RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 RPH3ALQ9UNE2 315 aa11.38□□□□□ -0.59
TRIM13-201ENST00000356017 TP53TG1Q9Y2A0 90 aa11.38□□□□□ -0.59
TRIM13-201ENST00000356017 F6UZH7 168 aa11.38□□□□□ -0.59
TRIM13-201ENST00000356017 IFNA1P01562 189 aa11.38□□□□□ -0.59
TRIM13-201ENST00000356017 TCRAP04437 139 aa11.38□□□□□ -0.59
TRIM13-201ENST00000356017 CCL20P78556 96 aa11.38□□□□□ -0.59
TRIM13-201ENST00000356017 ATG101Q9BSB4 218 aa11.38□□□□□ -0.59
TRIM13-201ENST00000356017 AGPAT4-IT1Q9H0P7 198 aa11.38□□□□□ -0.59
TRIM13-201ENST00000356017 GNG13Q9P2W3 67 aa11.38□□□□□ -0.59
TRIM13-201ENST00000356017 GIG44P09565 113 aaPredicted RBP11.37□□□□□ -0.59
TRIM13-201ENST00000356017 TAGLN2P37802 199 aaKnown RBP11.37□□□□□ -0.59
TRIM13-201ENST00000356017 CDKN1BP46527 198 aa11.37□□□□□ -0.59
TRIM13-201ENST00000356017 ERCC8Q13216 396 aa11.37□□□□□ -0.59
TRIM13-201ENST00000356017 GOLT1AQ6ZVE7 132 aa11.37□□□□□ -0.59
TRIM13-201ENST00000356017 LYPD6BQ8NI32 183 aa11.37□□□□□ -0.59
TRIM13-201ENST00000356017 HIST1H2BAQ96A08 127 aa11.37□□□□□ -0.59
TRIM13-201ENST00000356017 RCHY1Q96PM5 261 aa11.37□□□□□ -0.59
TRIM13-201ENST00000356017 VGLL1Q99990 258 aa11.37□□□□□ -0.59
TRIM13-201ENST00000356017 TXNDC17Q9BRA2 123 aa11.37□□□□□ -0.59
TRIM13-201ENST00000356017 XCL2Q9UBD3 114 aa11.37□□□□□ -0.59
TRIM13-201ENST00000356017 TRBV7-9A0A0J9YWB2 115 aa11.36□□□□□ -0.59
TRIM13-201ENST00000356017 FBLL1A6NHQ2 334 aaKnown RBP11.36□□□□□ -0.59
TRIM13-201ENST00000356017 CT45A10P0DMU9 189 aa11.36□□□□□ -0.59
TRIM13-201ENST00000356017 LEPP41159 167 aa11.36□□□□□ -0.59
TRIM13-201ENST00000356017 ZNF138P52744 262 aa11.36□□□□□ -0.59
TRIM13-201ENST00000356017 GNG5P63218 68 aa11.36□□□□□ -0.59
TRIM13-201ENST00000356017 SPINK13Q1W4C9 94 aa11.36□□□□□ -0.59
TRIM13-201ENST00000356017 DEFB135Q30KP9 77 aa11.36□□□□□ -0.59
TRIM13-201ENST00000356017 CCDC28AQ8IWP9 274 aa11.36□□□□□ -0.59
TRIM13-201ENST00000356017 CYB561D1Q8N8Q1 229 aa11.36□□□□□ -0.59
TRIM13-201ENST00000356017 RNF183Q96D59 192 aa11.36□□□□□ -0.59
TRIM13-201ENST00000356017 LENEPQ9Y5L5 61 aa11.36□□□□□ -0.59
TRIM13-201ENST00000356017 AGRNO00468 2067 aa11.36□□□□□ -0.59
TRIM13-201ENST00000356017 M0R2Z0 102 aa11.35□□□□□ -0.59
TRIM13-201ENST00000356017 SPRY2O43597 315 aa11.35□□□□□ -0.59
TRIM13-201ENST00000356017 NMBP08949 121 aa11.35□□□□□ -0.59
TRIM13-201ENST00000356017 FXYD7P58549 80 aa11.35□□□□□ -0.59
TRIM13-201ENST00000356017 ZNF492Q9P255 531 aa11.35□□□□□ -0.59
TRIM13-201ENST00000356017 C11orf94C9JXX5 98 aa11.35□□□□□ -0.59
TRIM13-201ENST00000356017 CLLU1Q5K131 121 aa11.35□□□□□ -0.59
TRIM13-201ENST00000356017 CSNK1G2-AS1Q8NCQ2 148 aa11.35□□□□□ -0.59
TRIM13-201ENST00000356017 IGF2BP2-AS1Q96M15 143 aa11.35□□□□□ -0.59
TRIM13-201ENST00000356017 LINC00862A6NCI5 91 aa11.34□□□□□ -0.59
TRIM13-201ENST00000356017 PEX7O00628 323 aa11.34□□□□□ -0.59
TRIM13-201ENST00000356017 INSP01308 110 aa11.34□□□□□ -0.59
TRIM13-201ENST00000356017 ATP5G3P48201 142 aa11.34□□□□□ -0.59
TRIM13-201ENST00000356017 TMEM75Q8N9X5 138 aa11.34□□□□□ -0.59
TRIM13-201ENST00000356017 FAM19A4Q96LR4 140 aa11.34□□□□□ -0.59
TRIM13-201ENST00000356017 OVOL2Q9BRP0 275 aa11.34□□□□□ -0.59
TRIM13-201ENST00000356017 BCL2P10415 239 aa11.33□□□□□ -0.6
TRIM13-201ENST00000356017 CRISP2P16562 243 aa11.33□□□□□ -0.6
TRIM13-201ENST00000356017 VAX2Q9UIW0 290 aa11.33□□□□□ -0.6
TRIM13-201ENST00000356017 GOLT1BQ9Y3E0 138 aa11.33□□□□□ -0.6
TRIM13-201ENST00000356017 PRKDCP78527 4128 aaKnown RBP11.33□□□□□ -0.6
TRIM13-201ENST00000356017 CRXO43186 299 aaPredicted RBP11.32□□□□□ -0.6
TRIM13-201ENST00000356017 MEF2BQ02080 365 aaPredicted RBP11.32□□□□□ -0.6
TRIM13-201ENST00000356017 RARRES2Q99969 163 aa11.32□□□□□ -0.6
TRIM13-201ENST00000356017 C20orf144Q9BQM9 153 aa11.32□□□□□ -0.6
TRIM13-201ENST00000356017 NDFIP1Q9BT67 221 aa11.32□□□□□ -0.6
TRIM13-201ENST00000356017 TRAV12-2A0A075B6T6 113 aa11.31□□□□□ -0.6
TRIM13-201ENST00000356017 TRAV8-1A0A0A6YYK1 113 aa11.31□□□□□ -0.6
TRIM13-201ENST00000356017 KLLNB2CW77 178 aa11.31□□□□□ -0.6
TRIM13-201ENST00000356017 PDE6DO43924 150 aa11.31□□□□□ -0.6
TRIM13-201ENST00000356017 GPX1P07203 203 aa11.31□□□□□ -0.6
TRIM13-201ENST00000356017 S100A1P23297 94 aa11.31□□□□□ -0.6
TRIM13-201ENST00000356017 RAB14P61106 215 aa11.31□□□□□ -0.6
TRIM13-201ENST00000356017 FLI1Q01543 452 aaPredicted RBP11.31□□□□□ -0.6
TRIM13-201ENST00000356017 Q8TAT8 98 aa11.31□□□□□ -0.6
TRIM13-201ENST00000356017 RETNQ9HD89 108 aa11.31□□□□□ -0.6
TRIM13-201ENST00000356017 S100A9P06702 114 aaKnown RBP11.31□□□□□ -0.6
TRIM13-201ENST00000356017 SAPCD1Q5SSQ6 148 aa11.31□□□□□ -0.6
TRIM13-201ENST00000356017 ZNF705AQ6ZN79 300 aaPredicted RBP11.31□□□□□ -0.6
TRIM13-201ENST00000356017 TMEM256Q8N2U0 113 aa11.31□□□□□ -0.6
TRIM13-201ENST00000356017 OR11H2Q8NH07 326 aa11.31□□□□□ -0.6
TRIM13-201ENST00000356017 FMC1Q96HJ9 113 aa11.31□□□□□ -0.6
TRIM13-201ENST00000356017 TMEM208Q9BTX3 173 aa11.31□□□□□ -0.6
TRIM13-201ENST00000356017 PSG8Q9UQ74 426 aa11.31□□□□□ -0.6
TRIM13-201ENST00000356017 IGLV2-11P01706 119 aa11.3□□□□□ -0.6
TRIM13-201ENST00000356017 UBE2G1P62253 170 aa11.3□□□□□ -0.6
TRIM13-201ENST00000356017 GFI1BQ5VTD9 330 aa11.3□□□□□ -0.6
TRIM13-201ENST00000356017 ZFAND2AQ8N6M9 145 aa11.3□□□□□ -0.6
TRIM13-201ENST00000356017 SGK494Q96LW2 274 aa11.3□□□□□ -0.6
TRIM13-201ENST00000356017 FAM210AQ96ND0 272 aa11.3□□□□□ -0.6
TRIM13-201ENST00000356017 TREM1Q9NP99 234 aa11.3□□□□□ -0.6
TRIM13-201ENST00000356017 KLF12Q9Y4X4 402 aa11.3□□□□□ -0.6
TRIM13-201ENST00000356017 U3KQK5 164 aa11.3□□□□□ -0.6
TRIM13-201ENST00000356017 RBFOX3A6NFN3 312 aa11.29□□□□□ -0.6
TRIM13-201ENST00000356017 SMIM9A6NGZ8 99 aa11.29□□□□□ -0.6
TRIM13-201ENST00000356017 J3KRW8 73 aa11.29□□□□□ -0.6
TRIM13-201ENST00000356017 AKR1C3P42330 323 aa11.29□□□□□ -0.6
TRIM13-201ENST00000356017 PRNTQ86SH4 94 aa11.29□□□□□ -0.6
TRIM13-201ENST00000356017 C1orf158Q8N1D5 194 aa11.29□□□□□ -0.6
TRIM13-201ENST00000356017 LINC00479Q96M42 142 aa11.29□□□□□ -0.6
TRIM13-201ENST00000356017 NEU1Q99519 415 aa11.29□□□□□ -0.6
TRIM13-201ENST00000356017 NIPSNAP3BQ9BS92 247 aa11.29□□□□□ -0.6
TRIM13-201ENST00000356017 IGHV3OR16-12A0A075B7B8 117 aa11.28□□□□□ -0.6
TRIM13-201ENST00000356017 LOC102723971A0A1B0GUV8 181 aa11.28□□□□□ -0.6
TRIM13-201ENST00000356017 SCO2A0A1W2PP80 73 aa11.28□□□□□ -0.6
TRIM13-201ENST00000356017 C7orf71A4D174 169 aa11.28□□□□□ -0.6
TRIM13-201ENST00000356017 RNASE4P34096 147 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms