RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 IGLV3-9A0A075B6K5 115 aa16.2■□□□□ 0.18
SMURF1-202ENST00000361368 HERVK_113P63121 156 aa16.2■□□□□ 0.18
SMURF1-202ENST00000361368 IGHV1-24A0A0C4DH33 117 aa16.2■□□□□ 0.18
SMURF1-202ENST00000361368 ANGP03950 147 aaKnown RBP16.2■□□□□ 0.18
SMURF1-202ENST00000361368 CFPP27918 469 aa16.2■□□□□ 0.18
SMURF1-202ENST00000361368 TAL2Q16559 108 aa16.2■□□□□ 0.18
SMURF1-202ENST00000361368 UBE2WQ96B02 151 aa16.2■□□□□ 0.18
SMURF1-202ENST00000361368 VPREB3Q9UKI3 123 aa16.19■□□□□ 0.18
SMURF1-202ENST00000361368 TRAV12-2A0A075B6T6 113 aa16.19■□□□□ 0.18
SMURF1-202ENST00000361368 TEX48A0A1B0GUV7 120 aa16.19■□□□□ 0.18
SMURF1-202ENST00000361368 UBL5Q9BZL1 73 aa16.19■□□□□ 0.18
SMURF1-202ENST00000361368 GREB1Q4ZG55 1949 aa16.19■□□□□ 0.18
SMURF1-202ENST00000361368 FOXI2Q6ZQN5 318 aa16.19■□□□□ 0.18
SMURF1-202ENST00000361368 CNOT1A5YKK6 2376 aaKnown RBP16.19■□□□□ 0.18
SMURF1-202ENST00000361368 SCRT2Q9NQ03 307 aa16.19■□□□□ 0.18
SMURF1-202ENST00000361368 KAAG1Q9UBP8 84 aa16.19■□□□□ 0.18
SMURF1-202ENST00000361368 SIPA1L1O43166 1804 aa16.18■□□□□ 0.18
SMURF1-202ENST00000361368 TRBV20-1A0A075B6N2 111 aa16.18■□□□□ 0.18
SMURF1-202ENST00000361368 NXPH4O95158 308 aa16.18■□□□□ 0.18
SMURF1-202ENST00000361368 TRAV25A0A0B4J276 109 aa16.17■□□□□ 0.18
SMURF1-202ENST00000361368 IGHV3-38A0A0C4DH36 116 aa16.17■□□□□ 0.18
SMURF1-202ENST00000361368 UBE2BP63146 152 aa16.16■□□□□ 0.18
SMURF1-202ENST00000361368 OR11H6Q8NGC7 330 aa16.16■□□□□ 0.18
SMURF1-202ENST00000361368 TRAV13-2A0A0B4J235 113 aa16.16■□□□□ 0.18
SMURF1-202ENST00000361368 NDUFA12Q9UI09 145 aa16.16■□□□□ 0.18
SMURF1-202ENST00000361368 DOPEY2Q9Y3R5 2298 aa16.16■□□□□ 0.18
SMURF1-202ENST00000361368 LY6G6EA0A0G2JKS1 128 aa16.16■□□□□ 0.18
SMURF1-202ENST00000361368 C9orf66Q5T8R8 295 aa16.16■□□□□ 0.18
SMURF1-202ENST00000361368 FAM231DQ6ZW35 169 aa16.16■□□□□ 0.18
SMURF1-202ENST00000361368 U3KQA8 63 aa16.16■□□□□ 0.18
SMURF1-202ENST00000361368 FREM3P0C091 2139 aa16.15■□□□□ 0.18
SMURF1-202ENST00000361368 A0A1B0GUS0 222 aa16.15■□□□□ 0.18
SMURF1-202ENST00000361368 CRLF1O75462 422 aa16.15■□□□□ 0.18
SMURF1-202ENST00000361368 STPG4Q8N801 248 aa16.15■□□□□ 0.18
SMURF1-202ENST00000361368 MRPL53Q96EL3 112 aaKnown RBP16.15■□□□□ 0.18
SMURF1-202ENST00000361368 SPANXA1Q9NS26 97 aa16.15■□□□□ 0.18
SMURF1-202ENST00000361368 MRPL51Q4U2R6 128 aaKnown RBP16.14■□□□□ 0.17
SMURF1-202ENST00000361368 DSCR8Q96T75 97 aa16.14■□□□□ 0.17
SMURF1-202ENST00000361368 SMIM2Q9BVW6 85 aa16.14■□□□□ 0.17
SMURF1-202ENST00000361368 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.14■□□□□ 0.17
SMURF1-202ENST00000361368 UTF1Q5T230 341 aa16.14■□□□□ 0.17
SMURF1-202ENST00000361368 SPANXDQ9BXN6 97 aa16.14■□□□□ 0.17
SMURF1-202ENST00000361368 FAM215AQ9Y5M1 114 aa16.14■□□□□ 0.17
SMURF1-202ENST00000361368 IGKV2D-24A0A075B6R9 120 aa16.13■□□□□ 0.17
SMURF1-202ENST00000361368 K7EM74 188 aa16.13■□□□□ 0.17
SMURF1-202ENST00000361368 IGHV2-5P01817 119 aa16.13■□□□□ 0.17
SMURF1-202ENST00000361368 C8orf31Q8N9H6 132 aa16.13■□□□□ 0.17
SMURF1-202ENST00000361368 PYGO2Q9BRQ0 406 aa16.13■□□□□ 0.17
SMURF1-202ENST00000361368 PROK2Q9HC23 129 aa16.13■□□□□ 0.17
SMURF1-202ENST00000361368 SCN5AQ14524 2016 aa16.13■□□□□ 0.17
SMURF1-202ENST00000361368 C20orf78Q9BR46 151 aa16.13■□□□□ 0.17
SMURF1-202ENST00000361368 C18orf32Q8TCD1 76 aa16.13■□□□□ 0.17
SMURF1-202ENST00000361368 CCL24O00175 119 aa16.12■□□□□ 0.17
SMURF1-202ENST00000361368 WT1-ASQ06250 92 aa16.12■□□□□ 0.17
SMURF1-202ENST00000361368 DEFB112Q30KQ8 113 aa16.12■□□□□ 0.17
SMURF1-202ENST00000361368 PIP4P1Q86T03 277 aa16.12■□□□□ 0.17
SMURF1-202ENST00000361368 ACACAQ13085 2346 aa16.12■□□□□ 0.17
SMURF1-202ENST00000361368 TCF15Q12870 199 aa16.12■□□□□ 0.17
SMURF1-202ENST00000361368 DEFB113Q30KQ7 82 aa16.12■□□□□ 0.17
SMURF1-202ENST00000361368 DUX4L9Q6RFH8 374 aaPredicted RBP16.12■□□□□ 0.17
SMURF1-202ENST00000361368 WDR86Q86TI4 376 aa16.12■□□□□ 0.17
SMURF1-202ENST00000361368 DKK4Q9UBT3 224 aa16.12■□□□□ 0.17
SMURF1-202ENST00000361368 C15orf65H3BRN8 121 aa16.11■□□□□ 0.17
SMURF1-202ENST00000361368 FAM120AOSQ5T036 256 aa16.11■□□□□ 0.17
SMURF1-202ENST00000361368 VOPP1Q96AW1 172 aa16.11■□□□□ 0.17
SMURF1-202ENST00000361368 FHL1Q13642 323 aa16.11■□□□□ 0.17
SMURF1-202ENST00000361368 MRAPQ8TCY5 172 aa16.11■□□□□ 0.17
SMURF1-202ENST00000361368 ABCA4P78363 2273 aa16.11■□□□□ 0.17
SMURF1-202ENST00000361368 IGKV1OR2-108A0A075B7D4 117 aa16.11■□□□□ 0.17
SMURF1-202ENST00000361368 IGKV1-39P01597 117 aa16.11■□□□□ 0.17
SMURF1-202ENST00000361368 IGKV1D-39P04432 117 aa16.11■□□□□ 0.17
SMURF1-202ENST00000361368 ADAMTSL5Q6ZMM2 481 aa16.11■□□□□ 0.17
SMURF1-202ENST00000361368 A0A096LPF7 62 aa16.1■□□□□ 0.17
SMURF1-202ENST00000361368 HOXB4P17483 251 aaPredicted RBP16.1■□□□□ 0.17
SMURF1-202ENST00000361368 IGLC1P0CG04 106 aa16.1■□□□□ 0.17
SMURF1-202ENST00000361368 UBE2V1Q13404 147 aa16.1■□□□□ 0.17
SMURF1-202ENST00000361368 DLEU1O43261 78 aa16.1■□□□□ 0.17
SMURF1-202ENST00000361368 PRSS57Q6UWY2 283 aa16.1■□□□□ 0.17
SMURF1-202ENST00000361368 A8MWP6 167 aa16.09■□□□□ 0.17
SMURF1-202ENST00000361368 HAMPP81172 84 aa16.09■□□□□ 0.17
SMURF1-202ENST00000361368 SPTBN1Q01082 2364 aaKnown RBP16.09■□□□□ 0.17
SMURF1-202ENST00000361368 CACNA1BQ00975 2339 aa16.09■□□□□ 0.17
SMURF1-202ENST00000361368 TRAV26-2A0A0B4J265 109 aa16.09■□□□□ 0.17
SMURF1-202ENST00000361368 SH2D6Q7Z4S9 175 aa16.09■□□□□ 0.17
SMURF1-202ENST00000361368 FOXE3Q13461 319 aa16.08■□□□□ 0.17
SMURF1-202ENST00000361368 NOP10Q9NPE3 64 aaKnown RBP16.08■□□□□ 0.17
SMURF1-202ENST00000361368 TPSG1Q9NRR2 321 aa16.08■□□□□ 0.17
SMURF1-202ENST00000361368 C1orf43Q9BWL3 253 aa16.08■□□□□ 0.16
SMURF1-202ENST00000361368 PRSS33Q8NF86 280 aa16.08■□□□□ 0.16
SMURF1-202ENST00000361368 RNF152Q8N8N0 203 aa16.07■□□□□ 0.16
SMURF1-202ENST00000361368 LRRK1Q38SD2 2015 aa16.07■□□□□ 0.16
SMURF1-202ENST00000361368 IGHV4-59P01825 116 aa16.07■□□□□ 0.16
SMURF1-202ENST00000361368 SPINK8P0C7L1 97 aa16.07■□□□□ 0.16
SMURF1-202ENST00000361368 LGALS9BQ3B8N2 356 aa16.07■□□□□ 0.16
SMURF1-202ENST00000361368 LGALS9CQ6DKI2 356 aa16.07■□□□□ 0.16
SMURF1-202ENST00000361368 LENEPQ9Y5L5 61 aa16.07■□□□□ 0.16
SMURF1-202ENST00000361368 GBF1Q92538 1859 aa16.07■□□□□ 0.16
SMURF1-202ENST00000361368 IGHV2-70P01814 119 aa16.07■□□□□ 0.16
SMURF1-202ENST00000361368 KLF2Q9Y5W3 355 aaPredicted RBP16.06■□□□□ 0.16
SMURF1-202ENST00000361368 SMIM27A0A1W2PRY6 76 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms