 A0A1W2PRX2 142 aa12.25□□□□□ -0.45
C9orf78-201ENST00000372447 BUB3O43684 328 aa12.25□□□□□ -0.45
C9orf78-201ENST00000372447 ZNF253O75346 499 aa12.25□□□□□ -0.45
C9orf78-201ENST00000372447 CSN1S1P47710 185 aa12.25□□□□□ -0.45
C9orf78-201ENST00000372447 CT83Q5H943 113 aa12.25□□□□□ -0.45
C9orf78-201ENST00000372447 TMEM136Q6ZRR5 245 aa12.25□□□□□ -0.45
C9orf78-201ENST00000372447 NUP35Q8NFH5 326 aa12.25□□□□□ -0.45
C9orf78-201ENST00000372447 UBE2E2Q96LR5 201 aa12.25□□□□□ -0.45
C9orf78-201ENST00000372447 PSG8Q9UQ74 426 aa12.25□□□□□ -0.45
C9orf78-201ENST00000372447 SERTM2A0A1B0GWG4 89 aa12.24□□□□□ -0.45
C9orf78-201ENST00000372447 ARL6IP6Q8N6S5 226 aa12.24□□□□□ -0.45
C9orf78-201ENST00000372447 SPATA3Q8NHX4 192 aa12.24□□□□□ -0.45
C9orf78-201ENST00000372447 NEU1Q99519 415 aa12.24□□□□□ -0.45
C9orf78-201ENST00000372447 NSUN5P1Q3KNT7 163 aa12.23□□□□□ -0.45
C9orf78-201ENST00000372447 RASL11AQ6T310 242 aa12.23□□□□□ -0.45
C9orf78-201ENST00000372447 NDUFA11Q86Y39 141 aa12.23□□□□□ -0.45
C9orf78-201ENST00000372447 PACRGQ96M98 296 aaPredicted RBP12.23□□□□□ -0.45
C9orf78-201ENST00000372447 METTL26Q96S19 204 aa12.23□□□□□ -0.45
C9orf78-201ENST00000372447 ZNF331Q9NQX6 463 aaPredicted RBP12.23□□□□□ -0.45
C9orf78-201ENST00000372447 TRRAPQ9Y4A5 3859 aa12.23□□□□□ -0.45
C9orf78-201ENST00000372447 PCP4L1A6NKN8 68 aa12.23□□□□□ -0.45
C9orf78-201ENST00000372447 HIGD1CA8MV81 97 aa12.23□□□□□ -0.45
C9orf78-201ENST00000372447 A8MWL6 223 aa12.23□□□□□ -0.45
C9orf78-201ENST00000372447 NPIPB6E9PJ23 425 aa12.23□□□□□ -0.45
C9orf78-201ENST00000372447 IGHV3-11P01762 117 aa12.23□□□□□ -0.45
C9orf78-201ENST00000372447 HLA-DQA1P01909 254 aa12.23□□□□□ -0.45
C9orf78-201ENST00000372447 C1orf194Q5T5A4 169 aa12.23□□□□□ -0.45
C9orf78-201ENST00000372447 GBGT1Q8N5D6 347 aa12.23□□□□□ -0.45
C9orf78-201ENST00000372447 USMG5Q96IX5 58 aa12.23□□□□□ -0.45
C9orf78-201ENST00000372447 A0A087X0K7 114 aa12.22□□□□□ -0.45
C9orf78-201ENST00000372447 A0A0G2JLM5 398 aa12.22□□□□□ -0.45
C9orf78-201ENST00000372447 ZNF785A8K8V0 405 aa12.22□□□□□ -0.45
C9orf78-201ENST00000372447 AMBPP02760 352 aa12.22□□□□□ -0.45
C9orf78-201ENST00000372447 PRB4P10163 310 aaPredicted RBP12.22□□□□□ -0.45
C9orf78-201ENST00000372447 RAB4BP61018 213 aa12.22□□□□□ -0.45
C9orf78-201ENST00000372447 PYY3Q5JQD4 70 aa12.22□□□□□ -0.45
C9orf78-201ENST00000372447 ZC2HC1AQ96GY0 325 aa12.22□□□□□ -0.45
C9orf78-201ENST00000372447 NIT2Q9NQR4 276 aa12.22□□□□□ -0.45
C9orf78-201ENST00000372447 GRIFINA4D1Z8 144 aa12.21□□□□□ -0.45
C9orf78-201ENST00000372447 CRISP2P16562 243 aa12.21□□□□□ -0.45
C9orf78-201ENST00000372447 ARL3P36405 182 aa12.21□□□□□ -0.45
C9orf78-201ENST00000372447 KLHL30-AS1Q8NEE0 82 aa12.21□□□□□ -0.45
C9orf78-201ENST00000372447 OR4B1Q8NGF8 309 aa12.21□□□□□ -0.45
C9orf78-201ENST00000372447 GFRA4Q9GZZ7 299 aa12.21□□□□□ -0.45
C9orf78-201ENST00000372447 IGHV3-66A0A0C4DH42 116 aa12.2□□□□□ -0.46
C9orf78-201ENST00000372447 APOHP02749 345 aaPredicted RBP12.2□□□□□ -0.46
C9orf78-201ENST00000372447 C8orf86Q6ZUL3 223 aa12.2□□□□□ -0.46
C9orf78-201ENST00000372447 TCF24Q7RTU0 167 aa12.2□□□□□ -0.46
C9orf78-201ENST00000372447 ATP5L2Q7Z4Y8 100 aa12.2□□□□□ -0.46
C9orf78-201ENST00000372447 C4orf3Q8WVX3 66 aa12.2□□□□□ -0.46
C9orf78-201ENST00000372447 U3KQE9 123 aa12.2□□□□□ -0.46
C9orf78-201ENST00000372447 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.2□□□□□ -0.46
C9orf78-201ENST00000372447 CHEK1O14757 476 aa12.2□□□□□ -0.46
C9orf78-201ENST00000372447 C16orf54Q6UWD8 224 aa12.2□□□□□ -0.46
C9orf78-201ENST00000372447 ASCL2Q99929 193 aa12.2□□□□□ -0.46
C9orf78-201ENST00000372447 IGKV2-40A0A087WW87 121 aaPredicted RBP12.19□□□□□ -0.46
C9orf78-201ENST00000372447 FAM231BA6NCW3 169 aa12.19□□□□□ -0.46
C9orf78-201ENST00000372447 FBLL1A6NHQ2 334 aaKnown RBP12.19□□□□□ -0.46
C9orf78-201ENST00000372447 ZNF207O43670 478 aaKnown RBP12.19□□□□□ -0.46
C9orf78-201ENST00000372447 IGKV2D-40P01614 121 aaPredicted RBP12.19□□□□□ -0.46
C9orf78-201ENST00000372447 LGALS1P09382 135 aaKnown RBP12.19□□□□□ -0.46
C9orf78-201ENST00000372447 DEFB136Q30KP8 78 aa12.19□□□□□ -0.46
C9orf78-201ENST00000372447 IGFL4Q6B9Z1 124 aa12.19□□□□□ -0.46
C9orf78-201ENST00000372447 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.19□□□□□ -0.46
C9orf78-201ENST00000372447 TMEM256Q8N2U0 113 aa12.19□□□□□ -0.46
C9orf78-201ENST00000372447 GTSF1Q8WW33 167 aa12.19□□□□□ -0.46
C9orf78-201ENST00000372447 TMEM18Q96B42 140 aa12.19□□□□□ -0.46
C9orf78-201ENST00000372447 IGHV3OR16-13A0A075B7E8 117 aa12.18□□□□□ -0.46
C9orf78-201ENST00000372447 IGHV3-74A0A0B4J1X5 117 aa12.18□□□□□ -0.46
C9orf78-201ENST00000372447 TRBV12-3P01733 135 aa12.18□□□□□ -0.46
C9orf78-201ENST00000372447 APCSP02743 223 aa12.18□□□□□ -0.46
C9orf78-201ENST00000372447 HLA-DMBP28068 263 aa12.18□□□□□ -0.46
C9orf78-201ENST00000372447 Q0VG73 95 aa12.18□□□□□ -0.46
C9orf78-201ENST00000372447 OR2D3Q8NGH3 330 aa12.18□□□□□ -0.46
C9orf78-201ENST00000372447 SLC50A1Q9BRV3 221 aa12.18□□□□□ -0.46
C9orf78-201ENST00000372447 IGHV3-49A0A0A0MS15 119 aa12.18□□□□□ -0.46
C9orf78-201ENST00000372447 A0A1B0GXF2 115 aa12.18□□□□□ -0.46
C9orf78-201ENST00000372447 NDUFA4O00483 81 aa12.18□□□□□ -0.46
C9orf78-201ENST00000372447 CRIP1P50238 77 aa12.18□□□□□ -0.46
C9orf78-201ENST00000372447 KIAA1644Q3SXP7 199 aa12.18□□□□□ -0.46
C9orf78-201ENST00000372447 LCN12Q6JVE5 192 aa12.18□□□□□ -0.46
C9orf78-201ENST00000372447 RBPMS2Q6ZRY4 209 aaKnown RBP12.18□□□□□ -0.46
C9orf78-201ENST00000372447 RAX2Q96IS3 184 aa12.18□□□□□ -0.46
C9orf78-201ENST00000372447 C8orf49Q96NF6 230 aa12.18□□□□□ -0.46
C9orf78-201ENST00000372447 DUX3Q96PT4 197 aa12.18□□□□□ -0.46
C9orf78-201ENST00000372447 TP53TG3Q9ULZ0 132 aa12.18□□□□□ -0.46
C9orf78-201ENST00000372447 ZNF705FA8MVS1 300 aaPredicted RBP12.17□□□□□ -0.46
C9orf78-201ENST00000372447 NUPR1O60356 82 aa12.17□□□□□ -0.46
C9orf78-201ENST00000372447 CT45A10P0DMU9 189 aa12.17□□□□□ -0.46
C9orf78-201ENST00000372447 SAPCD1Q5SSQ6 148 aa12.17□□□□□ -0.46
C9orf78-201ENST00000372447 GDF5OSQ5U4N7 250 aa12.17□□□□□ -0.46
C9orf78-201ENST00000372447 OR11H1Q8NG94 326 aa12.17□□□□□ -0.46
C9orf78-201ENST00000372447 PGLYRP4Q96LB8 373 aa12.17□□□□□ -0.46
C9orf78-201ENST00000372447 WNK1Q9H4A3 2382 aa12.17□□□□□ -0.46
C9orf78-201ENST00000372447 SLAQ13239 276 aa12.16□□□□□ -0.46
C9orf78-201ENST00000372447 COX8CQ7Z4L0 72 aa12.16□□□□□ -0.46
C9orf78-201ENST00000372447 PEF1Q9UBV8 284 aaKnown RBP12.16□□□□□ -0.46
C9orf78-201ENST00000372447 VWFP04275 2813 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms