RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 IGLC7A0M8Q6 106 aa12.48□□□□□ -0.41
TRAPPC11-202ENST00000357207 K7EP34 96 aa12.48□□□□□ -0.41
TRAPPC11-202ENST00000357207 DYSFO75923 2080 aa12.47□□□□□ -0.41
TRAPPC11-202ENST00000357207 IGLV3-9A0A075B6K5 115 aa12.47□□□□□ -0.41
TRAPPC11-202ENST00000357207 DKK1O94907 266 aa12.47□□□□□ -0.41
TRAPPC11-202ENST00000357207 SRCAPQ6ZRS2 3230 aa12.47□□□□□ -0.41
TRAPPC11-202ENST00000357207 C11orf53Q8IXP5 236 aa12.47□□□□□ -0.41
TRAPPC11-202ENST00000357207 C9JAW5 83 aa12.46□□□□□ -0.41
TRAPPC11-202ENST00000357207 NPYP01303 97 aa12.46□□□□□ -0.41
TRAPPC11-202ENST00000357207 KLF5Q13887 457 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC11-202ENST00000357207 ZNF747Q9BV97 191 aa12.46□□□□□ -0.41
TRAPPC11-202ENST00000357207 TANC1Q9C0D5 1861 aa12.46□□□□□ -0.41
TRAPPC11-202ENST00000357207 NPC2P61916 151 aa12.46□□□□□ -0.41
TRAPPC11-202ENST00000357207 TNCP24821 2201 aa12.46□□□□□ -0.41
TRAPPC11-202ENST00000357207 C3orf36Q3SXR2 165 aa12.46□□□□□ -0.41
TRAPPC11-202ENST00000357207 TEX36Q5VZQ5 186 aa12.46□□□□□ -0.41
TRAPPC11-202ENST00000357207 RHPN1-AS1Q9BWJ2 59 aa12.46□□□□□ -0.41
TRAPPC11-202ENST00000357207 A0A087WWL8 130 aa12.46□□□□□ -0.42
TRAPPC11-202ENST00000357207 STHQ8IWL8 128 aa12.46□□□□□ -0.42
TRAPPC11-202ENST00000357207 TSSC4Q9Y5U2 329 aaPredicted RBP12.46□□□□□ -0.42
TRAPPC11-202ENST00000357207 A0A1W2PPM0 123 aa12.45□□□□□ -0.42
TRAPPC11-202ENST00000357207 H3BRN7 92 aa12.45□□□□□ -0.42
TRAPPC11-202ENST00000357207 H3BUX3 64 aa12.45□□□□□ -0.42
TRAPPC11-202ENST00000357207 K7EM74 188 aa12.45□□□□□ -0.42
TRAPPC11-202ENST00000357207 MRPL35Q9NZE8 188 aaKnown RBP12.45□□□□□ -0.42
TRAPPC11-202ENST00000357207 FRMPD3Q5JV73 1810 aa12.45□□□□□ -0.42
TRAPPC11-202ENST00000357207 DIAPH2-AS1Q14236 149 aa12.45□□□□□ -0.42
TRAPPC11-202ENST00000357207 USMG5Q96IX5 58 aa12.45□□□□□ -0.42
TRAPPC11-202ENST00000357207 COL4A3Q01955 1670 aa12.44□□□□□ -0.42
TRAPPC11-202ENST00000357207 SLC25A16P16260 332 aa12.44□□□□□ -0.42
TRAPPC11-202ENST00000357207 SSBP2P81877 361 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC11-202ENST00000357207 IGHV3-73A0A0B4J1V6 119 aa12.44□□□□□ -0.42
TRAPPC11-202ENST00000357207 LTAP01374 205 aa12.44□□□□□ -0.42
TRAPPC11-202ENST00000357207 BRD3OSQ6XYD6 125 aa12.44□□□□□ -0.42
TRAPPC11-202ENST00000357207 DEFB125Q8N687 156 aa12.44□□□□□ -0.42
TRAPPC11-202ENST00000357207 KRTAP27-1Q3LI81 207 aa12.44□□□□□ -0.42
TRAPPC11-202ENST00000357207 F8W1H4 67 aa12.44□□□□□ -0.42
TRAPPC11-202ENST00000357207 CFAP161Q6P656 301 aa12.44□□□□□ -0.42
TRAPPC11-202ENST00000357207 IL17RELQ6ZVW7 336 aa12.44□□□□□ -0.42
TRAPPC11-202ENST00000357207 CCL25O15444 150 aa12.43□□□□□ -0.42
TRAPPC11-202ENST00000357207 SAA4P35542 130 aa12.43□□□□□ -0.42
TRAPPC11-202ENST00000357207 SPXQ9BT56 116 aa12.43□□□□□ -0.42
TRAPPC11-202ENST00000357207 TRBV20-1A0A075B6N2 111 aa12.43□□□□□ -0.42
TRAPPC11-202ENST00000357207 ADARB2-AS1A8MUL3 147 aa12.43□□□□□ -0.42
TRAPPC11-202ENST00000357207 FAM110DQ8TAY7 271 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC11-202ENST00000357207 SIVA1O15304 175 aa12.42□□□□□ -0.42
TRAPPC11-202ENST00000357207 LY6G5BQ8NDX9 201 aa12.42□□□□□ -0.42
TRAPPC11-202ENST00000357207 TIMM21Q9BVV7 248 aa12.42□□□□□ -0.42
TRAPPC11-202ENST00000357207 TP53TG1Q9Y2A0 90 aa12.42□□□□□ -0.42
TRAPPC11-202ENST00000357207 FAM208BQ5VWN6 2430 aa12.42□□□□□ -0.42
TRAPPC11-202ENST00000357207 FAM223BA6NKX1 122 aa12.42□□□□□ -0.42
TRAPPC11-202ENST00000357207 NDUFS7O75251 213 aa12.42□□□□□ -0.42
TRAPPC11-202ENST00000357207 FAM223AQ8IWN6 122 aa12.42□□□□□ -0.42
TRAPPC11-202ENST00000357207 PF4P02776 101 aa12.42□□□□□ -0.42
TRAPPC11-202ENST00000357207 F8VRH5 84 aa12.42□□□□□ -0.42
TRAPPC11-202ENST00000357207 LINC00158P58513 81 aa12.42□□□□□ -0.42
TRAPPC11-202ENST00000357207 FAM120AOSQ5T036 256 aa12.42□□□□□ -0.42
TRAPPC11-202ENST00000357207 ZNF491Q8N8L2 437 aa12.42□□□□□ -0.42
TRAPPC11-202ENST00000357207 DKK2Q9UBU2 259 aa12.42□□□□□ -0.42
TRAPPC11-202ENST00000357207 TRGV4A0A0C4DH28 118 aa12.41□□□□□ -0.42
TRAPPC11-202ENST00000357207 ATP6V0E1O15342 81 aa12.41□□□□□ -0.42
TRAPPC11-202ENST00000357207 DTX2Q86UW9 622 aa12.41□□□□□ -0.42
TRAPPC11-202ENST00000357207 C11orf1Q9H5F2 150 aa12.41□□□□□ -0.42
TRAPPC11-202ENST00000357207 ACACBO00763 2458 aa12.41□□□□□ -0.42
TRAPPC11-202ENST00000357207 KIAA1671Q9BY89 1806 aa12.41□□□□□ -0.42
TRAPPC11-202ENST00000357207 IGHV2-70DA0A0C4DH43 119 aa12.41□□□□□ -0.42
TRAPPC11-202ENST00000357207 OVOL3O00110 214 aa12.41□□□□□ -0.42
TRAPPC11-202ENST00000357207 MYMXA0A1B0GTQ4 84 aa12.41□□□□□ -0.42
TRAPPC11-202ENST00000357207 CHCHD5Q9BSY4 110 aa12.41□□□□□ -0.42
TRAPPC11-202ENST00000357207 ANKHD1Q8IWZ3 2542 aaKnown RBP12.41□□□□□ -0.42
TRAPPC11-202ENST00000357207 TMEM86BQ8N661 226 aa12.4□□□□□ -0.42
TRAPPC11-202ENST00000357207 PRADC1Q9BSG0 188 aa12.4□□□□□ -0.42
TRAPPC11-202ENST00000357207 DAZ1Q9NQZ3 744 aaKnown RBP12.4□□□□□ -0.42
TRAPPC11-202ENST00000357207 PRR14LQ5THK1 2151 aa12.4□□□□□ -0.42
TRAPPC11-202ENST00000357207 ZFHX2Q9C0A1 2572 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC11-202ENST00000357207 A0A1W2PRX2 142 aa12.4□□□□□ -0.42
TRAPPC11-202ENST00000357207 CEACAM8P31997 349 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC11-202ENST00000357207 CDKN1BP46527 198 aa12.4□□□□□ -0.42
TRAPPC11-202ENST00000357207 RPL36AP83881 106 aaKnown RBP12.4□□□□□ -0.42
TRAPPC11-202ENST00000357207 RPL36ALQ969Q0 106 aaKnown RBP12.4□□□□□ -0.42
TRAPPC11-202ENST00000357207 SMIM2Q9BVW6 85 aa12.4□□□□□ -0.42
TRAPPC11-202ENST00000357207 C1orf122Q6ZSJ8 110 aa12.4□□□□□ -0.42
TRAPPC11-202ENST00000357207 RASL10AQ92737 203 aa12.4□□□□□ -0.42
TRAPPC11-202ENST00000357207 VGLL1Q99990 258 aa12.4□□□□□ -0.42
TRAPPC11-202ENST00000357207 PMVKQ15126 192 aa12.4□□□□□ -0.43
TRAPPC11-202ENST00000357207 DTX1Q86Y01 620 aa12.4□□□□□ -0.43
TRAPPC11-202ENST00000357207 PPDPFLQ8WWR9 84 aa12.4□□□□□ -0.43
TRAPPC11-202ENST00000357207 TRAV8-3A0A0A6YYJ7 113 aa12.39□□□□□ -0.43
TRAPPC11-202ENST00000357207 H3BMG7 143 aa12.39□□□□□ -0.43
TRAPPC11-202ENST00000357207 TAL2Q16559 108 aa12.39□□□□□ -0.43
TRAPPC11-202ENST00000357207 C17orf77Q96MU5 243 aa12.39□□□□□ -0.43
TRAPPC11-202ENST00000357207 ALPK3Q96L96 1907 aa12.39□□□□□ -0.43
TRAPPC11-202ENST00000357207 ZNF415Q09FC8 603 aa12.39□□□□□ -0.43
TRAPPC11-202ENST00000357207 WNK1Q9H4A3 2382 aa12.39□□□□□ -0.43
TRAPPC11-202ENST00000357207 TRAV26-2A0A0B4J265 109 aa12.39□□□□□ -0.43
TRAPPC11-202ENST00000357207 G3V318 75 aa12.39□□□□□ -0.43
TRAPPC11-202ENST00000357207 PLXNB1O43157 2135 aa12.39□□□□□ -0.43
TRAPPC11-202ENST00000357207 DENND4AQ7Z401 1863 aa12.39□□□□□ -0.43
TRAPPC11-202ENST00000357207 C8orf86Q6ZUL3 223 aa12.38□□□□□ -0.43
TRAPPC11-202ENST00000357207 C1orf159Q96HA4 380 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms