RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 SNRPCP09234 159 aaKnown RBP11.28□□□□□ -0.6
VMA21-202ENST00000370361 C6orf223Q8N319 242 aa11.28□□□□□ -0.6
VMA21-202ENST00000370361 WDR61Q9GZS3 305 aaKnown RBP11.28□□□□□ -0.6
VMA21-202ENST00000370361 MBD2Q9UBB5 411 aa11.28□□□□□ -0.6
VMA21-202ENST00000370361 HSPB11Q9Y547 144 aa11.28□□□□□ -0.6
VMA21-202ENST00000370361 DNAH2Q9P225 4427 aa11.27□□□□□ -0.6
VMA21-202ENST00000370361 TRAV12-3A0A0B4J271 114 aa11.27□□□□□ -0.61
VMA21-202ENST00000370361 C7orf71A4D174 169 aa11.27□□□□□ -0.61
VMA21-202ENST00000370361 KLLNB2CW77 178 aa11.27□□□□□ -0.61
VMA21-202ENST00000370361 H3BTX0 84 aa11.27□□□□□ -0.61
VMA21-202ENST00000370361 RPL12P30050 165 aaKnown RBP11.27□□□□□ -0.61
VMA21-202ENST00000370361 ANXA2RQ3ZCQ2 193 aa11.27□□□□□ -0.61
VMA21-202ENST00000370361 SSX7Q7RTT5 188 aa11.27□□□□□ -0.61
VMA21-202ENST00000370361 ATP5SQ99766 215 aa11.27□□□□□ -0.61
VMA21-202ENST00000370361 UPK3BQ9BT76 320 aa11.27□□□□□ -0.61
VMA21-202ENST00000370361 KRTAP17-1Q9BYP8 105 aa11.27□□□□□ -0.61
VMA21-202ENST00000370361 LINC00588Q9Y4M8 146 aa11.27□□□□□ -0.61
VMA21-202ENST00000370361 TRAV26-1A0A087WT03 109 aa11.26□□□□□ -0.61
VMA21-202ENST00000370361 TRBV7-9A0A0J9YWB2 115 aa11.26□□□□□ -0.61
VMA21-202ENST00000370361 A0A1W2PPQ1 181 aa11.26□□□□□ -0.61
VMA21-202ENST00000370361 OR5I1Q13606 314 aa11.26□□□□□ -0.61
VMA21-202ENST00000370361 GCSAMLQ5JQS6 135 aa11.26□□□□□ -0.61
VMA21-202ENST00000370361 C9orf47Q6ZRZ4 202 aa11.26□□□□□ -0.61
VMA21-202ENST00000370361 MRPL32Q9BYC8 188 aaKnown RBP11.26□□□□□ -0.61
VMA21-202ENST00000370361 DNAH17Q9UFH2 4485 aa11.25□□□□□ -0.61
VMA21-202ENST00000370361 GAGE12BA1L429 117 aa11.25□□□□□ -0.61
VMA21-202ENST00000370361 GAGE7O76087 117 aa11.25□□□□□ -0.61
VMA21-202ENST00000370361 GAGE12FP0CL80 117 aa11.25□□□□□ -0.61
VMA21-202ENST00000370361 GAGE12GP0CL81 117 aa11.25□□□□□ -0.61
VMA21-202ENST00000370361 GAGE12IP0CL82 117 aa11.25□□□□□ -0.61
VMA21-202ENST00000370361 CRISP2P16562 243 aa11.25□□□□□ -0.61
VMA21-202ENST00000370361 KIR3DS1Q14943 382 aa11.25□□□□□ -0.61
VMA21-202ENST00000370361 IBA57Q5T440 356 aaKnown RBP11.25□□□□□ -0.61
VMA21-202ENST00000370361 EIF4E3Q8N5X7 224 aaKnown RBP11.25□□□□□ -0.61
VMA21-202ENST00000370361 FAM19A4Q96LR4 140 aa11.25□□□□□ -0.61
VMA21-202ENST00000370361 PARD6GQ9BYG4 376 aaPredicted RBP11.25□□□□□ -0.61
VMA21-202ENST00000370361 MED28Q9H204 178 aa11.25□□□□□ -0.61
VMA21-202ENST00000370361 C17orf112F2Z3M2 114 aa11.24□□□□□ -0.61
VMA21-202ENST00000370361 NDUFB4O95168 129 aa11.24□□□□□ -0.61
VMA21-202ENST00000370361 TMEM78Q5T7P6 136 aa11.24□□□□□ -0.61
VMA21-202ENST00000370361 Q9H8V8 135 aa11.24□□□□□ -0.61
VMA21-202ENST00000370361 TRGV2A0A075B6R0 118 aa11.23□□□□□ -0.61
VMA21-202ENST00000370361 M0R3E3 92 aa11.23□□□□□ -0.61
VMA21-202ENST00000370361 ZNF324O75467 553 aaPredicted RBP11.23□□□□□ -0.61
VMA21-202ENST00000370361 NBEAP1P0C6P0 100 aa11.23□□□□□ -0.61
VMA21-202ENST00000370361 PRB4P10163 310 aaPredicted RBP11.23□□□□□ -0.61
VMA21-202ENST00000370361 LYPD1Q8N2G4 141 aa11.23□□□□□ -0.61
VMA21-202ENST00000370361 FAM167A-AS1Q96KT0 104 aa11.23□□□□□ -0.61
VMA21-202ENST00000370361 SLC25A2Q9BXI2 301 aa11.23□□□□□ -0.61
VMA21-202ENST00000370361 SMIM3Q9BZL3 60 aa11.23□□□□□ -0.61
VMA21-202ENST00000370361 KIAA1109Q2LD37 5005 aa11.23□□□□□ -0.61
VMA21-202ENST00000370361 J3KRW8 73 aa11.22□□□□□ -0.61
VMA21-202ENST00000370361 GPX1P07203 203 aa11.22□□□□□ -0.61
VMA21-202ENST00000370361 PYYP10082 97 aa11.22□□□□□ -0.61
VMA21-202ENST00000370361 TCL1AP56279 114 aa11.22□□□□□ -0.61
VMA21-202ENST00000370361 SLAQ13239 276 aa11.22□□□□□ -0.61
VMA21-202ENST00000370361 MIR17HGQ75NE6 70 aa11.22□□□□□ -0.61
VMA21-202ENST00000370361 BLNKQ8WV28 456 aa11.22□□□□□ -0.61
VMA21-202ENST00000370361 AGPAT4-IT1Q9H0P7 198 aa11.22□□□□□ -0.61
VMA21-202ENST00000370361 OR51M1Q9H341 326 aa11.22□□□□□ -0.61
VMA21-202ENST00000370361 Q9H3A6 140 aa11.22□□□□□ -0.61
VMA21-202ENST00000370361 WFDC1Q9HC57 220 aa11.22□□□□□ -0.61
VMA21-202ENST00000370361 MRPS16Q9Y3D3 137 aaKnown RBP11.22□□□□□ -0.61
VMA21-202ENST00000370361 RBAKDNA6NC62 111 aa11.21□□□□□ -0.61
VMA21-202ENST00000370361 IFNA5P01569 189 aa11.21□□□□□ -0.61
VMA21-202ENST00000370361 HOXA5P20719 270 aa11.21□□□□□ -0.61
VMA21-202ENST00000370361 CSN1S1P47710 185 aa11.21□□□□□ -0.61
VMA21-202ENST00000370361 ICAM4Q14773 271 aa11.21□□□□□ -0.61
VMA21-202ENST00000370361 RGS21Q2M5E4 152 aa11.21□□□□□ -0.61
VMA21-202ENST00000370361 Q6ZTI0 123 aa11.21□□□□□ -0.61
VMA21-202ENST00000370361 C11orf72Q8NBR9 251 aa11.21□□□□□ -0.61
VMA21-202ENST00000370361 SCGB1C1Q8TD33 95 aa11.21□□□□□ -0.61
VMA21-202ENST00000370361 PAXXQ9BUH6 204 aa11.21□□□□□ -0.61
VMA21-202ENST00000370361 TMPRSS5Q9H3S3 457 aa11.21□□□□□ -0.61
VMA21-202ENST00000370361 GSN-AS1Q9NRJ2 163 aa11.21□□□□□ -0.61
VMA21-202ENST00000370361 MUC4Q99102 2169 aa11.2□□□□□ -0.62
VMA21-202ENST00000370361 RGS13O14921 159 aa11.2□□□□□ -0.62
VMA21-202ENST00000370361 GIPP09681 153 aaPredicted RBP11.2□□□□□ -0.62
VMA21-202ENST00000370361 TNP2Q05952 138 aa11.2□□□□□ -0.62
VMA21-202ENST00000370361 ERCC8Q13216 396 aa11.2□□□□□ -0.62
VMA21-202ENST00000370361 EXOC3-AS1Q8N2X6 119 aa11.2□□□□□ -0.62
VMA21-202ENST00000370361 ASB13Q8WXK3 278 aa11.2□□□□□ -0.62
VMA21-202ENST00000370361 ZNF492Q9P255 531 aa11.2□□□□□ -0.62
VMA21-202ENST00000370361 FUT9Q9Y231 359 aa11.2□□□□□ -0.62
VMA21-202ENST00000370361 LENEPQ9Y5L5 61 aa11.2□□□□□ -0.62
VMA21-202ENST00000370361 PKD1P98161 4303 aa11.19□□□□□ -0.62
VMA21-202ENST00000370361 TRGV1A0A0A0MS02 117 aa11.19□□□□□ -0.62
VMA21-202ENST00000370361 A0A0J9YY99 117 aa11.19□□□□□ -0.62
VMA21-202ENST00000370361 C16orf90A8MZG2 172 aa11.19□□□□□ -0.62
VMA21-202ENST00000370361 SPINK4O60575 86 aa11.19□□□□□ -0.62
VMA21-202ENST00000370361 CDK2AP2O75956 126 aa11.19□□□□□ -0.62
VMA21-202ENST00000370361 RNASE4P34096 147 aaKnown RBP11.19□□□□□ -0.62
VMA21-202ENST00000370361 ZNF138P52744 262 aa11.19□□□□□ -0.62
VMA21-202ENST00000370361 TAS2R45P59539 299 aa11.19□□□□□ -0.62
VMA21-202ENST00000370361 CD300CQ08708 224 aa11.19□□□□□ -0.62
VMA21-202ENST00000370361 BTN1A1Q13410 526 aa11.19□□□□□ -0.62
VMA21-202ENST00000370361 Q5BKY6 102 aa11.19□□□□□ -0.62
VMA21-202ENST00000370361 FFAR4Q5NUL3 377 aa11.19□□□□□ -0.62
VMA21-202ENST00000370361 ZFAND2AQ8N6M9 145 aa11.19□□□□□ -0.62
VMA21-202ENST00000370361 AQP10Q96PS8 301 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms