RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 SORL1Q92673 2214 aa11.69□□□□□ -0.54
CTSA-202ENST00000354880 ERCC8Q13216 396 aa11.69□□□□□ -0.54
CTSA-202ENST00000354880 TMEM183AQ8IXX5 376 aa11.69□□□□□ -0.54
CTSA-202ENST00000354880 SPAG8Q99932 426 aaPredicted RBP11.69□□□□□ -0.54
CTSA-202ENST00000354880 BTN1A1Q13410 526 aa11.68□□□□□ -0.54
CTSA-202ENST00000354880 PSMG4Q5JS54 123 aa11.68□□□□□ -0.54
CTSA-202ENST00000354880 TMEM78Q5T7P6 136 aa11.68□□□□□ -0.54
CTSA-202ENST00000354880 TMEM88Q6PEY1 159 aa11.68□□□□□ -0.54
CTSA-202ENST00000354880 C9orf47Q6ZRZ4 202 aa11.68□□□□□ -0.54
CTSA-202ENST00000354880 ANAPC16Q96DE5 110 aa11.68□□□□□ -0.54
CTSA-202ENST00000354880 ASCL2Q99929 193 aa11.68□□□□□ -0.54
CTSA-202ENST00000354880 ZNF747Q9BV97 191 aa11.68□□□□□ -0.54
CTSA-202ENST00000354880 DEFB1P60022 68 aa11.67□□□□□ -0.54
CTSA-202ENST00000354880 SAPCD1Q5SSQ6 148 aa11.67□□□□□ -0.54
CTSA-202ENST00000354880 CBLN2Q8IUK8 224 aa11.67□□□□□ -0.54
CTSA-202ENST00000354880 OR10J6PQ8NGY7 276 aa11.67□□□□□ -0.54
CTSA-202ENST00000354880 Q8TAT8 98 aa11.67□□□□□ -0.54
CTSA-202ENST00000354880 TMEM158Q8WZ71 300 aa11.67□□□□□ -0.54
CTSA-202ENST00000354880 PRR25Q96S07 402 aa11.67□□□□□ -0.54
CTSA-202ENST00000354880 CTDSP1Q9GZU7 261 aa11.67□□□□□ -0.54
CTSA-202ENST00000354880 AGPAT4-IT1Q9H0P7 198 aa11.67□□□□□ -0.54
CTSA-202ENST00000354880 TMEM242Q9NWH2 141 aa11.67□□□□□ -0.54
CTSA-202ENST00000354880 IZUMO1RA6ND01 250 aa11.67□□□□□ -0.54
CTSA-202ENST00000354880 F6UB75 175 aa11.67□□□□□ -0.54
CTSA-202ENST00000354880 IGLV1-51P01701 117 aa11.67□□□□□ -0.54
CTSA-202ENST00000354880 ZNF705DP0CH99 300 aaPredicted RBP11.67□□□□□ -0.54
CTSA-202ENST00000354880 ZNF705BP0CI00 300 aaPredicted RBP11.67□□□□□ -0.54
CTSA-202ENST00000354880 ERVFC1-1P60608 527 aa11.67□□□□□ -0.54
CTSA-202ENST00000354880 PRR27Q6MZM9 219 aa11.67□□□□□ -0.54
CTSA-202ENST00000354880 C3orf56Q8N813 242 aa11.67□□□□□ -0.54
CTSA-202ENST00000354880 OR8A1Q8NGG7 326 aa11.67□□□□□ -0.54
CTSA-202ENST00000354880 BIN3Q9NQY0 253 aa11.67□□□□□ -0.54
CTSA-202ENST00000354880 OR4C46A6NHA9 309 aa11.66□□□□□ -0.54
CTSA-202ENST00000354880 PPP1R2P9O14990 202 aa11.66□□□□□ -0.54
CTSA-202ENST00000354880 ZNF138P52744 262 aa11.66□□□□□ -0.54
CTSA-202ENST00000354880 IBA57Q5T440 356 aaKnown RBP11.66□□□□□ -0.54
CTSA-202ENST00000354880 NDFIP1Q9BT67 221 aa11.66□□□□□ -0.54
CTSA-202ENST00000354880 GPR61Q9BZJ8 451 aa11.66□□□□□ -0.54
CTSA-202ENST00000354880 RNASE7Q9H1E1 156 aaKnown RBP11.66□□□□□ -0.54
CTSA-202ENST00000354880 SMCO4Q9NRQ5 59 aa11.66□□□□□ -0.54
CTSA-202ENST00000354880 STAB1Q9NY15 2570 aa11.66□□□□□ -0.54
CTSA-202ENST00000354880 NPIPB6E9PJ23 425 aa11.65□□□□□ -0.54
CTSA-202ENST00000354880 H7BYZ3 331 aa11.65□□□□□ -0.54
CTSA-202ENST00000354880 HIST1H1AQ02539 215 aaPredicted RBP11.65□□□□□ -0.54
CTSA-202ENST00000354880 C12orf54Q6X4T0 127 aa11.65□□□□□ -0.54
CTSA-202ENST00000354880 C15orf54Q8N8G6 183 aa11.65□□□□□ -0.54
CTSA-202ENST00000354880 OR10G8Q8NGN5 311 aa11.65□□□□□ -0.54
CTSA-202ENST00000354880 ZC2HC1AQ96GY0 325 aa11.65□□□□□ -0.54
CTSA-202ENST00000354880 LINC00477Q96M19 166 aa11.65□□□□□ -0.54
CTSA-202ENST00000354880 C8orf49Q96NF6 230 aa11.65□□□□□ -0.54
CTSA-202ENST00000354880 OSTCQ9NRP0 149 aa11.65□□□□□ -0.54
CTSA-202ENST00000354880 PPP1R14DQ9NXH3 145 aa11.65□□□□□ -0.54
CTSA-202ENST00000354880 ZNF492Q9P255 531 aa11.65□□□□□ -0.54
CTSA-202ENST00000354880 ZNF256Q9Y2P7 627 aaPredicted RBP11.65□□□□□ -0.54
CTSA-202ENST00000354880 COL6A5A8TX70 2615 aa11.65□□□□□ -0.54
CTSA-202ENST00000354880 COX8CQ7Z4L0 72 aa11.65□□□□□ -0.55
CTSA-202ENST00000354880 OR2K2Q8NGT1 345 aa11.65□□□□□ -0.55
CTSA-202ENST00000354880 CT45A10P0DMU9 189 aa11.64□□□□□ -0.55
CTSA-202ENST00000354880 FAM231DQ6ZW35 169 aa11.64□□□□□ -0.55
CTSA-202ENST00000354880 TUBA4BQ9H853 241 aa11.64□□□□□ -0.55
CTSA-202ENST00000354880 CXorf65A6NEN9 183 aa11.63□□□□□ -0.55
CTSA-202ENST00000354880 GDF5OSQ5U4N7 250 aa11.63□□□□□ -0.55
CTSA-202ENST00000354880 SHISA2Q6UWI4 295 aa11.63□□□□□ -0.55
CTSA-202ENST00000354880 LINC00322Q6ZN03 302 aaPredicted RBP11.63□□□□□ -0.55
CTSA-202ENST00000354880 LENEPQ9Y5L5 61 aa11.63□□□□□ -0.55
CTSA-202ENST00000354880 A0A0J9YX75 114 aa11.63□□□□□ -0.55
CTSA-202ENST00000354880 CD33P20138 364 aa11.63□□□□□ -0.55
CTSA-202ENST00000354880 DEFB131AP59861 70 aa11.63□□□□□ -0.55
CTSA-202ENST00000354880 SMUG1Q53HV7 270 aa11.63□□□□□ -0.55
CTSA-202ENST00000354880 EBLN2Q6P2I7 272 aa11.63□□□□□ -0.55
CTSA-202ENST00000354880 FOXI2Q6ZQN5 318 aa11.63□□□□□ -0.55
CTSA-202ENST00000354880 NUDT10Q8NFP7 164 aa11.63□□□□□ -0.55
CTSA-202ENST00000354880 DAZAP1Q96EP5 407 aaKnown RBP11.63□□□□□ -0.55
CTSA-202ENST00000354880 NUDT11Q96G61 164 aa11.63□□□□□ -0.55
CTSA-202ENST00000354880 NOTCH3Q9UM47 2321 aa11.62□□□□□ -0.55
CTSA-202ENST00000354880 C19orf71A6NCJ1 209 aa11.62□□□□□ -0.55
CTSA-202ENST00000354880 INSL3P51460 131 aa11.62□□□□□ -0.55
CTSA-202ENST00000354880 SPATA3Q8NHX4 192 aa11.62□□□□□ -0.55
CTSA-202ENST00000354880 SAV1Q9H4B6 383 aaPredicted RBP11.62□□□□□ -0.55
CTSA-202ENST00000354880 MAP6D1Q9H9H5 199 aa11.62□□□□□ -0.55
CTSA-202ENST00000354880 V9GYV3 84 aa11.62□□□□□ -0.55
CTSA-202ENST00000354880 ZNF705GA8MUZ8 300 aaPredicted RBP11.61□□□□□ -0.55
CTSA-202ENST00000354880 P01737 135 aa11.61□□□□□ -0.55
CTSA-202ENST00000354880 CRIP1P50238 77 aa11.61□□□□□ -0.55
CTSA-202ENST00000354880 URGCP-MRPS24S4R325 110 aa11.61□□□□□ -0.55
CTSA-202ENST00000354880 GATCO43716 136 aaKnown RBP11.6□□□□□ -0.55
CTSA-202ENST00000354880 FAM162BQ5T6X4 162 aa11.6□□□□□ -0.55
CTSA-202ENST00000354880 C9orf66Q5T8R8 295 aa11.6□□□□□ -0.55
CTSA-202ENST00000354880 AGRNO00468 2067 aa11.6□□□□□ -0.55
CTSA-202ENST00000354880 TRBV7-9A0A0J9YWB2 115 aa11.6□□□□□ -0.55
CTSA-202ENST00000354880 DUSP14O95147 198 aaKnown RBP11.6□□□□□ -0.55
CTSA-202ENST00000354880 ODF3L2Q3SX64 289 aa11.6□□□□□ -0.55
CTSA-202ENST00000354880 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.6□□□□□ -0.55
CTSA-202ENST00000354880 WFDC9Q8NEX5 89 aa11.6□□□□□ -0.55
CTSA-202ENST00000354880 FAM19A4Q96LR4 140 aa11.6□□□□□ -0.55
CTSA-202ENST00000354880 S100PP25815 95 aa11.59□□□□□ -0.55
CTSA-202ENST00000354880 ZNF80P51504 273 aaPredicted RBP11.59□□□□□ -0.55
CTSA-202ENST00000354880 IMMP2LQ96T52 175 aa11.59□□□□□ -0.55
CTSA-202ENST00000354880 MCRIP2Q9BUT9 160 aaKnown RBP11.59□□□□□ -0.55
CTSA-202ENST00000354880 ANK2Q01484 3957 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms