RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 IGKV2D-24A0A075B6R9 120 aa8.41□□□□□ -1.06
CACNA1S-201ENST00000362061 LINC01551Q86U37 167 aa8.41□□□□□ -1.06
CACNA1S-201ENST00000362061 C5orf30Q96GV9 206 aa8.41□□□□□ -1.06
CACNA1S-201ENST00000362061 IGKV1OR2-108A0A075B7D4 117 aa8.41□□□□□ -1.06
CACNA1S-201ENST00000362061 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.41□□□□□ -1.06
CACNA1S-201ENST00000362061 TRAV8-2A0A0B4J237 113 aa8.41□□□□□ -1.06
CACNA1S-201ENST00000362061 FHL1Q13642 323 aa8.41□□□□□ -1.06
CACNA1S-201ENST00000362061 DAZAP2Q15038 168 aaPredicted RBP8.41□□□□□ -1.06
CACNA1S-201ENST00000362061 TRAV1-1A0A0B4J248 108 aa8.4□□□□□ -1.06
CACNA1S-201ENST00000362061 H3BUT2 72 aa8.4□□□□□ -1.06
CACNA1S-201ENST00000362061 LINC00479Q96M42 142 aa8.4□□□□□ -1.06
CACNA1S-201ENST00000362061 CTSZQ9UBR2 303 aa8.4□□□□□ -1.06
CACNA1S-201ENST00000362061 ZGRF1Q86YA3 2104 aa8.4□□□□□ -1.06
CACNA1S-201ENST00000362061 TRBV19A0A075B6N1 114 aa8.4□□□□□ -1.06
CACNA1S-201ENST00000362061 ANXA2RQ3ZCQ2 193 aa8.4□□□□□ -1.06
CACNA1S-201ENST00000362061 TMEM75Q8N9X5 138 aa8.4□□□□□ -1.06
CACNA1S-201ENST00000362061 ZNF625Q96I27 306 aaPredicted RBP8.4□□□□□ -1.06
CACNA1S-201ENST00000362061 C8orf49Q96NF6 230 aa8.4□□□□□ -1.06
CACNA1S-201ENST00000362061 Q9HAA7 133 aa8.4□□□□□ -1.06
CACNA1S-201ENST00000362061 ATP6V0BQ99437 205 aa8.4□□□□□ -1.07
CACNA1S-201ENST00000362061 ACACBO00763 2458 aa8.4□□□□□ -1.07
CACNA1S-201ENST00000362061 SLURP1P55000 103 aa8.4□□□□□ -1.07
CACNA1S-201ENST00000362061 RPL32P62910 135 aaKnown RBP8.4□□□□□ -1.07
CACNA1S-201ENST00000362061 FOXE3Q13461 319 aa8.4□□□□□ -1.07
CACNA1S-201ENST00000362061 NOP10Q9NPE3 64 aaKnown RBP8.4□□□□□ -1.07
CACNA1S-201ENST00000362061 I3L3M4 83 aa8.39□□□□□ -1.07
CACNA1S-201ENST00000362061 CENPVL3A0A0U1RRI6 287 aa8.39□□□□□ -1.07
CACNA1S-201ENST00000362061 VWC2LB2RUY7 222 aa8.39□□□□□ -1.07
CACNA1S-201ENST00000362061 SPAG8Q99932 426 aaPredicted RBP8.39□□□□□ -1.07
CACNA1S-201ENST00000362061 C15orf65H3BRN8 121 aa8.39□□□□□ -1.07
CACNA1S-201ENST00000362061 PFN2P35080 140 aa8.39□□□□□ -1.07
CACNA1S-201ENST00000362061 WT1-ASQ06250 92 aa8.39□□□□□ -1.07
CACNA1S-201ENST00000362061 TMEM242Q9NWH2 141 aa8.39□□□□□ -1.07
CACNA1S-201ENST00000362061 ZNF134P52741 427 aa8.39□□□□□ -1.07
CACNA1S-201ENST00000362061 CCL18P55774 89 aa8.39□□□□□ -1.07
CACNA1S-201ENST00000362061 PMVKQ15126 192 aa8.38□□□□□ -1.07
CACNA1S-201ENST00000362061 LY96Q9Y6Y9 160 aa8.38□□□□□ -1.07
CACNA1S-201ENST00000362061 IGKV1-39P01597 117 aa8.38□□□□□ -1.07
CACNA1S-201ENST00000362061 IGKV1D-39P04432 117 aa8.38□□□□□ -1.07
CACNA1S-201ENST00000362061 UBE2BP63146 152 aa8.38□□□□□ -1.07
CACNA1S-201ENST00000362061 FOXI2Q6ZQN5 318 aa8.38□□□□□ -1.07
CACNA1S-201ENST00000362061 CUL9Q8IWT3 2517 aa8.38□□□□□ -1.07
CACNA1S-201ENST00000362061 KLF5Q13887 457 aaPredicted RBP8.38□□□□□ -1.07
CACNA1S-201ENST00000362061 DMRT1Q9Y5R6 373 aa8.38□□□□□ -1.07
CACNA1S-201ENST00000362061 TNFRSF6BO95407 300 aa8.38□□□□□ -1.07
CACNA1S-201ENST00000362061 CLPSL2Q6UWE3 100 aa8.38□□□□□ -1.07
CACNA1S-201ENST00000362061 TP53TG1Q9Y2A0 90 aa8.38□□□□□ -1.07
CACNA1S-201ENST00000362061 BLCAPP62952 87 aa8.37□□□□□ -1.07
CACNA1S-201ENST00000362061 KLF12Q9Y4X4 402 aa8.37□□□□□ -1.07
CACNA1S-201ENST00000362061 PLXNA3P51805 1871 aa8.37□□□□□ -1.07
CACNA1S-201ENST00000362061 GTF3C1Q12789 2109 aa8.37□□□□□ -1.07
CACNA1S-201ENST00000362061 H3BRN7 92 aa8.37□□□□□ -1.07
CACNA1S-201ENST00000362061 APRG1Q8IVJ8 170 aa8.37□□□□□ -1.07
CACNA1S-201ENST00000362061 IGFBPL1Q8WX77 278 aa8.37□□□□□ -1.07
CACNA1S-201ENST00000362061 SNHG12Q9BXW3 62 aa8.37□□□□□ -1.07
CACNA1S-201ENST00000362061 RHOHQ15669 191 aa8.37□□□□□ -1.07
CACNA1S-201ENST00000362061 CYTL1Q9NRR1 136 aa8.37□□□□□ -1.07
CACNA1S-201ENST00000362061 LAMTOR2Q9Y2Q5 125 aa8.37□□□□□ -1.07
CACNA1S-201ENST00000362061 PRSS29PA6NIE9 313 aa8.37□□□□□ -1.07
CACNA1S-201ENST00000362061 NXPH4O95158 308 aa8.37□□□□□ -1.07
CACNA1S-201ENST00000362061 WDR81Q562E7 1941 aa8.37□□□□□ -1.07
CACNA1S-201ENST00000362061 OR11H6Q8NGC7 330 aa8.36□□□□□ -1.07
CACNA1S-201ENST00000362061 ZNF524Q96C55 264 aa8.36□□□□□ -1.07
CACNA1S-201ENST00000362061 DOCK9Q9BZ29 2069 aa8.36□□□□□ -1.07
CACNA1S-201ENST00000362061 TMEM213A2RRL7 107 aa8.36□□□□□ -1.07
CACNA1S-201ENST00000362061 RLFQ13129 1914 aa8.36□□□□□ -1.07
CACNA1S-201ENST00000362061 TEX48A0A1B0GUV7 120 aa8.36□□□□□ -1.07
CACNA1S-201ENST00000362061 SDHAF1A6NFY7 115 aa8.36□□□□□ -1.07
CACNA1S-201ENST00000362061 SPART-AS1P0CW21 52 aa8.36□□□□□ -1.07
CACNA1S-201ENST00000362061 ZNF114Q8NC26 417 aa8.36□□□□□ -1.07
CACNA1S-201ENST00000362061 CLPSL1A2RUU4 121 aa8.36□□□□□ -1.07
CACNA1S-201ENST00000362061 TMEM256Q8N2U0 113 aa8.36□□□□□ -1.07
CACNA1S-201ENST00000362061 PRORYQ9H606 182 aa8.36□□□□□ -1.07
CACNA1S-201ENST00000362061 GSN-AS1Q9NRJ2 163 aa8.36□□□□□ -1.07
CACNA1S-201ENST00000362061 MALRD1Q5VYJ5 2156 aa8.36□□□□□ -1.07
CACNA1S-201ENST00000362061 ZFP36P26651 326 aaKnown RBP8.36□□□□□ -1.07
CACNA1S-201ENST00000362061 ORAOV1Q8WV07 137 aa8.36□□□□□ -1.07
CACNA1S-201ENST00000362061 HIVEP2P31629 2446 aa8.36□□□□□ -1.07
CACNA1S-201ENST00000362061 HLA-DRB4P13762 266 aa8.35□□□□□ -1.07
CACNA1S-201ENST00000362061 OTOGLQ3ZCN5 2332 aa8.35□□□□□ -1.07
CACNA1S-201ENST00000362061 HLA-DRB4X5D2U9 266 aa8.35□□□□□ -1.07
CACNA1S-201ENST00000362061 ATRAIDQ6UW56 229 aa8.35□□□□□ -1.07
CACNA1S-201ENST00000362061 ZNF479Q96JC4 524 aa8.35□□□□□ -1.07
CACNA1S-201ENST00000362061 PRR25Q96S07 402 aa8.35□□□□□ -1.07
CACNA1S-201ENST00000362061 GFRA4Q9GZZ7 299 aa8.35□□□□□ -1.07
CACNA1S-201ENST00000362061 KLK5Q9Y337 293 aaPredicted RBP8.35□□□□□ -1.07
CACNA1S-201ENST00000362061 SMAD5-AS1Q9Y6J3 95 aa8.35□□□□□ -1.07
CACNA1S-201ENST00000362061 F6UB75 175 aa8.35□□□□□ -1.07
CACNA1S-201ENST00000362061 H3BMM0 161 aa8.35□□□□□ -1.07
CACNA1S-201ENST00000362061 UBE2WQ96B02 151 aa8.35□□□□□ -1.07
CACNA1S-201ENST00000362061 C1orf43Q9BWL3 253 aa8.35□□□□□ -1.07
CACNA1S-201ENST00000362061 U3KQE9 123 aa8.35□□□□□ -1.07
CACNA1S-201ENST00000362061 IGLC1P0CG04 106 aa8.34□□□□□ -1.07
CACNA1S-201ENST00000362061 RSPO1Q2MKA7 263 aaPredicted RBP8.34□□□□□ -1.07
CACNA1S-201ENST00000362061 CITED2Q99967 270 aaPredicted RBP8.34□□□□□ -1.07
CACNA1S-201ENST00000362061 CHAC1Q9BUX1 264 aa8.34□□□□□ -1.07
CACNA1S-201ENST00000362061 HSD52Q0P140 79 aa8.34□□□□□ -1.07
CACNA1S-201ENST00000362061 ZC2HC1BQ5TFG8 222 aa8.34□□□□□ -1.07
CACNA1S-201ENST00000362061 MRPL53Q96EL3 112 aaKnown RBP8.34□□□□□ -1.07
CACNA1S-201ENST00000362061 FNDC4Q9H6D8 234 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms