RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 TGIF2-C20orf24A0A0A6YYL0 155 aa19.84■□□□□ 0.77
ATPAF1-202ENST00000371937 ZNF705GA8MUZ8 300 aaPredicted RBP19.84■□□□□ 0.77
ATPAF1-202ENST00000371937 DAZAP1Q96EP5 407 aaKnown RBP19.84■□□□□ 0.77
ATPAF1-202ENST00000371937 PRR25Q96S07 402 aa19.84■□□□□ 0.77
ATPAF1-202ENST00000371937 NDFIP1Q9BT67 221 aa19.84■□□□□ 0.77
ATPAF1-202ENST00000371937 OVOL1O14753 267 aa19.83■□□□□ 0.77
ATPAF1-202ENST00000371937 GATCO43716 136 aaKnown RBP19.83■□□□□ 0.77
ATPAF1-202ENST00000371937 CXCL1P09341 107 aa19.83■□□□□ 0.76
ATPAF1-202ENST00000371937 CT45A10P0DMU9 189 aa19.83■□□□□ 0.76
ATPAF1-202ENST00000371937 PAFAH1B2P68402 229 aa19.83■□□□□ 0.76
ATPAF1-202ENST00000371937 TMEM78Q5T7P6 136 aa19.83■□□□□ 0.76
ATPAF1-202ENST00000371937 COX8CQ7Z4L0 72 aa19.83■□□□□ 0.76
ATPAF1-202ENST00000371937 ZC2HC1AQ96GY0 325 aa19.83■□□□□ 0.76
ATPAF1-202ENST00000371937 BTF3L4Q96K17 158 aa19.83■□□□□ 0.76
ATPAF1-202ENST00000371937 C2CD3Q4AC94 2353 aa19.83■□□□□ 0.76
ATPAF1-202ENST00000371937 CSN3P07498 182 aa19.82■□□□□ 0.76
ATPAF1-202ENST00000371937 C9orf47Q6ZRZ4 202 aa19.82■□□□□ 0.76
ATPAF1-202ENST00000371937 FAM210BQ96KR6 192 aa19.82■□□□□ 0.76
ATPAF1-202ENST00000371937 C19orf71A6NCJ1 209 aa19.81■□□□□ 0.76
ATPAF1-202ENST00000371937 ERCC8Q13216 396 aa19.81■□□□□ 0.76
ATPAF1-202ENST00000371937 WFDC3Q8IUB2 231 aa19.81■□□□□ 0.76
ATPAF1-202ENST00000371937 PYGO2Q9BRQ0 406 aa19.81■□□□□ 0.76
ATPAF1-202ENST00000371937 A0A1W2PPQ1 181 aa19.81■□□□□ 0.76
ATPAF1-202ENST00000371937 CYSRT1A8MQ03 144 aa19.81■□□□□ 0.76
ATPAF1-202ENST00000371937 P01737 135 aa19.81■□□□□ 0.76
ATPAF1-202ENST00000371937 FAM3BP58499 235 aaPredicted RBP19.81■□□□□ 0.76
ATPAF1-202ENST00000371937 LINC00322Q6ZN03 302 aaPredicted RBP19.81■□□□□ 0.76
ATPAF1-202ENST00000371937 NDUFA11Q86Y39 141 aa19.81■□□□□ 0.76
ATPAF1-202ENST00000371937 Q8TAT8 98 aa19.81■□□□□ 0.76
ATPAF1-202ENST00000371937 AGPAT4-IT1Q9H0P7 198 aa19.81■□□□□ 0.76
ATPAF1-202ENST00000371937 SNRPD3P62318 126 aaKnown RBP19.8■□□□□ 0.76
ATPAF1-202ENST00000371937 OR10J6PQ8NGY7 276 aa19.8■□□□□ 0.76
ATPAF1-202ENST00000371937 ASCL2Q99929 193 aa19.8■□□□□ 0.76
ATPAF1-202ENST00000371937 PPP1R14DQ9NXH3 145 aa19.8■□□□□ 0.76
ATPAF1-202ENST00000371937 ADARB2-AS1A8MUL3 147 aa19.79■□□□□ 0.76
ATPAF1-202ENST00000371937 ZNF138P52744 262 aa19.79■□□□□ 0.76
ATPAF1-202ENST00000371937 DYNLRB2Q8TF09 96 aa19.79■□□□□ 0.76
ATPAF1-202ENST00000371937 C8orf49Q96NF6 230 aa19.79■□□□□ 0.76
ATPAF1-202ENST00000371937 TRAV9-1A0A075B6T8 112 aa19.79■□□□□ 0.76
ATPAF1-202ENST00000371937 K7EQG2 157 aa19.79■□□□□ 0.76
ATPAF1-202ENST00000371937 TFPI2P48307 235 aa19.79■□□□□ 0.76
ATPAF1-202ENST00000371937 NSUN5P1Q3KNT7 163 aa19.79■□□□□ 0.76
ATPAF1-202ENST00000371937 RPP21Q9H633 154 aaKnown RBP19.79■□□□□ 0.76
ATPAF1-202ENST00000371937 RBPMS2Q6ZRY4 209 aaKnown RBP19.78■□□□□ 0.76
ATPAF1-202ENST00000371937 LINC00477Q96M19 166 aa19.78■□□□□ 0.76
ATPAF1-202ENST00000371937 KRTAP10-3P60369 221 aa19.77■□□□□ 0.76
ATPAF1-202ENST00000371937 CT83Q5H943 113 aa19.77■□□□□ 0.76
ATPAF1-202ENST00000371937 OR4B1Q8NGF8 309 aa19.77■□□□□ 0.76
ATPAF1-202ENST00000371937 RPS10P46783 165 aaKnown RBP19.76■□□□□ 0.75
ATPAF1-202ENST00000371937 SMUG1Q53HV7 270 aa19.76■□□□□ 0.75
ATPAF1-202ENST00000371937 GPR61Q9BZJ8 451 aa19.76■□□□□ 0.75
ATPAF1-202ENST00000371937 SIGLEC8Q9NYZ4 499 aa19.76■□□□□ 0.75
ATPAF1-202ENST00000371937 LENEPQ9Y5L5 61 aa19.76■□□□□ 0.75
ATPAF1-202ENST00000371937 SMIM27A0A1W2PRY6 76 aa19.76■□□□□ 0.75
ATPAF1-202ENST00000371937 NPIPB6E9PJ23 425 aa19.76■□□□□ 0.75
ATPAF1-202ENST00000371937 FAM162BQ5T6X4 162 aa19.76■□□□□ 0.75
ATPAF1-202ENST00000371937 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.76■□□□□ 0.75
ATPAF1-202ENST00000371937 TRAV2A0A0B4J234 112 aa19.75■□□□□ 0.75
ATPAF1-202ENST00000371937 OR8A1Q8NGG7 326 aa19.75■□□□□ 0.75
ATPAF1-202ENST00000371937 TSKUQ8WUA8 353 aa19.75■□□□□ 0.75
ATPAF1-202ENST00000371937 NIPBLQ6KC79 2804 aaeCLIP19.75■□□□□ 0.75
ATPAF1-202ENST00000371937 A8MWL6 223 aa19.74■□□□□ 0.75
ATPAF1-202ENST00000371937 CA1P00915 261 aaPredicted RBP19.74■□□□□ 0.75
ATPAF1-202ENST00000371937 CRIP1P50238 77 aa19.74■□□□□ 0.75
ATPAF1-202ENST00000371937 DEFB114Q30KQ6 69 aa19.74■□□□□ 0.75
ATPAF1-202ENST00000371937 TYMSP04818 313 aa19.73■□□□□ 0.75
ATPAF1-202ENST00000371937 ZNF688P0C7X2 276 aa19.73■□□□□ 0.75
ATPAF1-202ENST00000371937 ZNF705DP0CH99 300 aaPredicted RBP19.73■□□□□ 0.75
ATPAF1-202ENST00000371937 ZNF705BP0CI00 300 aaPredicted RBP19.73■□□□□ 0.75
ATPAF1-202ENST00000371937 RPL19P84098 196 aaKnown RBP19.73■□□□□ 0.75
ATPAF1-202ENST00000371937 PSMG4Q5JS54 123 aa19.73■□□□□ 0.75
ATPAF1-202ENST00000371937 HIST1H1AQ02539 215 aaPredicted RBP19.72■□□□□ 0.75
ATPAF1-202ENST00000371937 TMEM61Q8N0U2 210 aa19.72■□□□□ 0.75
ATPAF1-202ENST00000371937 C1orf196B1AJZ1 125 aa19.72■□□□□ 0.75
ATPAF1-202ENST00000371937 OR2D3Q8NGH3 330 aa19.72■□□□□ 0.75
ATPAF1-202ENST00000371937 SRD5A3Q9H8P0 318 aa19.72■□□□□ 0.75
ATPAF1-202ENST00000371937 TRAV25A0A0B4J276 109 aa19.71■□□□□ 0.75
ATPAF1-202ENST00000371937 TCL1AP56279 114 aa19.71■□□□□ 0.75
ATPAF1-202ENST00000371937 NAT8BQ9UHF3 227 aa19.71■□□□□ 0.75
ATPAF1-202ENST00000371937 SH2D1AO60880 128 aa19.7■□□□□ 0.74
ATPAF1-202ENST00000371937 GFRA4Q9GZZ7 299 aa19.7■□□□□ 0.74
ATPAF1-202ENST00000371937 FAM231BA6NCW3 169 aa19.69■□□□□ 0.74
ATPAF1-202ENST00000371937 FABP5P3A8MUU1 101 aa19.69■□□□□ 0.74
ATPAF1-202ENST00000371937 F6UB75 175 aa19.69■□□□□ 0.74
ATPAF1-202ENST00000371937 DEFB1P60022 68 aa19.69■□□□□ 0.74
ATPAF1-202ENST00000371937 TRBV7-9A0A0J9YWB2 115 aa19.69■□□□□ 0.74
ATPAF1-202ENST00000371937 CD300EQ496F6 205 aaPredicted RBP19.69■□□□□ 0.74
ATPAF1-202ENST00000371937 NEU1Q99519 415 aa19.69■□□□□ 0.74
ATPAF1-202ENST00000371937 JMJD1CQ15652 2540 aa19.68■□□□□ 0.74
ATPAF1-202ENST00000371937 ZNF80P51504 273 aaPredicted RBP19.68■□□□□ 0.74
ATPAF1-202ENST00000371937 IZUMO1RA6ND01 250 aa19.67■□□□□ 0.74
ATPAF1-202ENST00000371937 RAB5BP61020 215 aa19.67■□□□□ 0.74
ATPAF1-202ENST00000371937 SPAG8Q99932 426 aaPredicted RBP19.67■□□□□ 0.74
ATPAF1-202ENST00000371937 WNK1Q9H4A3 2382 aa19.67■□□□□ 0.74
ATPAF1-202ENST00000371937 HIGD1CA8MV81 97 aa19.67■□□□□ 0.74
ATPAF1-202ENST00000371937 EBLN2Q6P2I7 272 aa19.67■□□□□ 0.74
ATPAF1-202ENST00000371937 XKRY2A2RUG3 117 aa19.66■□□□□ 0.74
ATPAF1-202ENST00000371937 OR4C46A6NHA9 309 aa19.66■□□□□ 0.74
ATPAF1-202ENST00000371937 PF4P02776 101 aa19.66■□□□□ 0.74
ATPAF1-202ENST00000371937 NUP35Q8NFH5 326 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms