RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 ZNF331Q9NQX6 463 aaPredicted RBP13.24□□□□□ -0.29
UBE3D-203ENST00000369747 ZFP30Q9Y2G7 519 aa13.24□□□□□ -0.29
UBE3D-203ENST00000369747 TMEM89A2RUT3 159 aa13.23□□□□□ -0.29
UBE3D-203ENST00000369747 PROK1P58294 105 aa13.23□□□□□ -0.29
UBE3D-203ENST00000369747 DAZAP1Q96EP5 407 aaKnown RBP13.23□□□□□ -0.29
UBE3D-203ENST00000369747 USMG5Q96IX5 58 aa13.23□□□□□ -0.29
UBE3D-203ENST00000369747 A8MWL6 223 aa13.23□□□□□ -0.29
UBE3D-203ENST00000369747 ZNF253O75346 499 aa13.23□□□□□ -0.29
UBE3D-203ENST00000369747 C16orf54Q6UWD8 224 aa13.23□□□□□ -0.29
UBE3D-203ENST00000369747 TCF24Q7RTU0 167 aa13.23□□□□□ -0.29
UBE3D-203ENST00000369747 MYOZ3Q8TDC0 251 aa13.23□□□□□ -0.29
UBE3D-203ENST00000369747 GTSF1Q8WW33 167 aa13.23□□□□□ -0.29
UBE3D-203ENST00000369747 LINC00310P59036 64 aa13.22□□□□□ -0.29
UBE3D-203ENST00000369747 S100A12P80511 92 aa13.22□□□□□ -0.29
UBE3D-203ENST00000369747 RELQ04864 619 aaPredicted RBP13.22□□□□□ -0.29
UBE3D-203ENST00000369747 GDF5OSQ5U4N7 250 aa13.22□□□□□ -0.29
UBE3D-203ENST00000369747 ARL6IP6Q8N6S5 226 aa13.22□□□□□ -0.29
UBE3D-203ENST00000369747 GSN-AS1Q9NRJ2 163 aa13.22□□□□□ -0.29
UBE3D-203ENST00000369747 A0A087X0K7 114 aa13.21□□□□□ -0.29
UBE3D-203ENST00000369747 A0A0G2JLM5 398 aa13.21□□□□□ -0.29
UBE3D-203ENST00000369747 SERTM2A0A1B0GWG4 89 aa13.21□□□□□ -0.29
UBE3D-203ENST00000369747 TRBV12-3P01733 135 aa13.21□□□□□ -0.29
UBE3D-203ENST00000369747 CSN1S1P47710 185 aa13.21□□□□□ -0.29
UBE3D-203ENST00000369747 Q0VG73 95 aa13.21□□□□□ -0.29
UBE3D-203ENST00000369747 KIAA1644Q3SXP7 199 aa13.21□□□□□ -0.29
UBE3D-203ENST00000369747 OR4X2Q8NGF9 303 aa13.21□□□□□ -0.29
UBE3D-203ENST00000369747 TMEM18Q96B42 140 aa13.21□□□□□ -0.29
UBE3D-203ENST00000369747 GFRA4Q9GZZ7 299 aa13.21□□□□□ -0.29
UBE3D-203ENST00000369747 A0A1B0GXF2 115 aa13.21□□□□□ -0.3
UBE3D-203ENST00000369747 APOHP02749 345 aaPredicted RBP13.21□□□□□ -0.3
UBE3D-203ENST00000369747 CD28P10747 220 aa13.21□□□□□ -0.3
UBE3D-203ENST00000369747 IGFL4Q6B9Z1 124 aa13.21□□□□□ -0.3
UBE3D-203ENST00000369747 C18orf65Q6ZTR6 163 aa13.21□□□□□ -0.3
UBE3D-203ENST00000369747 ATP5L2Q7Z4Y8 100 aa13.21□□□□□ -0.3
UBE3D-203ENST00000369747 OR4B1Q8NGF8 309 aa13.21□□□□□ -0.3
UBE3D-203ENST00000369747 IGKV2-40A0A087WW87 121 aaPredicted RBP13.2□□□□□ -0.3
UBE3D-203ENST00000369747 F2Z2F3 143 aa13.2□□□□□ -0.3
UBE3D-203ENST00000369747 IGKV2D-40P01614 121 aaPredicted RBP13.2□□□□□ -0.3
UBE3D-203ENST00000369747 HLA-DMBP28068 263 aa13.2□□□□□ -0.3
UBE3D-203ENST00000369747 SLAQ13239 276 aa13.2□□□□□ -0.3
UBE3D-203ENST00000369747 KRTAP24-1Q3LI83 254 aa13.2□□□□□ -0.3
UBE3D-203ENST00000369747 C8orf49Q96NF6 230 aa13.2□□□□□ -0.3
UBE3D-203ENST00000369747 IGHV3-66A0A0C4DH42 116 aa13.19□□□□□ -0.3
UBE3D-203ENST00000369747 CHEK1O14757 476 aa13.19□□□□□ -0.3
UBE3D-203ENST00000369747 APCSP02743 223 aa13.19□□□□□ -0.3
UBE3D-203ENST00000369747 CRIP1P50238 77 aa13.19□□□□□ -0.3
UBE3D-203ENST00000369747 KHDC1LQ5JSQ8 128 aa13.19□□□□□ -0.3
UBE3D-203ENST00000369747 UBE2E2Q96LR5 201 aa13.19□□□□□ -0.3
UBE3D-203ENST00000369747 METTL26Q96S19 204 aa13.19□□□□□ -0.3
UBE3D-203ENST00000369747 U3KQE9 123 aa13.19□□□□□ -0.3
UBE3D-203ENST00000369747 IGHV3OR16-13A0A075B7E8 117 aa13.19□□□□□ -0.3
