RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 TMEM97Q5BJF2 176 aa9.41□□□□□ -0.9
DDX4-201ENST00000353507 FAM110DQ8TAY7 271 aaPredicted RBP9.41□□□□□ -0.9
DDX4-201ENST00000353507 COL25A1Q9BXS0 654 aaPredicted RBP9.41□□□□□ -0.9
DDX4-201ENST00000353507 GOSR1O95249 250 aa9.41□□□□□ -0.9
DDX4-201ENST00000353507 ZFP36P26651 326 aaKnown RBP9.41□□□□□ -0.9
DDX4-201ENST00000353507 SEC11AP67812 179 aa9.41□□□□□ -0.9
DDX4-201ENST00000353507 SRSF2Q01130 221 aaKnown RBP9.41□□□□□ -0.9
DDX4-201ENST00000353507 ERCC8Q13216 396 aa9.41□□□□□ -0.9
DDX4-201ENST00000353507 C21orf62-AS1Q17RA5 79 aa9.41□□□□□ -0.9
DDX4-201ENST00000353507 AMMECR1LQ6DCA0 310 aa9.41□□□□□ -0.9
DDX4-201ENST00000353507 PEF1Q9UBV8 284 aaKnown RBP9.41□□□□□ -0.9
DDX4-201ENST00000353507 MSRB2Q9Y3D2 182 aa9.41□□□□□ -0.9
DDX4-201ENST00000353507 PPBPP02775 128 aa9.4□□□□□ -0.9
DDX4-201ENST00000353507 PIP4P2Q8N4L2 257 aa9.4□□□□□ -0.9
DDX4-201ENST00000353507 ZNF502Q8TBZ5 544 aa9.4□□□□□ -0.9
DDX4-201ENST00000353507 CACNA1BQ00975 2339 aa9.4□□□□□ -0.9
DDX4-201ENST00000353507 HRNRQ86YZ3 2850 aaPredicted RBP9.4□□□□□ -0.91
DDX4-201ENST00000353507 C7orf71A4D174 169 aa9.4□□□□□ -0.91
DDX4-201ENST00000353507 PCP4P48539 62 aa9.4□□□□□ -0.91
DDX4-201ENST00000353507 PRSS57Q6UWY2 283 aa9.4□□□□□ -0.91
DDX4-201ENST00000353507 WFDC3Q8IUB2 231 aa9.4□□□□□ -0.91
DDX4-201ENST00000353507 RNF182Q8N6D2 247 aa9.4□□□□□ -0.91
DDX4-201ENST00000353507 MSRB1Q9NZV6 116 aa9.4□□□□□ -0.91
DDX4-201ENST00000353507 SPTBN1Q01082 2364 aaKnown RBP9.39□□□□□ -0.91
DDX4-201ENST00000353507 IGHV3-66A0A0C4DH42 116 aa9.39□□□□□ -0.91
DDX4-201ENST00000353507 PRAC2D3DTV9 90 aa9.39□□□□□ -0.91
DDX4-201ENST00000353507 ATP6V0E1O15342 81 aa9.39□□□□□ -0.91
DDX4-201ENST00000353507 CLEC3BP05452 202 aa9.39□□□□□ -0.91
DDX4-201ENST00000353507 FGF6P10767 208 aa9.39□□□□□ -0.91
DDX4-201ENST00000353507 UQCRFS1P47985 274 aa9.39□□□□□ -0.91
DDX4-201ENST00000353507 KLRB1Q12918 225 aa9.39□□□□□ -0.91
DDX4-201ENST00000353507 SLC50A1Q9BRV3 221 aa9.39□□□□□ -0.91
DDX4-201ENST00000353507 RBX1P62877 108 aa9.39□□□□□ -0.91
DDX4-201ENST00000353507 PAX8Q06710 450 aa9.39□□□□□ -0.91
DDX4-201ENST00000353507 FOXE3Q13461 319 aa9.39□□□□□ -0.91
DDX4-201ENST00000353507 IL17RELQ6ZVW7 336 aa9.39□□□□□ -0.91
DDX4-201ENST00000353507 C18orf15Q96N68 181 aa9.39□□□□□ -0.91
DDX4-201ENST00000353507 SIRPDQ9H106 197 aa9.39□□□□□ -0.91
DDX4-201ENST00000353507 ZFAND3Q9H8U3 227 aa9.39□□□□□ -0.91
DDX4-201ENST00000353507 A1L4Q6 167 aa9.38□□□□□ -0.91
DDX4-201ENST00000353507 SMAD7O15105 426 aaKnown RBP9.38□□□□□ -0.91
DDX4-201ENST00000353507 BUB3O43684 328 aa9.38□□□□□ -0.91
DDX4-201ENST00000353507 NMUP48645 174 aa9.38□□□□□ -0.91
DDX4-201ENST00000353507 LINC01559Q495D7 138 aa9.38□□□□□ -0.91
DDX4-201ENST00000353507 BOD1L2Q8IYS8 172 aa9.38□□□□□ -0.91
DDX4-201ENST00000353507 RNF185Q96GF1 192 aa9.38□□□□□ -0.91
DDX4-201ENST00000353507 AP1S3Q96PC3 154 aa9.38□□□□□ -0.91
DDX4-201ENST00000353507 CNFNQ9BYD5 112 aa9.38□□□□□ -0.91
DDX4-201ENST00000353507 IGF2RP11717 2491 aa9.38□□□□□ -0.91
DDX4-201ENST00000353507 A6NDN8 102 aa9.38□□□□□ -0.91
DDX4-201ENST00000353507 NDUFS7O75251 213 aa9.38□□□□□ -0.91
DDX4-201ENST00000353507 PPIFP30405 207 aaKnown RBP9.38□□□□□ -0.91
DDX4-201ENST00000353507 CLEC19AQ6UXS0 136 aa9.38□□□□□ -0.91
DDX4-201ENST00000353507 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.38□□□□□ -0.91
DDX4-201ENST00000353507 OR9G4Q8NGQ1 327 aa9.38□□□□□ -0.91
DDX4-201ENST00000353507 CSMD1Q96PZ7 3565 aa9.38□□□□□ -0.91
DDX4-201ENST00000353507 IGHV3OR16-13A0A075B7E8 117 aa9.37□□□□□ -0.91
DDX4-201ENST00000353507 IGHV3-74A0A0B4J1X5 117 aa9.37□□□□□ -0.91
DDX4-201ENST00000353507 RBAKDNA6NC62 111 aa9.37□□□□□ -0.91
DDX4-201ENST00000353507 COL6A6A6NMZ7 2263 aa9.37□□□□□ -0.91
DDX4-201ENST00000353507 EVI2AP22794 236 aa9.37□□□□□ -0.91
DDX4-201ENST00000353507 RNF151Q2KHN1 245 aa9.37□□□□□ -0.91
DDX4-201ENST00000353507 DTX2Q86UW9 622 aa9.37□□□□□ -0.91
DDX4-201ENST00000353507 RELNP78509 3460 aa9.37□□□□□ -0.91
DDX4-201ENST00000353507 TRAV8-6A0A0B4J262 113 aa9.37□□□□□ -0.91
DDX4-201ENST00000353507 TNFRSF6BO95407 300 aa9.37□□□□□ -0.91
DDX4-201ENST00000353507 LEPP41159 167 aa9.37□□□□□ -0.91
DDX4-201ENST00000353507 UBE2E1P51965 193 aa9.37□□□□□ -0.91
DDX4-201ENST00000353507 HSD52Q0P140 79 aa9.37□□□□□ -0.91
DDX4-201ENST00000353507 NXT2Q9NPJ8 142 aaKnown RBP9.37□□□□□ -0.91
DDX4-201ENST00000353507 ATRXP46100 2492 aa9.37□□□□□ -0.91
DDX4-201ENST00000353507 TMEM78Q5T7P6 136 aa9.36□□□□□ -0.91
DDX4-201ENST00000353507 EEF1AKMT3Q96AZ1 226 aa9.36□□□□□ -0.91
DDX4-201ENST00000353507 DKK2Q9UBU2 259 aa9.36□□□□□ -0.91
DDX4-201ENST00000353507 IGHV3-49A0A0A0MS15 119 aa9.36□□□□□ -0.91
DDX4-201ENST00000353507 SAA4P35542 130 aa9.36□□□□□ -0.91
DDX4-201ENST00000353507 METTL26Q96S19 204 aa9.36□□□□□ -0.91
DDX4-201ENST00000353507 G3V318 75 aa9.35□□□□□ -0.91
DDX4-201ENST00000353507 FCER1GP30273 86 aa9.35□□□□□ -0.91
DDX4-201ENST00000353507 CDKN1BP46527 198 aa9.35□□□□□ -0.91
DDX4-201ENST00000353507 UCNP55089 124 aa9.35□□□□□ -0.91
DDX4-201ENST00000353507 SMIM15Q7Z3B0 74 aa9.35□□□□□ -0.91
DDX4-201ENST00000353507 ZNF575Q86XF7 245 aa9.35□□□□□ -0.91
DDX4-201ENST00000353507 OR4X2Q8NGF9 303 aa9.35□□□□□ -0.91
DDX4-201ENST00000353507 CCDC140Q96MF4 163 aa9.35□□□□□ -0.91
DDX4-201ENST00000353507 NPFFR1Q9GZQ6 430 aa9.35□□□□□ -0.91
DDX4-201ENST00000353507 CST9LQ9H4G1 147 aa9.35□□□□□ -0.91
DDX4-201ENST00000353507 SIVA1O15304 175 aa9.35□□□□□ -0.91
DDX4-201ENST00000353507 ZNF207O43670 478 aaKnown RBP9.35□□□□□ -0.91
DDX4-201ENST00000353507 GAS8-AS1O95177 125 aa9.35□□□□□ -0.91
DDX4-201ENST00000353507 UBTD1Q9HAC8 227 aa9.35□□□□□ -0.91
DDX4-201ENST00000353507 PRSS1P07477 247 aa9.35□□□□□ -0.91
DDX4-201ENST00000353507 PCP2Q8IVA1 136 aa9.35□□□□□ -0.91
DDX4-201ENST00000353507 AGPAT4-IT1Q9H0P7 198 aa9.35□□□□□ -0.91
DDX4-201ENST00000353507 RAXQ9Y2V3 346 aa9.35□□□□□ -0.91
DDX4-201ENST00000353507 CLPSL1A2RUU4 121 aa9.34□□□□□ -0.91
DDX4-201ENST00000353507 UFC1Q9Y3C8 167 aa9.34□□□□□ -0.91
DDX4-201ENST00000353507 IGKV3D-20A0A0C4DH25 116 aa9.34□□□□□ -0.91
DDX4-201ENST00000353507 GAGE10A6NGK3 116 aa9.34□□□□□ -0.91
DDX4-201ENST00000353507 H3BRM9 83 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms