RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 PRNTQ86SH4 94 aa10.45□□□□□ -0.74
PDLIM5-203ENST00000359265 DYNLRB2Q8TF09 96 aa10.45□□□□□ -0.74
PDLIM5-203ENST00000359265 SFRP2Q96HF1 295 aa10.45□□□□□ -0.74
PDLIM5-203ENST00000359265 SGK494Q96LW2 274 aa10.45□□□□□ -0.74
PDLIM5-203ENST00000359265 CITED1Q99966 193 aa10.45□□□□□ -0.74
PDLIM5-203ENST00000359265 TMEM242Q9NWH2 141 aa10.45□□□□□ -0.74
PDLIM5-203ENST00000359265 PSG8Q9UQ74 426 aa10.45□□□□□ -0.74
PDLIM5-203ENST00000359265 TRAV8-1A0A0A6YYK1 113 aa10.44□□□□□ -0.74
PDLIM5-203ENST00000359265 OVOL1O14753 267 aa10.44□□□□□ -0.74
PDLIM5-203ENST00000359265 CSN3P07498 182 aa10.44□□□□□ -0.74
PDLIM5-203ENST00000359265 PAFAH1B2P68402 229 aa10.44□□□□□ -0.74
PDLIM5-203ENST00000359265 C15orf54Q8N8G6 183 aa10.44□□□□□ -0.74
PDLIM5-203ENST00000359265 NHLRC2Q8NBF2 726 aa10.44□□□□□ -0.74
PDLIM5-203ENST00000359265 ZNF738Q8NE65 137 aa10.44□□□□□ -0.74
PDLIM5-203ENST00000359265 OR10G8Q8NGN5 311 aa10.44□□□□□ -0.74
PDLIM5-203ENST00000359265 TUBA4BQ9H853 241 aa10.44□□□□□ -0.74
PDLIM5-203ENST00000359265 ZFP30Q9Y2G7 519 aa10.44□□□□□ -0.74
PDLIM5-203ENST00000359265 WNK1Q9H4A3 2382 aa10.44□□□□□ -0.74
PDLIM5-203ENST00000359265 CXorf65A6NEN9 183 aa10.43□□□□□ -0.74
PDLIM5-203ENST00000359265 ZNF705FA8MVS1 300 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-203ENST00000359265 ADAMTSL5Q6ZMM2 481 aa10.43□□□□□ -0.74
PDLIM5-203ENST00000359265 TMEM183AQ8IXX5 376 aa10.43□□□□□ -0.74
PDLIM5-203ENST00000359265 GBGT1Q8N5D6 347 aa10.43□□□□□ -0.74
PDLIM5-203ENST00000359265 NDFIP1Q9BT67 221 aa10.43□□□□□ -0.74
PDLIM5-203ENST00000359265 MS4A6AQ9H2W1 248 aa10.43□□□□□ -0.74
PDLIM5-203ENST00000359265 SELENOKQ9Y6D0 94 aa10.43□□□□□ -0.74
PDLIM5-203ENST00000359265 K7EQG2 157 aa10.42□□□□□ -0.74
PDLIM5-203ENST00000359265 PF4P02776 101 aa10.42□□□□□ -0.74
PDLIM5-203ENST00000359265 ERVFC1-1P60608 527 aa10.42□□□□□ -0.74
PDLIM5-203ENST00000359265 OR5I1Q13606 314 aa10.42□□□□□ -0.74
PDLIM5-203ENST00000359265 WFDC3Q8IUB2 231 aa10.42□□□□□ -0.74
PDLIM5-203ENST00000359265 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-203ENST00000359265 DCANP1Q8TF63 244 aa10.42□□□□□ -0.74
PDLIM5-203ENST00000359265 C20orf173Q96LM9 149 aa10.42□□□□□ -0.74
PDLIM5-203ENST00000359265 ZNF747Q9BV97 191 aa10.42□□□□□ -0.74
PDLIM5-203ENST00000359265 MLST8Q9BVC4 326 aa10.42□□□□□ -0.74
PDLIM5-203ENST00000359265 OSTCQ9NRP0 149 aa10.42□□□□□ -0.74
PDLIM5-203ENST00000359265 TRAV2A0A0B4J234 112 aa10.41□□□□□ -0.74
PDLIM5-203ENST00000359265 PRAC2D3DTV9 90 aa10.41□□□□□ -0.74
PDLIM5-203ENST00000359265 PRB4P10163 310 aaPredicted RBP10.41□□□□□ -0.74
PDLIM5-203ENST00000359265 TFPI2P48307 235 aa10.41□□□□□ -0.74
PDLIM5-203ENST00000359265 SNRPD3P62318 126 aaKnown RBP10.41□□□□□ -0.74
PDLIM5-203ENST00000359265 SAPCD1Q5SSQ6 148 aa10.41□□□□□ -0.74
PDLIM5-203ENST00000359265 IBA57Q5T440 356 aaKnown RBP10.41□□□□□ -0.74
PDLIM5-203ENST00000359265 RBPMS2Q6ZRY4 209 aaKnown RBP10.41□□□□□ -0.74
PDLIM5-203ENST00000359265 FAM231DQ6ZW35 169 aa10.41□□□□□ -0.74
PDLIM5-203ENST00000359265 OR10J6PQ8NGY7 276 aa10.41□□□□□ -0.74
PDLIM5-203ENST00000359265 VGLL1Q99990 258 aa10.41□□□□□ -0.74
PDLIM5-203ENST00000359265 SIGLEC8Q9NYZ4 499 aa10.41□□□□□ -0.74
PDLIM5-203ENST00000359265 ZNF492Q9P255 531 aa10.41□□□□□ -0.74
PDLIM5-203ENST00000359265 CT45A10P0DMU9 189 aa10.4□□□□□ -0.74
PDLIM5-203ENST00000359265 S100PP25815 95 aa10.4□□□□□ -0.74
PDLIM5-203ENST00000359265 TMEM78Q5T7P6 136 aa10.4□□□□□ -0.74
PDLIM5-203ENST00000359265 PRR27Q6MZM9 219 aa10.4□□□□□ -0.74
PDLIM5-203ENST00000359265 C9orf47Q6ZRZ4 202 aa10.4□□□□□ -0.74
PDLIM5-203ENST00000359265 TRAV25A0A0B4J276 109 aa10.39□□□□□ -0.75
PDLIM5-203ENST00000359265 ZNF138P52744 262 aa10.39□□□□□ -0.75
PDLIM5-203ENST00000359265 DEFB114Q30KQ6 69 aa10.39□□□□□ -0.75
PDLIM5-203ENST00000359265 KCNIP4Q6PIL6 250 aa10.39□□□□□ -0.75
PDLIM5-203ENST00000359265 SHISA2Q6UWI4 295 aa10.39□□□□□ -0.75
PDLIM5-203ENST00000359265 TMEM61Q8N0U2 210 aa10.39□□□□□ -0.75
PDLIM5-203ENST00000359265 Q8TAT8 98 aa10.39□□□□□ -0.75
PDLIM5-203ENST00000359265 PRR25Q96S07 402 aa10.39□□□□□ -0.75
PDLIM5-203ENST00000359265 RNASE7Q9H1E1 156 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-203ENST00000359265 ZNF705GA8MUZ8 300 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-203ENST00000359265 NPIPB6E9PJ23 425 aa10.38□□□□□ -0.75
PDLIM5-203ENST00000359265 GATCO43716 136 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-203ENST00000359265 ZNF688P0C7X2 276 aa10.38□□□□□ -0.75
PDLIM5-203ENST00000359265 ERCC8Q13216 396 aa10.38□□□□□ -0.75
PDLIM5-203ENST00000359265 OR8A1Q8NGG7 326 aa10.38□□□□□ -0.75
PDLIM5-203ENST00000359265 DAZAP1Q96EP5 407 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-203ENST00000359265 ZC2HC1AQ96GY0 325 aa10.38□□□□□ -0.75
PDLIM5-203ENST00000359265 IMMP2LQ96T52 175 aa10.38□□□□□ -0.75
PDLIM5-203ENST00000359265 AGPAT4-IT1Q9H0P7 198 aa10.38□□□□□ -0.75
PDLIM5-203ENST00000359265 PPP1R14DQ9NXH3 145 aa10.38□□□□□ -0.75
PDLIM5-203ENST00000359265 V9GYV3 84 aa10.38□□□□□ -0.75
PDLIM5-203ENST00000359265 OR4C46A6NHA9 309 aa10.37□□□□□ -0.75
PDLIM5-203ENST00000359265 P01737 135 aa10.37□□□□□ -0.75
PDLIM5-203ENST00000359265 HIST1H1AQ02539 215 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-203ENST00000359265 SMUG1Q53HV7 270 aa10.37□□□□□ -0.75
PDLIM5-203ENST00000359265 PSMG4Q5JS54 123 aa10.37□□□□□ -0.75
PDLIM5-203ENST00000359265 COX8CQ7Z4L0 72 aa10.37□□□□□ -0.75
PDLIM5-203ENST00000359265 FAM24BQ8N5W8 94 aa10.37□□□□□ -0.75
PDLIM5-203ENST00000359265 NUDT10Q8NFP7 164 aa10.37□□□□□ -0.75
PDLIM5-203ENST00000359265 OR4B1Q8NGF8 309 aa10.37□□□□□ -0.75
PDLIM5-203ENST00000359265 NUDT11Q96G61 164 aa10.37□□□□□ -0.75
PDLIM5-203ENST00000359265 LINC00477Q96M19 166 aa10.37□□□□□ -0.75
PDLIM5-203ENST00000359265 C8orf49Q96NF6 230 aa10.37□□□□□ -0.75
PDLIM5-203ENST00000359265 SPAG8Q99932 426 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-203ENST00000359265 IL36BQ9NZH7 164 aa10.37□□□□□ -0.75
PDLIM5-203ENST00000359265 LENEPQ9Y5L5 61 aa10.37□□□□□ -0.75
PDLIM5-203ENST00000359265 URGCP-MRPS24S4R325 110 aa10.37□□□□□ -0.75
PDLIM5-203ENST00000359265 C19orf71A6NCJ1 209 aa10.36□□□□□ -0.75
PDLIM5-203ENST00000359265 SAP30O75446 220 aa10.36□□□□□ -0.75
PDLIM5-203ENST00000359265 PFN1P07737 140 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-203ENST00000359265 ELOBQ15370 118 aa10.36□□□□□ -0.75
PDLIM5-203ENST00000359265 CD300EQ496F6 205 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-203ENST00000359265 BTF3L4Q96K17 158 aa10.36□□□□□ -0.75
PDLIM5-203ENST00000359265 YPEL4Q96NS1 127 aa10.36□□□□□ -0.75
PDLIM5-203ENST00000359265 ASCL2Q99929 193 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms