RNA–Protein interactions for RNA: ENST00000361574.9

R3HDM4-201, Transcript of R3H domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene R3HDM4, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-201ENST00000361574 IGHV1-24A0A0C4DH33 117 aa17.65■□□□□ 0.42
R3HDM4-201ENST00000361574 J3QLI3 93 aa17.65■□□□□ 0.42
R3HDM4-201ENST00000361574 RNF182Q8N6D2 247 aa17.65■□□□□ 0.42
R3HDM4-201ENST00000361574 LINC01356Q8N9X3 169 aa17.65■□□□□ 0.42
R3HDM4-201ENST00000361574 FER1L6-AS1Q8NA97 138 aa17.65■□□□□ 0.42
R3HDM4-201ENST00000361574 PRR31Q5SQ13 230 aa17.64■□□□□ 0.41
R3HDM4-201ENST00000361574 C9orf139Q6ZV77 190 aa17.64■□□□□ 0.41
R3HDM4-201ENST00000361574 AGPAT4-IT1Q9H0P7 198 aa17.64■□□□□ 0.41
R3HDM4-201ENST00000361574 ACACBO00763 2458 aa17.64■□□□□ 0.41
R3HDM4-201ENST00000361574 IGHV3-66A0A0C4DH42 116 aa17.63■□□□□ 0.41
R3HDM4-201ENST00000361574 HIST1H1AQ02539 215 aaPredicted RBP17.63■□□□□ 0.41
R3HDM4-201ENST00000361574 ERCC8Q13216 396 aa17.63■□□□□ 0.41
R3HDM4-201ENST00000361574 ZNF138P52744 262 aa17.63■□□□□ 0.41
R3HDM4-201ENST00000361574 TMEM70Q9BUB7 260 aa17.63■□□□□ 0.41
R3HDM4-201ENST00000361574 LENEPQ9Y5L5 61 aa17.63■□□□□ 0.41
R3HDM4-201ENST00000361574 C20orf202A1L168 122 aa17.62■□□□□ 0.41
R3HDM4-201ENST00000361574 TMSB15BA0A087X1C1 80 aa17.61■□□□□ 0.41
R3HDM4-201ENST00000361574 A0A0G2JLM5 398 aa17.61■□□□□ 0.41
R3HDM4-201ENST00000361574 TMEM213A2RRL7 107 aa17.61■□□□□ 0.41
R3HDM4-201ENST00000361574 M0QZ24 198 aa17.61■□□□□ 0.41
R3HDM4-201ENST00000361574 ZNF207O43670 478 aaKnown RBP17.61■□□□□ 0.41
R3HDM4-201ENST00000361574 BLCAPP62952 87 aa17.61■□□□□ 0.41
R3HDM4-201ENST00000361574 TPPP3Q9BW30 176 aa17.61■□□□□ 0.41
R3HDM4-201ENST00000361574 USP9XQ93008 2570 aaPredicted RBP17.61■□□□□ 0.41
R3HDM4-201ENST00000361574 SPTAN1Q13813 2472 aaKnown RBP17.61■□□□□ 0.41
R3HDM4-201ENST00000361574 COX6B1P14854 86 aa17.61■□□□□ 0.41
R3HDM4-201ENST00000361574 IGHV3OR16-13A0A075B7E8 117 aa17.6■□□□□ 0.41
R3HDM4-201ENST00000361574 IGHV3-74A0A0B4J1X5 117 aa17.6■□□□□ 0.41
R3HDM4-201ENST00000361574 M0R143 59 aa17.6■□□□□ 0.41
R3HDM4-201ENST00000361574 TRBV12-3P01733 135 aa17.6■□□□□ 0.41
R3HDM4-201ENST00000361574 SPATA45Q537H7 98 aa17.6■□□□□ 0.41
R3HDM4-201ENST00000361574 TMEM78Q5T7P6 136 aa17.6■□□□□ 0.41
R3HDM4-201ENST00000361574 IL17RELQ6ZVW7 336 aa17.6■□□□□ 0.41
R3HDM4-201ENST00000361574 SNHG12Q9BXW3 62 aa17.6■□□□□ 0.41
R3HDM4-201ENST00000361574 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.6■□□□□ 0.412e-6■■■□□ 19.2
R3HDM4-201ENST00000361574 LEPROTL1O95214 131 aa17.59■□□□□ 0.41
R3HDM4-201ENST00000361574 UNQ9165/PRO28630Q6UXU0 137 aa17.59■□□□□ 0.41
R3HDM4-201ENST00000361574 TMEM191AQ9H0A3 160 aa17.59■□□□□ 0.41
R3HDM4-201ENST00000361574 IGHV3-49A0A0A0MS15 119 aa17.58■□□□□ 0.41
R3HDM4-201ENST00000361574 EREGO14944 169 aa17.58■□□□□ 0.41
R3HDM4-201ENST00000361574 KLHDC1Q8N7A1 406 aa17.58■□□□□ 0.41
R3HDM4-201ENST00000361574 NRGNQ92686 78 aa17.58■□□□□ 0.41
R3HDM4-201ENST00000361574 KLK15Q9H2R5 256 aa17.58■□□□□ 0.41
R3HDM4-201ENST00000361574 AP5S1Q9NUS5 200 aa17.58■□□□□ 0.41
R3HDM4-201ENST00000361574 SOCS3O14543 225 aa17.58■□□□□ 0.4
R3HDM4-201ENST00000361574 SMAD7O15105 426 aaKnown RBP17.58■□□□□ 0.4
R3HDM4-201ENST00000361574 ORM1P02763 201 aa17.58■□□□□ 0.4
R3HDM4-201ENST00000361574 Q6ZS46 218 aa17.58■□□□□ 0.4
R3HDM4-201ENST00000361574 ORMDL3Q8N138 153 aa17.58■□□□□ 0.4
R3HDM4-201ENST00000361574 BBC3Q96PG8 261 aaPredicted RBP17.58■□□□□ 0.4
R3HDM4-201ENST00000361574 TRAV9-2A0A087WT02 112 aa17.57■□□□□ 0.4
R3HDM4-201ENST00000361574 TMEM89A2RUT3 159 aa17.57■□□□□ 0.4
R3HDM4-201ENST00000361574 IGLC3P0DOY3 106 aa17.57■□□□□ 0.4
R3HDM4-201ENST00000361574 SRSF1Q07955 248 aaKnown RBP eCLIP17.57■□□□□ 0.4
R3HDM4-201ENST00000361574 LOXL1Q08397 574 aaPredicted RBP17.57■□□□□ 0.4
R3HDM4-201ENST00000361574 MRPL51Q4U2R6 128 aaKnown RBP17.57■□□□□ 0.4
R3HDM4-201ENST00000361574 GPHB5Q86YW7 130 aa17.57■□□□□ 0.4
R3HDM4-201ENST00000361574 OR4X2Q8NGF9 303 aa17.57■□□□□ 0.4
R3HDM4-201ENST00000361574 NPFFR1Q9GZQ6 430 aa17.57■□□□□ 0.4
R3HDM4-201ENST00000361574 HSPB8Q9UJY1 196 aa17.57■□□□□ 0.4
R3HDM4-201ENST00000361574 SYS1-DBNDD2H3BUS1 97 aa17.56■□□□□ 0.4
R3HDM4-201ENST00000361574 PF4V1P10720 104 aa17.56■□□□□ 0.4
R3HDM4-201ENST00000361574 ZNF705AQ6ZN79 300 aaPredicted RBP17.56■□□□□ 0.4
R3HDM4-201ENST00000361574 AMN1Q8IY45 258 aa17.56■□□□□ 0.4
R3HDM4-201ENST00000361574 ZNF843Q8N446 348 aa17.56■□□□□ 0.4
R3HDM4-201ENST00000361574 C16orf92Q96LL3 132 aa17.56■□□□□ 0.4
R3HDM4-201ENST00000361574 UQCR10Q9UDW1 63 aa17.56■□□□□ 0.4
R3HDM4-201ENST00000361574 PET117Q6UWS5 81 aa17.56■□□□□ 0.4
R3HDM4-201ENST00000361574 PRELID3AQ96N28 172 aa17.56■□□□□ 0.4
R3HDM4-201ENST00000361574 D6R8Y8 96 aa17.55■□□□□ 0.4
R3HDM4-201ENST00000361574 PRB1P04280 392 aa17.55■□□□□ 0.4
R3HDM4-201ENST00000361574 ZMAT5Q9UDW3 170 aaKnown RBP17.55■□□□□ 0.4
R3HDM4-201ENST00000361574 IGKV3D-20A0A0C4DH25 116 aa17.54■□□□□ 0.4
R3HDM4-201ENST00000361574 K7EMT4 169 aa17.54■□□□□ 0.4
R3HDM4-201ENST00000361574 FSHBP01225 129 aa17.54■□□□□ 0.4
R3HDM4-201ENST00000361574 FA2HQ7L5A8 372 aa17.54■□□□□ 0.4
R3HDM4-201ENST00000361574 SPATA12Q7Z6I5 190 aa17.54■□□□□ 0.4
R3HDM4-201ENST00000361574 LINC00477Q96M19 166 aa17.54■□□□□ 0.4
R3HDM4-201ENST00000361574 FLNCQ14315 2725 aa17.54■□□□□ 0.4
R3HDM4-201ENST00000361574 CSMD1Q96PZ7 3565 aa17.54■□□□□ 0.4
R3HDM4-201ENST00000361574 A0A1B0GV90 55 aa17.54■□□□□ 0.4
R3HDM4-201ENST00000361574 PPBPP02775 128 aa17.54■□□□□ 0.4
R3HDM4-201ENST00000361574 TWIST1Q15672 202 aa17.54■□□□□ 0.4
R3HDM4-201ENST00000361574 C20orf173Q96LM9 149 aa17.54■□□□□ 0.4
R3HDM4-201ENST00000361574 IGHV7-4-1A0A0J9YVY3 117 aa17.53■□□□□ 0.4
R3HDM4-201ENST00000361574 OVOL1O14753 267 aa17.53■□□□□ 0.4
R3HDM4-201ENST00000361574 DEFB112Q30KQ8 113 aa17.53■□□□□ 0.4
R3HDM4-201ENST00000361574 LINC00173Q6ZV60 143 aa17.53■□□□□ 0.4
R3HDM4-201ENST00000361574 PRSS3P2Q8NHM4 247 aa17.53■□□□□ 0.4
R3HDM4-201ENST00000361574 C11orf21Q9P2W6 132 aa17.53■□□□□ 0.4
R3HDM4-201ENST00000361574 LAMTOR2Q9Y2Q5 125 aa17.53■□□□□ 0.4
R3HDM4-201ENST00000361574 PSMB8P28062 276 aa17.52■□□□□ 0.4
R3HDM4-201ENST00000361574 OR10AG1Q8NH19 301 aa17.52■□□□□ 0.4
R3HDM4-201ENST00000361574 RNF185Q96GF1 192 aa17.52■□□□□ 0.4
R3HDM4-201ENST00000361574 MAP1LC3CQ9BXW4 147 aa17.52■□□□□ 0.4
R3HDM4-201ENST00000361574 SIGLEC8Q9NYZ4 499 aa17.52■□□□□ 0.4
R3HDM4-201ENST00000361574 TRBV7-9A0A0J9YWB2 115 aa17.51■□□□□ 0.39
R3HDM4-201ENST00000361574 IGHV3-11P01762 117 aa17.51■□□□□ 0.39
R3HDM4-201ENST00000361574 CSN3P07498 182 aa17.51■□□□□ 0.39
R3HDM4-201ENST00000361574 COL12A1Q99715 3063 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms