RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 IL18BPO95998 194 aa5.95□□□□□ -1.46
SYNE1-208ENST00000367256 NDUFS5O43920 106 aa5.95□□□□□ -1.46
SYNE1-208ENST00000367256 VPREB1P12018 145 aa5.95□□□□□ -1.46
SYNE1-208ENST00000367256 DEFB121Q5J5C9 76 aa5.95□□□□□ -1.46
SYNE1-208ENST00000367256 ZCCHC24Q8N2G6 241 aaKnown RBP5.95□□□□□ -1.46
SYNE1-208ENST00000367256 RNF166Q96A37 237 aaPredicted RBP5.95□□□□□ -1.46
SYNE1-208ENST00000367256 TMEM258P61165 79 aa5.95□□□□□ -1.46
SYNE1-208ENST00000367256 STPG4Q8N801 248 aa5.95□□□□□ -1.46
SYNE1-208ENST00000367256 TRAV3A0A0B4J244 114 aa5.95□□□□□ -1.46
SYNE1-208ENST00000367256 C8orf49Q96NF6 230 aa5.95□□□□□ -1.46
SYNE1-208ENST00000367256 RNF114Q9Y508 228 aa5.95□□□□□ -1.46
SYNE1-208ENST00000367256 M0R1W7 72 aa5.94□□□□□ -1.46
SYNE1-208ENST00000367256 IGLC2P0DOY2 106 aa5.94□□□□□ -1.46
SYNE1-208ENST00000367256 IGLC3P0DOY3 106 aa5.94□□□□□ -1.46
SYNE1-208ENST00000367256 TRBV25-1A0A075B6N4 114 aa5.94□□□□□ -1.46
SYNE1-208ENST00000367256 PFN1P07737 140 aaKnown RBP5.94□□□□□ -1.46
SYNE1-208ENST00000367256 COX8AP10176 69 aa5.94□□□□□ -1.46
SYNE1-208ENST00000367256 C20orf204Q6ZNR8 217 aa5.94□□□□□ -1.46
SYNE1-208ENST00000367256 IGKV1-27A0A075B6S5 117 aa5.94□□□□□ -1.46
SYNE1-208ENST00000367256 YPEL3P61236 119 aaPredicted RBP5.94□□□□□ -1.46
SYNE1-208ENST00000367256 C18orf32Q8TCD1 76 aa5.94□□□□□ -1.46
SYNE1-208ENST00000367256 GPR179Q6PRD1 2367 aa5.94□□□□□ -1.46
SYNE1-208ENST00000367256 PIP4P2Q8N4L2 257 aa5.94□□□□□ -1.46
SYNE1-208ENST00000367256 SHANK2-AS3Q9BTD1 123 aa5.94□□□□□ -1.46
SYNE1-208ENST00000367256 C15orf62A8K5M9 175 aa5.94□□□□□ -1.46
SYNE1-208ENST00000367256 K7EP13 123 aa5.94□□□□□ -1.46
SYNE1-208ENST00000367256 MST1LQ2TV78 715 aa5.94□□□□□ -1.46
SYNE1-208ENST00000367256 BUB1B-PAK6H3BSN5 160 aa5.94□□□□□ -1.46
SYNE1-208ENST00000367256 DKK1O94907 266 aa5.94□□□□□ -1.46
SYNE1-208ENST00000367256 UBE2E2Q96LR5 201 aa5.94□□□□□ -1.46
SYNE1-208ENST00000367256 DSCAML1Q8TD84 2053 aa5.94□□□□□ -1.46
SYNE1-208ENST00000367256 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.94□□□□□ -1.46
SYNE1-208ENST00000367256 SLAQ13239 276 aa5.94□□□□□ -1.46
SYNE1-208ENST00000367256 MORN5Q5VZ52 161 aa5.94□□□□□ -1.46
SYNE1-208ENST00000367256 C2CD3Q4AC94 2353 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 SHISA9B4DS77 424 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 CFHR1Q03591 330 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 FOXF2Q12947 444 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 IGFL4Q6B9Z1 124 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 ADAMTS9Q9P2N4 1935 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 CFHR2P36980 270 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 CARD19Q96LW7 228 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 TRAV12-1A0A0B4J245 112 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 IGKV1-12A0A0C4DH73 117 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 PRSS46E5RG02 174 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 K7EMI3 77 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 IGKV1D-12P01611 117 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 CD177Q8N6Q3 437 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 FLVCR1-AS1Q8TAF5 88 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 LIME1Q9H400 295 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 TMEM178BH3BS89 294 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 SLX1AQ9BQ83 275 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 NDUFB8O95169 186 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 F5H768 121 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 H3BUX3 64 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 RHODO00212 210 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 MCRIP2Q9BUT9 160 aaKnown RBP5.93□□□□□ -1.46
SYNE1-208ENST00000367256 CLPSL1A2RUU4 121 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 E9PLN8 166 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 PFN2P35080 140 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 HAMPP81172 84 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 LGALS9BQ3B8N2 356 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 LGALS9CQ6DKI2 356 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 BRD3OSQ6XYD6 125 aa5.93□□□□□ -1.46
SYNE1-208ENST00000367256 COL4A5P29400 1685 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 EFNA4P52798 201 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 CFHR3Q02985 330 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 LTBP1Q14766 1721 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 CGB3P0DN86 165 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 PNRC2Q9NPJ4 139 aaKnown RBP5.92□□□□□ -1.46
SYNE1-208ENST00000367256 SCRT2Q9NQ03 307 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 DAD1P61803 113 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 HGFACQ04756 655 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 TRAV13-2A0A0B4J235 113 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 B4DSR2 109 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 RHPN1-AS1Q9BWJ2 59 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 A0A1W2PPM0 123 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 FOXG1P55316 489 aaPredicted RBP5.92□□□□□ -1.46
SYNE1-208ENST00000367256 TECTAO75443 2155 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 LINC00473A8K010 186 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 K7ERJ3 54 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 HLA-DMBP28068 263 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 Q8N8P6 123 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 TSSC4Q9Y5U2 329 aaPredicted RBP5.92□□□□□ -1.46
SYNE1-208ENST00000367256 KLK9Q9UKQ9 250 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 SMIM27A0A1W2PRY6 76 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 PRSS29PA6NIE9 313 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 GAFA1Q96PS6 74 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 TMEM14BQ9NUH8 114 aa5.92□□□□□ -1.46
SYNE1-208ENST00000367256 NTF4P34130 210 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 ZNF672Q499Z4 452 aaPredicted RBP5.91□□□□□ -1.46
SYNE1-208ENST00000367256 BDP1A6H8Y1 2624 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 ARMS2P0C7Q2 107 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 FAM104BQ5XKR9 115 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 CEND1Q8N111 149 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 SIGLEC9Q9Y336 463 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 GAGE12HA6NDE8 117 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 Q6P435 159 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 C11orf52Q96A22 123 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 KLHDC3Q9BQ90 382 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms