RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 RPL23P62829 140 aaKnown RBP13.74□□□□□ -0.21
LMNA-204ENST00000368298 C11orf52Q96A22 123 aa13.74□□□□□ -0.21
LMNA-204ENST00000368298 ISOC2Q96AB3 205 aa13.74□□□□□ -0.21
LMNA-204ENST00000368298 C20orf173Q96LM9 149 aa13.74□□□□□ -0.21
LMNA-204ENST00000368298 CLUHP3Q96NS8 147 aa13.74□□□□□ -0.21
LMNA-204ENST00000368298 SLC50A1Q9BRV3 221 aa13.74□□□□□ -0.21
LMNA-204ENST00000368298 SAV1Q9H4B6 383 aaPredicted RBP13.74□□□□□ -0.21
LMNA-204ENST00000368298 ZMAT4Q9H898 229 aa13.74□□□□□ -0.21
LMNA-204ENST00000368298 ZNF331Q9NQX6 463 aaPredicted RBP13.74□□□□□ -0.21
LMNA-204ENST00000368298 H3BMM0 161 aa13.73□□□□□ -0.21
LMNA-204ENST00000368298 ZNF253O75346 499 aa13.73□□□□□ -0.21
LMNA-204ENST00000368298 HIST1H1EP10412 219 aaKnown RBP13.73□□□□□ -0.21
LMNA-204ENST00000368298 HLA-DRB4P13762 266 aa13.73□□□□□ -0.21
LMNA-204ENST00000368298 RPL35AP18077 110 aaKnown RBP13.73□□□□□ -0.21
LMNA-204ENST00000368298 ACTL10Q5JWF8 245 aa13.73□□□□□ -0.21
LMNA-204ENST00000368298 FOXI2Q6ZQN5 318 aa13.73□□□□□ -0.21
LMNA-204ENST00000368298 Q6ZWC4 215 aa13.73□□□□□ -0.21
LMNA-204ENST00000368298 CSTL1Q9H114 145 aa13.73□□□□□ -0.21
LMNA-204ENST00000368298 HLA-DRB4X5D2U9 266 aa13.73□□□□□ -0.21
LMNA-204ENST00000368298 AGRNO00468 2067 aa13.72□□□□□ -0.21
LMNA-204ENST00000368298 A0A1W2PRE2 83 aa13.72□□□□□ -0.21
LMNA-204ENST00000368298 FXYD5Q96DB9 178 aa13.72□□□□□ -0.21
LMNA-204ENST00000368298 DERL1Q9BUN8 251 aa13.72□□□□□ -0.21
LMNA-204ENST00000368298 ZNF586Q9NXT0 402 aa13.72□□□□□ -0.21
LMNA-204ENST00000368298 CLEC5AQ9NY25 188 aa13.72□□□□□ -0.21
LMNA-204ENST00000368298 TRBV19A0A075B6N1 114 aa13.71□□□□□ -0.21
LMNA-204ENST00000368298 PDE6HQ13956 83 aa13.71□□□□□ -0.21
LMNA-204ENST00000368298 MORN3Q6PF18 240 aaPredicted RBP13.71□□□□□ -0.21
LMNA-204ENST00000368298 HIST1H2BAQ96A08 127 aa13.71□□□□□ -0.21
LMNA-204ENST00000368298 TP53TG1Q9Y2A0 90 aa13.71□□□□□ -0.21
LMNA-204ENST00000368298 U3KQK5 164 aa13.71□□□□□ -0.21
LMNA-204ENST00000368298 A0A0J9YX75 114 aa13.7□□□□□ -0.22
LMNA-204ENST00000368298 GGTLC3B5MD39 225 aa13.7□□□□□ -0.22
LMNA-204ENST00000368298 PSG3Q16557 428 aa13.7□□□□□ -0.22
LMNA-204ENST00000368298 RNF212Q495C1 297 aa13.7□□□□□ -0.22
LMNA-204ENST00000368298 GDF5OSQ5U4N7 250 aa13.7□□□□□ -0.22
LMNA-204ENST00000368298 IGFL4Q6B9Z1 124 aa13.7□□□□□ -0.22
LMNA-204ENST00000368298 RNF182Q8N6D2 247 aa13.7□□□□□ -0.22
LMNA-204ENST00000368298 NBEAL2Q6ZNJ1 2754 aa13.69□□□□□ -0.22
LMNA-204ENST00000368298 SLC17A3O00476 420 aa13.69□□□□□ -0.22
LMNA-204ENST00000368298 SUMO1P63165 101 aaKnown RBP13.69□□□□□ -0.22
LMNA-204ENST00000368298 EBLN2Q6P2I7 272 aa13.69□□□□□ -0.22
LMNA-204ENST00000368298 YPEL4Q96NS1 127 aa13.69□□□□□ -0.22
LMNA-204ENST00000368298 RCHY1Q96PM5 261 aa13.69□□□□□ -0.22
LMNA-204ENST00000368298 CTDSP1Q9GZU7 261 aa13.69□□□□□ -0.22
LMNA-204ENST00000368298 PRELID1Q9Y255 219 aa13.69□□□□□ -0.22
LMNA-204ENST00000368298 A8MTW9 85 aa13.68□□□□□ -0.22
LMNA-204ENST00000368298 MT-ND4LP03901 98 aa13.68□□□□□ -0.22
LMNA-204ENST00000368298 SNRPCP09234 159 aaKnown RBP13.68□□□□□ -0.22
LMNA-204ENST00000368298 GIG44P09565 113 aaPredicted RBP13.68□□□□□ -0.22
LMNA-204ENST00000368298 NBEAP1P0C6P0 100 aa13.68□□□□□ -0.22
LMNA-204ENST00000368298 DEFB1P60022 68 aa13.68□□□□□ -0.22
LMNA-204ENST00000368298 TENM3Q9P273 2699 aa13.68□□□□□ -0.22
LMNA-204ENST00000368298 CXorf65A6NEN9 183 aa13.67□□□□□ -0.22
LMNA-204ENST00000368298 H3BTX0 84 aa13.67□□□□□ -0.22
LMNA-204ENST00000368298 HLA-DMBP28068 263 aa13.67□□□□□ -0.22
LMNA-204ENST00000368298 RNF183Q96D59 192 aa13.67□□□□□ -0.22
LMNA-204ENST00000368298 OVOL2Q9BRP0 275 aa13.67□□□□□ -0.22
LMNA-204ENST00000368298 TMEM242Q9NWH2 141 aa13.67□□□□□ -0.22
LMNA-204ENST00000368298 F6UB75 175 aa13.67□□□□□ -0.22
LMNA-204ENST00000368298 NUTF2P61970 127 aaKnown RBP13.67□□□□□ -0.22
LMNA-204ENST00000368298 PSG9Q00887 426 aa13.67□□□□□ -0.22
LMNA-204ENST00000368298 LINC01551Q86U37 167 aa13.67□□□□□ -0.22
LMNA-204ENST00000368298 ZNF738Q8NE65 137 aa13.67□□□□□ -0.22
LMNA-204ENST00000368298 BLNKQ8WV28 456 aa13.67□□□□□ -0.22
LMNA-204ENST00000368298 C2CD4CQ8TF44 421 aa13.66□□□□□ -0.22
LMNA-204ENST00000368298 MRPL53Q96EL3 112 aaKnown RBP13.66□□□□□ -0.22
LMNA-204ENST00000368298 RETNQ9HD89 108 aa13.66□□□□□ -0.22
LMNA-204ENST00000368298 TRBV20OR9-2A0A075B6H5 130 aa13.65□□□□□ -0.22
LMNA-204ENST00000368298 PGPEP1LA6NFU8 196 aa13.65□□□□□ -0.22
LMNA-204ENST00000368298 C9JCJ5 164 aa13.65□□□□□ -0.22
LMNA-204ENST00000368298 SPRY2O43597 315 aa13.65□□□□□ -0.22
LMNA-204ENST00000368298 DUSP14O95147 198 aaKnown RBP13.65□□□□□ -0.22
LMNA-204ENST00000368298 CA1P00915 261 aaPredicted RBP13.65□□□□□ -0.22
LMNA-204ENST00000368298 RPL35P42766 123 aaKnown RBP13.65□□□□□ -0.22
LMNA-204ENST00000368298 DEFB135Q30KP9 77 aa13.65□□□□□ -0.22
LMNA-204ENST00000368298 ANAPC16Q96DE5 110 aa13.65□□□□□ -0.22
LMNA-204ENST00000368298 HUWE1Q7Z6Z7 4374 aaKnown RBP13.65□□□□□ -0.22
LMNA-204ENST00000368298 STAB2Q8WWQ8 2551 aa13.64□□□□□ -0.23
LMNA-204ENST00000368298 H7BYZ3 331 aa13.64□□□□□ -0.23
LMNA-204ENST00000368298 RAB5AP20339 215 aa13.64□□□□□ -0.23
LMNA-204ENST00000368298 ELOBQ15370 118 aa13.64□□□□□ -0.23
LMNA-204ENST00000368298 LYPD1Q8N2G4 141 aa13.64□□□□□ -0.23
LMNA-204ENST00000368298 CSNK1G2-AS1Q8NCQ2 148 aa13.64□□□□□ -0.23
LMNA-204ENST00000368298 OR8A1Q8NGG7 326 aa13.64□□□□□ -0.23
LMNA-204ENST00000368298 LY96Q9Y6Y9 160 aa13.64□□□□□ -0.23
LMNA-204ENST00000368298 URGCP-MRPS24S4R325 110 aa13.64□□□□□ -0.23
LMNA-204ENST00000368298 LOC105371267A0A1B0GV96 52 aa13.63□□□□□ -0.23
LMNA-204ENST00000368298 CNN1P51911 297 aaKnown RBP13.63□□□□□ -0.23
LMNA-204ENST00000368298 RANP62826 216 aaKnown RBP13.63□□□□□ -0.23
LMNA-204ENST00000368298 AMTNQ6UX39 209 aa13.63□□□□□ -0.23
LMNA-204ENST00000368298 OR4B1Q8NGF8 309 aa13.63□□□□□ -0.23
LMNA-204ENST00000368298 OCC1Q8TAD7 63 aa13.63□□□□□ -0.23
LMNA-204ENST00000368298 C1QTNF4Q9BXJ3 329 aa13.63□□□□□ -0.23
LMNA-204ENST00000368298 ZNF705FA8MVS1 300 aaPredicted RBP13.62□□□□□ -0.23
LMNA-204ENST00000368298 PEX7O00628 323 aa13.62□□□□□ -0.23
LMNA-204ENST00000368298 SLC25A5P05141 298 aaKnown RBP13.62□□□□□ -0.23
LMNA-204ENST00000368298 CENPWQ5EE01 88 aa13.62□□□□□ -0.23
LMNA-204ENST00000368298 TCEAL7Q9BRU2 100 aa13.62□□□□□ -0.23
LMNA-204ENST00000368298 AAMDCQ9H7C9 122 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms