RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 C11orf94C9JXX5 98 aa7.97□□□□□ -1.13
SNX6-201ENST00000362031 IGKV2D-40P01614 121 aaPredicted RBP7.97□□□□□ -1.13
SNX6-201ENST00000362031 RAB5BP61020 215 aa7.97□□□□□ -1.13
SNX6-201ENST00000362031 PSG9Q00887 426 aa7.97□□□□□ -1.13
SNX6-201ENST00000362031 ERCC8Q13216 396 aa7.97□□□□□ -1.13
SNX6-201ENST00000362031 DEFB125Q8N687 156 aa7.97□□□□□ -1.13
SNX6-201ENST00000362031 ZNF738Q8NE65 137 aa7.97□□□□□ -1.13
SNX6-201ENST00000362031 RPUSD4Q96CM3 377 aaKnown RBP7.97□□□□□ -1.13
SNX6-201ENST00000362031 VGLL1Q99990 258 aa7.97□□□□□ -1.13
SNX6-201ENST00000362031 TRAV8-1A0A0A6YYK1 113 aa7.96□□□□□ -1.13
SNX6-201ENST00000362031 SCO2A0A1W2PP80 73 aa7.96□□□□□ -1.13
SNX6-201ENST00000362031 APOC3P02656 99 aa7.96□□□□□ -1.13
SNX6-201ENST00000362031 SLC25A5P05141 298 aaKnown RBP7.96□□□□□ -1.13
SNX6-201ENST00000362031 LYPD1Q8N2G4 141 aa7.96□□□□□ -1.13
SNX6-201ENST00000362031 DERL1Q9BUN8 251 aa7.96□□□□□ -1.13
SNX6-201ENST00000362031 DNAH9Q9NYC9 4486 aa7.96□□□□□ -1.14
SNX6-201ENST00000362031 TRAV34A0A0B4J273 112 aa7.96□□□□□ -1.14
SNX6-201ENST00000362031 DIRC3C9JPN6 131 aa7.96□□□□□ -1.14
SNX6-201ENST00000362031 LINC00614P0C842 121 aa7.96□□□□□ -1.14
SNX6-201ENST00000362031 SNRPD3P62318 126 aaKnown RBP7.96□□□□□ -1.14
SNX6-201ENST00000362031 MEF2BQ02080 365 aaPredicted RBP7.96□□□□□ -1.14
SNX6-201ENST00000362031 ZNF506Q5JVG8 444 aa7.96□□□□□ -1.14
SNX6-201ENST00000362031 ATRAIDQ6UW56 229 aa7.96□□□□□ -1.14
SNX6-201ENST00000362031 GOLT1AQ6ZVE7 132 aa7.96□□□□□ -1.14
SNX6-201ENST00000362031 AAMDCQ9H7C9 122 aa7.96□□□□□ -1.14
SNX6-201ENST00000362031 MANBALQ9NQG1 85 aa7.96□□□□□ -1.14
SNX6-201ENST00000362031 EPDR1Q9UM22 224 aa7.96□□□□□ -1.14
SNX6-201ENST00000362031 TENM3Q9P273 2699 aa7.95□□□□□ -1.14
SNX6-201ENST00000362031 RBMY1BA6NDE4 496 aaKnown RBP7.95□□□□□ -1.14
SNX6-201ENST00000362031 RBMY1EA6NEQ0 496 aaKnown RBP7.95□□□□□ -1.14
SNX6-201ENST00000362031 IGLV2-11P01706 119 aa7.95□□□□□ -1.14
SNX6-201ENST00000362031 TCRAP04437 139 aa7.95□□□□□ -1.14
SNX6-201ENST00000362031 RBMY1DP0C7P1 496 aaKnown RBP7.95□□□□□ -1.14
SNX6-201ENST00000362031 ID1P41134 155 aa7.95□□□□□ -1.14
SNX6-201ENST00000362031 ACTL10Q5JWF8 245 aa7.95□□□□□ -1.14
SNX6-201ENST00000362031 EIF5A2Q9GZV4 153 aaKnown RBP7.95□□□□□ -1.14
SNX6-201ENST00000362031 VAX2Q9UIW0 290 aa7.95□□□□□ -1.14
SNX6-201ENST00000362031 COL7A1Q02388 2944 aa7.95□□□□□ -1.14
SNX6-201ENST00000362031 A0A0J9YX75 114 aa7.95□□□□□ -1.14
SNX6-201ENST00000362031 OR11H12B2RN74 326 aa7.95□□□□□ -1.14
SNX6-201ENST00000362031 IGKV3-20P01619 116 aa7.95□□□□□ -1.14
SNX6-201ENST00000362031 NUTF2P61970 127 aaKnown RBP7.95□□□□□ -1.14
SNX6-201ENST00000362031 KPRPQ5T749 579 aaPredicted RBP7.95□□□□□ -1.14
SNX6-201ENST00000362031 C5orf17Q8NAS9 161 aa7.95□□□□□ -1.14
SNX6-201ENST00000362031 Q8TAT8 98 aa7.95□□□□□ -1.14
SNX6-201ENST00000362031 AGPAT4-IT1Q9H0P7 198 aa7.95□□□□□ -1.14
SNX6-201ENST00000362031 ARL2-SNX15V9GYD0 113 aa7.95□□□□□ -1.14
SNX6-201ENST00000362031 PEX7O00628 323 aa7.94□□□□□ -1.14
SNX6-201ENST00000362031 KIR3DS1Q14943 382 aa7.94□□□□□ -1.14
SNX6-201ENST00000362031 OR8A1Q8NGG7 326 aa7.94□□□□□ -1.14
SNX6-201ENST00000362031 C2CD4CQ8TF44 421 aa7.94□□□□□ -1.14
SNX6-201ENST00000362031 TVP23CQ96ET8 276 aa7.94□□□□□ -1.14
SNX6-201ENST00000362031 H3BMM0 161 aa7.93□□□□□ -1.14
SNX6-201ENST00000362031 PPT1P50897 306 aa7.93□□□□□ -1.14
SNX6-201ENST00000362031 CNN1P51911 297 aaKnown RBP7.93□□□□□ -1.14
SNX6-201ENST00000362031 HIST1H1AQ02539 215 aaPredicted RBP7.93□□□□□ -1.14
SNX6-201ENST00000362031 GAGE1Q13065 139 aa7.93□□□□□ -1.14
SNX6-201ENST00000362031 SVBPQ8N300 66 aa7.93□□□□□ -1.14
SNX6-201ENST00000362031 CMTM2Q8TAZ6 248 aa7.93□□□□□ -1.14
SNX6-201ENST00000362031 MRPL53Q96EL3 112 aaKnown RBP7.93□□□□□ -1.14
SNX6-201ENST00000362031 HUWE1Q7Z6Z7 4374 aaKnown RBP7.93□□□□□ -1.14
SNX6-201ENST00000362031 IFNA1P01562 189 aa7.93□□□□□ -1.14
SNX6-201ENST00000362031 SRP19P09132 144 aaKnown RBP7.93□□□□□ -1.14
SNX6-201ENST00000362031 CT45A10P0DMU9 189 aa7.93□□□□□ -1.14
SNX6-201ENST00000362031 SAMD13Q5VXD3 122 aa7.93□□□□□ -1.14
SNX6-201ENST00000362031 UQCC3Q6UW78 93 aa7.93□□□□□ -1.14
SNX6-201ENST00000362031 Q6ZQT7 251 aa7.93□□□□□ -1.14
SNX6-201ENST00000362031 GTSCR1Q86UQ5 136 aa7.93□□□□□ -1.14
SNX6-201ENST00000362031 CYB561D1Q8N8Q1 229 aa7.93□□□□□ -1.14
SNX6-201ENST00000362031 ATG101Q9BSB4 218 aa7.93□□□□□ -1.14
SNX6-201ENST00000362031 TRBV20OR9-2A0A075B6H5 130 aa7.92□□□□□ -1.14
SNX6-201ENST00000362031 HLA-DRB4P13762 266 aa7.92□□□□□ -1.14
SNX6-201ENST00000362031 AMTNQ6UX39 209 aa7.92□□□□□ -1.14
SNX6-201ENST00000362031 FOXI2Q6ZQN5 318 aa7.92□□□□□ -1.14
SNX6-201ENST00000362031 C11orf52Q96A22 123 aa7.92□□□□□ -1.14
SNX6-201ENST00000362031 FAM110AQ9BQ89 295 aa7.92□□□□□ -1.14
SNX6-201ENST00000362031 AURKAIP1Q9NWT8 199 aaPredicted RBP7.92□□□□□ -1.14
SNX6-201ENST00000362031 HLA-DRB4X5D2U9 266 aa7.92□□□□□ -1.14
SNX6-201ENST00000362031 PGPEP1LA6NFU8 196 aa7.91□□□□□ -1.14
SNX6-201ENST00000362031 NPIPB6E9PJ23 425 aa7.91□□□□□ -1.14
SNX6-201ENST00000362031 GIG44P09565 113 aaPredicted RBP7.91□□□□□ -1.14
SNX6-201ENST00000362031 G0S2P27469 103 aa7.91□□□□□ -1.14
SNX6-201ENST00000362031 CSN1S1P47710 185 aa7.91□□□□□ -1.14
SNX6-201ENST00000362031 CEBPGP53567 150 aa7.91□□□□□ -1.14
SNX6-201ENST00000362031 FXYD7P58549 80 aa7.91□□□□□ -1.14
SNX6-201ENST00000362031 SNRPEP62304 92 aaKnown RBP7.91□□□□□ -1.14
SNX6-201ENST00000362031 OR4B1Q8NGF8 309 aa7.91□□□□□ -1.14
SNX6-201ENST00000362031 SLC35B3Q9H1N7 401 aa7.91□□□□□ -1.14
SNX6-201ENST00000362031 CLEC5AQ9NY25 188 aa7.91□□□□□ -1.14
SNX6-201ENST00000362031 FBN3Q75N90 2809 aa7.91□□□□□ -1.14
SNX6-201ENST00000362031 K7EIL1 84 aa7.91□□□□□ -1.14
SNX6-201ENST00000362031 IGHV4-30-4P0DP06 118 aa7.91□□□□□ -1.14
SNX6-201ENST00000362031 RPL35AP18077 110 aaKnown RBP7.91□□□□□ -1.14
SNX6-201ENST00000362031 PRR9Q5T870 116 aa7.91□□□□□ -1.14
SNX6-201ENST00000362031 C9orf47Q6ZRZ4 202 aa7.91□□□□□ -1.14
SNX6-201ENST00000362031 TRPT1Q86TN4 253 aaKnown RBP7.91□□□□□ -1.14
SNX6-201ENST00000362031 HIST1H2BAQ96A08 127 aa7.91□□□□□ -1.14
SNX6-201ENST00000362031 SRD5A3Q9H8P0 318 aa7.91□□□□□ -1.14
SNX6-201ENST00000362031 KLF12Q9Y4X4 402 aa7.91□□□□□ -1.14
SNX6-201ENST00000362031 M0R2Z0 102 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms