RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 UTF1Q5T230 341 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 SYS1-DBNDD2H3BUS1 97 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 FXYD7P58549 80 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 KIAA1671Q9BY89 1806 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 LYNX1G3V0Z9 82 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 LYNX1P0DP58 116 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 SH2D6Q7Z4S9 175 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 LINC00527Q9UJ94 153 aa7.86□□□□□ -1.15
CUX1-203ENST00000360264 ZC2HC1BQ5TFG8 222 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 CDKN1BP46527 198 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 E7EQL1 145 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 VWC2Q2TAL6 325 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 AKAP13Q12802 2813 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 A0A087WWL8 130 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 C10orf55Q5SWW7 151 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 BRD3OSQ6XYD6 125 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 MSRB2Q9Y3D2 182 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 TMEM158Q8WZ71 300 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 TANC1Q9C0D5 1861 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 ZNF329Q86UD4 541 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 GLRX5Q86SX6 157 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 ZCCHC24Q8N2G6 241 aaKnown RBP7.85□□□□□ -1.15
CUX1-203ENST00000360264 LHBP01229 141 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 HERVK_113P63121 156 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 LINC01545Q5VT33 79 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 IGKV1D-8A0A087WSZ0 117 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 RNASE2P10153 161 aaKnown RBP7.85□□□□□ -1.15
CUX1-203ENST00000360264 COX11Q9Y6N1 276 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 IGHV1OR15-1A0A075B7D0 117 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 I3L3M4 83 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 SYNJ2BPP57105 145 aa7.85□□□□□ -1.15
CUX1-203ENST00000360264 IGHV1-24A0A0C4DH33 117 aa7.84□□□□□ -1.15
CUX1-203ENST00000360264 ZNF114Q8NC26 417 aa7.84□□□□□ -1.15
CUX1-203ENST00000360264 A6NNC1 897 aa7.84□□□□□ -1.15
CUX1-203ENST00000360264 C15orf62A8K5M9 175 aa7.84□□□□□ -1.15
CUX1-203ENST00000360264 ZNF362Q5T0B9 420 aaPredicted RBP7.84□□□□□ -1.15
CUX1-203ENST00000360264 LAIR2Q6ISS4 152 aa7.84□□□□□ -1.15
CUX1-203ENST00000360264 LYPD3O95274 346 aa7.84□□□□□ -1.15
CUX1-203ENST00000360264 NPC2P61916 151 aa7.84□□□□□ -1.15
CUX1-203ENST00000360264 Q8TAT8 98 aa7.84□□□□□ -1.15
CUX1-203ENST00000360264 SCRT2Q9NQ03 307 aa7.84□□□□□ -1.15
CUX1-203ENST00000360264 PNRC2Q9NPJ4 139 aaKnown RBP7.84□□□□□ -1.15
CUX1-203ENST00000360264 MAST4O15021 2626 aa7.84□□□□□ -1.15
CUX1-203ENST00000360264 WFDC12Q8WWY7 111 aa7.84□□□□□ -1.15
CUX1-203ENST00000360264 IGHV3-53P01767 116 aa7.84□□□□□ -1.16
CUX1-203ENST00000360264 LHFPL1Q86WI0 220 aa7.83□□□□□ -1.16
CUX1-203ENST00000360264 SPXQ9BT56 116 aa7.83□□□□□ -1.16
CUX1-203ENST00000360264 PRB3Q04118 309 aaPredicted RBP7.83□□□□□ -1.16
CUX1-203ENST00000360264 FGFBP3Q8TAT2 258 aa7.83□□□□□ -1.16
CUX1-203ENST00000360264 SAA4P35542 130 aa7.83□□□□□ -1.16
CUX1-203ENST00000360264 NDPQ00604 133 aa7.83□□□□□ -1.16
CUX1-203ENST00000360264 COL4A5P29400 1685 aa7.83□□□□□ -1.16
CUX1-203ENST00000360264 A0A0A6YYD4 124 aa7.83□□□□□ -1.16
CUX1-203ENST00000360264 PRSS46E5RG02 174 aa7.83□□□□□ -1.16
CUX1-203ENST00000360264 AZU1P20160 251 aa7.83□□□□□ -1.16
CUX1-203ENST00000360264 TRAV8-3A0A0A6YYJ7 113 aa7.83□□□□□ -1.16
CUX1-203ENST00000360264 EGR2P11161 476 aaPredicted RBP7.83□□□□□ -1.16
CUX1-203ENST00000360264 RIPPLY3P57055 190 aa7.83□□□□□ -1.16
CUX1-203ENST00000360264 AMN1Q8IY45 258 aa7.83□□□□□ -1.16
CUX1-203ENST00000360264 ATP6V0E1O15342 81 aa7.83□□□□□ -1.16
CUX1-203ENST00000360264 FGF16O43320 207 aa7.83□□□□□ -1.16
CUX1-203ENST00000360264 GAGE2AQ6NT46 116 aa7.83□□□□□ -1.16
CUX1-203ENST00000360264 HIST1H2BLQ99880 126 aa7.83□□□□□ -1.16
CUX1-203ENST00000360264 GAS1P54826 345 aa7.83□□□□□ -1.16
CUX1-203ENST00000360264 C8orf86Q6ZUL3 223 aa7.83□□□□□ -1.16
CUX1-203ENST00000360264 PAQR4Q8N4S7 273 aaPredicted RBP7.83□□□□□ -1.16
CUX1-203ENST00000360264 EPG5Q9HCE0 2579 aa7.83□□□□□ -1.16
CUX1-203ENST00000360264 ELANEP08246 267 aa7.83□□□□□ -1.16
CUX1-203ENST00000360264 OCIAD2Q56VL3 154 aa7.82□□□□□ -1.16
CUX1-203ENST00000360264 Q96MF0 132 aa7.82□□□□□ -1.16
CUX1-203ENST00000360264 ZNF492Q9P255 531 aa7.82□□□□□ -1.16
CUX1-203ENST00000360264 PTPRBP23467 1997 aa7.82□□□□□ -1.16
CUX1-203ENST00000360264 ZNF625Q96I27 306 aaPredicted RBP7.82□□□□□ -1.16
CUX1-203ENST00000360264 CITED1Q99966 193 aa7.82□□□□□ -1.16
CUX1-203ENST00000360264 F8W1H4 67 aa7.82□□□□□ -1.16
CUX1-203ENST00000360264 ATP6V0BQ99437 205 aa7.82□□□□□ -1.16
CUX1-203ENST00000360264 TMEM14CQ9P0S9 112 aa7.82□□□□□ -1.16
CUX1-203ENST00000360264 SP5Q6BEB4 398 aaPredicted RBP7.82□□□□□ -1.16
CUX1-203ENST00000360264 A0A087X0K7 114 aa7.82□□□□□ -1.16
CUX1-203ENST00000360264 NCR2O95944 276 aa7.82□□□□□ -1.16
CUX1-203ENST00000360264 TBX6O95947 436 aaPredicted RBP7.82□□□□□ -1.16
CUX1-203ENST00000360264 RHOHQ15669 191 aa7.82□□□□□ -1.16
CUX1-203ENST00000360264 A0A1W2PPI3 338 aa7.82□□□□□ -1.16
CUX1-203ENST00000360264 LINC00473A8K010 186 aa7.82□□□□□ -1.16
CUX1-203ENST00000360264 GAGE12JA6NER3 117 aa7.82□□□□□ -1.16
CUX1-203ENST00000360264 GAGE1Q13065 139 aa7.82□□□□□ -1.16
CUX1-203ENST00000360264 GAGE4Q13068 117 aa7.82□□□□□ -1.16
CUX1-203ENST00000360264 GAGE5Q13069 117 aa7.82□□□□□ -1.16
CUX1-203ENST00000360264 hADV29S1A0JD25 119 aa7.81□□□□□ -1.16
CUX1-203ENST00000360264 KIR3DS1Q14943 382 aa7.81□□□□□ -1.16
CUX1-203ENST00000360264 LURAP1LQ8IV03 231 aa7.81□□□□□ -1.16
CUX1-203ENST00000360264 IGKV1D-17A0A075B6S4 117 aa7.81□□□□□ -1.16
CUX1-203ENST00000360264 hDV102S1A0JD36 115 aa7.81□□□□□ -1.16
CUX1-203ENST00000360264 A0A1B0GUS0 222 aa7.81□□□□□ -1.16
CUX1-203ENST00000360264 H0YIZ8 118 aa7.81□□□□□ -1.16
CUX1-203ENST00000360264 IGHG4P01861 327 aa7.81□□□□□ -1.16
CUX1-203ENST00000360264 IGKV1-5P01602 117 aa7.81□□□□□ -1.16
CUX1-203ENST00000360264 FAM104BQ5XKR9 115 aa7.81□□□□□ -1.16
CUX1-203ENST00000360264 Q8N8P6 123 aa7.81□□□□□ -1.16
CUX1-203ENST00000360264 TSSC4Q9Y5U2 329 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 350.9 ms