UBE3D-203ENST00000369747 IGHV3-74A0A0B4J1X5 117 aa13.19□□□□□ -0.3
UBE3D-203ENST00000369747 FAM231BA6NCW3 169 aa13.19□□□□□ -0.3
UBE3D-203ENST00000369747 ZNF207O43670 478 aaKnown RBP13.19□□□□□ -0.3
UBE3D-203ENST00000369747 SERF1AO75920 110 aa13.19□□□□□ -0.3
UBE3D-203ENST00000369747 ESDP10768 282 aa13.19□□□□□ -0.3
UBE3D-203ENST00000369747 KRTAP10-3P60369 221 aa13.19□□□□□ -0.3
UBE3D-203ENST00000369747 JOSD1Q15040 202 aaPredicted RBP13.19□□□□□ -0.3
UBE3D-203ENST00000369747 DNLZQ5SXM8 178 aa13.19□□□□□ -0.3
UBE3D-203ENST00000369747 C1orf194Q5T5A4 169 aa13.19□□□□□ -0.3
UBE3D-203ENST00000369747 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.19□□□□□ -0.3
UBE3D-203ENST00000369747 OR2D3Q8NGH3 330 aa13.19□□□□□ -0.3
UBE3D-203ENST00000369747 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.18□□□□□ -0.3
UBE3D-203ENST00000369747 GZMBP10144 247 aa13.18□□□□□ -0.3
UBE3D-203ENST00000369747 ARL3P36405 182 aa13.18□□□□□ -0.3
UBE3D-203ENST00000369747 RBPMS2Q6ZRY4 209 aaKnown RBP13.18□□□□□ -0.3
UBE3D-203ENST00000369747 PGLYRP4Q96LB8 373 aa13.18□□□□□ -0.3
UBE3D-203ENST00000369747 CITED2Q99967 270 aaPredicted RBP13.18□□□□□ -0.3
UBE3D-203ENST00000369747 ZNF705FA8MVS1 300 aaPredicted RBP13.17□□□□□ -0.3
UBE3D-203ENST00000369747 COL6A5A8TX70 2615 aa13.17□□□□□ -0.3
UBE3D-203ENST00000369747 SRIP30626 198 aa13.17□□□□□ -0.3
UBE3D-203ENST00000369747 CAMPP49913 170 aa13.17□□□□□ -0.3
UBE3D-203ENST00000369747 BAGE3Q86Y29 109 aa13.17□□□□□ -0.3
UBE3D-203ENST00000369747 IGHV3-49A0A0A0MS15 119 aa13.17□□□□□ -0.3
UBE3D-203ENST00000369747 OR10J3Q5JRS4 329 aa13.17□□□□□ -0.3
UBE3D-203ENST00000369747 HBBP68871 147 aa13.16□□□□□ -0.3
UBE3D-203ENST00000369747 DEFB136Q30KP8 78 aa13.16□□□□□ -0.3
UBE3D-203ENST00000369747 LCN12Q6JVE5 192 aa13.16□□□□□ -0.3
UBE3D-203ENST00000369747 COX8CQ7Z4L0 72 aa13.16□□□□□ -0.3
UBE3D-203ENST00000369747 VGLL1Q99990 258 aa13.16□□□□□ -0.3
UBE3D-203ENST00000369747 SSBP4Q9BWG4 385 aaPredicted RBP13.16□□□□□ -0.3
UBE3D-203ENST00000369747 A0A1W2PRX2 142 aa13.15□□□□□ -0.3
UBE3D-203ENST00000369747 LGALS1P09382 135 aaKnown RBP13.15□□□□□ -0.3
UBE3D-203ENST00000369747 FOXA3P55318 350 aaPredicted RBP13.15□□□□□ -0.3
UBE3D-203ENST00000369747 WFDC12Q8WWY7 111 aa13.15□□□□□ -0.3
UBE3D-203ENST00000369747 PRR25Q96S07 402 aa13.15□□□□□ -0.3
UBE3D-203ENST00000369747 PEF1Q9UBV8 284 aaKnown RBP13.15□□□□□ -0.3
UBE3D-203ENST00000369747 STAB1Q9NY15 2570 aa13.15□□□□□ -0.3
UBE3D-203ENST00000369747 FBLL1A6NHQ2 334 aaKnown RBP13.15□□□□□ -0.3
UBE3D-203ENST00000369747 KLHL30-AS1Q8NEE0 82 aa13.15□□□□□ -0.3
UBE3D-203ENST00000369747 SLC50A1Q9BRV3 221 aa13.15□□□□□ -0.3
UBE3D-203ENST00000369747 VWFP04275 2813 aa13.14□□□□□ -0.31
UBE3D-203ENST00000369747 CT45A10P0DMU9 189 aa13.14□□□□□ -0.31
UBE3D-203ENST00000369747 UNQ9165/PRO28630Q6UXU0 137 aa13.14□□□□□ -0.31
UBE3D-203ENST00000369747 RNF182Q8N6D2 247 aa13.14□□□□□ -0.31
UBE3D-203ENST00000369747 Q8TAT8 98 aa13.14□□□□□ -0.31
UBE3D-203ENST00000369747 RCHY1Q96PM5 261 aa13.14□□□□□ -0.31
UBE3D-203ENST00000369747 A8MWP6 167 aa13.13□□□□□ -0.31
UBE3D-203ENST00000369747 PRAC2D3DTV9 90 aa13.13□□□□□ -0.31
UBE3D-203ENST00000369747 NDUFA4O00483 81 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms