RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 ANKRD39Q53RE8 183 aa12.88□□□□□ -0.35
PDAP1-201ENST00000350498 VGLL1Q99990 258 aa12.88□□□□□ -0.35
PDAP1-201ENST00000350498 SIGLEC8Q9NYZ4 499 aa12.88□□□□□ -0.35
PDAP1-201ENST00000350498 HSPB8Q9UJY1 196 aa12.88□□□□□ -0.35
PDAP1-201ENST00000350498 ZNF207O43670 478 aaKnown RBP12.87□□□□□ -0.35
PDAP1-201ENST00000350498 SH2D1AO60880 128 aa12.87□□□□□ -0.35
PDAP1-201ENST00000350498 IGHG4P01861 327 aa12.87□□□□□ -0.35
PDAP1-201ENST00000350498 C2orf91Q6ZV80 131 aa12.87□□□□□ -0.35
PDAP1-201ENST00000350498 EBI3Q14213 229 aa12.87□□□□□ -0.35
PDAP1-201ENST00000350498 C15orf32Q32M92 178 aa12.87□□□□□ -0.35
PDAP1-201ENST00000350498 AMMECR1LQ6DCA0 310 aa12.87□□□□□ -0.35
PDAP1-201ENST00000350498 CCDC144NLQ6NUI1 221 aa12.87□□□□□ -0.35
PDAP1-201ENST00000350498 MSRB1Q9NZV6 116 aa12.87□□□□□ -0.35
PDAP1-201ENST00000350498 CLEC3BP05452 202 aa12.86□□□□□ -0.35
PDAP1-201ENST00000350498 RNF151Q2KHN1 245 aa12.86□□□□□ -0.35
PDAP1-201ENST00000350498 RNF182Q8N6D2 247 aa12.86□□□□□ -0.35
PDAP1-201ENST00000350498 ZFYVE26Q68DK2 2539 aa12.85□□□□□ -0.35
PDAP1-201ENST00000350498 ZANQ9Y493 2812 aa12.85□□□□□ -0.35
PDAP1-201ENST00000350498 K7EQM0 130 aa12.85□□□□□ -0.35
PDAP1-201ENST00000350498 EFNA4P52798 201 aa12.85□□□□□ -0.35
PDAP1-201ENST00000350498 RHOGP84095 191 aa12.85□□□□□ -0.35
PDAP1-201ENST00000350498 BRD3OSQ6XYD6 125 aa12.85□□□□□ -0.35
PDAP1-201ENST00000350498 C1orf122Q6ZSJ8 110 aa12.85□□□□□ -0.35
PDAP1-201ENST00000350498 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.85□□□□□ -0.354e-7■■□□□ 13.3
PDAP1-201ENST00000350498 TMEM189A5PLL7 270 aa12.85□□□□□ -0.35
PDAP1-201ENST00000350498 PRAC2D3DTV9 90 aa12.85□□□□□ -0.35
PDAP1-201ENST00000350498 CT45A10P0DMU9 189 aa12.85□□□□□ -0.35
PDAP1-201ENST00000350498 ERCC8Q13216 396 aa12.85□□□□□ -0.35
PDAP1-201ENST00000350498 DEFB125Q8N687 156 aa12.85□□□□□ -0.35
PDAP1-201ENST00000350498 OR10AG1Q8NH19 301 aa12.85□□□□□ -0.35
PDAP1-201ENST00000350498 NAA38Q9BRA0 125 aaKnown RBP12.85□□□□□ -0.35
PDAP1-201ENST00000350498 TRAV8-6A0A0B4J262 113 aa12.84□□□□□ -0.35
PDAP1-201ENST00000350498 MINOS1Q5TGZ0 78 aa12.84□□□□□ -0.35
PDAP1-201ENST00000350498 ZNF575Q86XF7 245 aa12.84□□□□□ -0.35
PDAP1-201ENST00000350498 PRELID3AQ96N28 172 aa12.84□□□□□ -0.35
PDAP1-201ENST00000350498 MINOS1-NBL1R4GNA1 71 aa12.84□□□□□ -0.35
PDAP1-201ENST00000350498 POLQO75417 2590 aa12.84□□□□□ -0.35
PDAP1-201ENST00000350498 TRAV30A0A087WSZ9 112 aa12.84□□□□□ -0.35
PDAP1-201ENST00000350498 PPIFP30405 207 aaKnown RBP12.84□□□□□ -0.35
PDAP1-201ENST00000350498 MRPL51Q4U2R6 128 aaKnown RBP12.84□□□□□ -0.35
PDAP1-201ENST00000350498 CLEC19AQ6UXS0 136 aa12.84□□□□□ -0.35
PDAP1-201ENST00000350498 AAMDCQ9H7C9 122 aa12.84□□□□□ -0.35
PDAP1-201ENST00000350498 TRBV6-1A0A0K0K1D8 114 aa12.83□□□□□ -0.36
PDAP1-201ENST00000350498 UBE2E1P51965 193 aa12.83□□□□□ -0.36
PDAP1-201ENST00000350498 CACNG7P62955 275 aa12.83□□□□□ -0.36
PDAP1-201ENST00000350498 CSPG4Q6UVK1 2322 aa12.83□□□□□ -0.36
PDAP1-201ENST00000350498 CENPVL3A0A0U1RRI6 287 aa12.83□□□□□ -0.36
PDAP1-201ENST00000350498 NPYP01303 97 aa12.83□□□□□ -0.36
PDAP1-201ENST00000350498 IGHV4-39P01824 125 aa12.83□□□□□ -0.36
PDAP1-201ENST00000350498 PSG9Q00887 426 aa12.83□□□□□ -0.36
PDAP1-201ENST00000350498 FAM104BQ5XKR9 115 aa12.83□□□□□ -0.36
PDAP1-201ENST00000350498 PRSS57Q6UWY2 283 aa12.83□□□□□ -0.36
PDAP1-201ENST00000350498 MYO18BQ8IUG5 2567 aa12.82□□□□□ -0.36
PDAP1-201ENST00000350498 COX8AP10176 69 aa12.82□□□□□ -0.36
PDAP1-201ENST00000350498 CSN1S1P47710 185 aa12.82□□□□□ -0.36
PDAP1-201ENST00000350498 TWIST1Q15672 202 aa12.82□□□□□ -0.36
PDAP1-201ENST00000350498 CCDC140Q96MF4 163 aa12.82□□□□□ -0.36
PDAP1-201ENST00000350498 Q6ZQT7 251 aa12.82□□□□□ -0.36
PDAP1-201ENST00000350498 C18orf15Q96N68 181 aa12.82□□□□□ -0.36
PDAP1-201ENST00000350498 PRORYQ9H606 182 aa12.82□□□□□ -0.36
PDAP1-201ENST00000350498 THYN1Q9P016 225 aa12.82□□□□□ -0.36
PDAP1-201ENST00000350498 RABAC1Q9UI14 185 aa12.82□□□□□ -0.36
PDAP1-201ENST00000350498 LYPD1Q8N2G4 141 aa12.81□□□□□ -0.36
PDAP1-201ENST00000350498 PRR25Q96S07 402 aa12.81□□□□□ -0.36
PDAP1-201ENST00000350498 FGF6P10767 208 aa12.81□□□□□ -0.36
PDAP1-201ENST00000350498 HIST1H1AQ02539 215 aaPredicted RBP12.81□□□□□ -0.36
PDAP1-201ENST00000350498 C12orf54Q6X4T0 127 aa12.81□□□□□ -0.36
PDAP1-201ENST00000350498 ZNF493Q6ZR52 646 aa12.81□□□□□ -0.36
PDAP1-201ENST00000350498 GATD1Q8NB37 220 aa12.81□□□□□ -0.36
PDAP1-201ENST00000350498 ZNF502Q8TBZ5 544 aa12.81□□□□□ -0.36
PDAP1-201ENST00000350498 K7EP13 123 aa12.8□□□□□ -0.36
PDAP1-201ENST00000350498 MS4A6AQ9H2W1 248 aa12.8□□□□□ -0.36
PDAP1-201ENST00000350498 CLPSL1A2RUU4 121 aa12.8□□□□□ -0.36
PDAP1-201ENST00000350498 NPFFO15130 113 aa12.8□□□□□ -0.36
PDAP1-201ENST00000350498 GATA1P15976 413 aaPredicted RBP12.8□□□□□ -0.36
PDAP1-201ENST00000350498 ORMDL3Q8N138 153 aa12.8□□□□□ -0.36
PDAP1-201ENST00000350498 ZNF48Q96MX3 618 aaPredicted RBP12.8□□□□□ -0.36
PDAP1-201ENST00000350498 ZFAND3Q9H8U3 227 aa12.8□□□□□ -0.36
PDAP1-201ENST00000350498 ACACBO00763 2458 aa12.79□□□□□ -0.36
PDAP1-201ENST00000350498 OOSP1A8MZH6 123 aa12.79□□□□□ -0.36
PDAP1-201ENST00000350498 CKS2P33552 79 aa12.79□□□□□ -0.36
PDAP1-201ENST00000350498 DKK2Q9UBU2 259 aa12.79□□□□□ -0.36
PDAP1-201ENST00000350498 CACNA1AO00555 2505 aa12.79□□□□□ -0.36
PDAP1-201ENST00000350498 IGHV4-61A0A0C4DH41 118 aa12.79□□□□□ -0.36
PDAP1-201ENST00000350498 RPL7P18124 248 aaKnown RBP12.79□□□□□ -0.36
PDAP1-201ENST00000350498 EVI2AP22794 236 aa12.79□□□□□ -0.36
PDAP1-201ENST00000350498 PCP2Q8IVA1 136 aa12.79□□□□□ -0.36
PDAP1-201ENST00000350498 FAM110DQ8TAY7 271 aaPredicted RBP12.79□□□□□ -0.36
PDAP1-201ENST00000350498 TTTY13Q9BZ97 58 aa12.79□□□□□ -0.36
PDAP1-201ENST00000350498 ORM1P02763 201 aa12.78□□□□□ -0.36
PDAP1-201ENST00000350498 C7orf71A4D174 169 aa12.78□□□□□ -0.36
PDAP1-201ENST00000350498 PAX8Q06710 450 aa12.78□□□□□ -0.36
PDAP1-201ENST00000350498 PDE6HQ13956 83 aa12.78□□□□□ -0.36
PDAP1-201ENST00000350498 TM4SF20Q53R12 229 aa12.78□□□□□ -0.36
PDAP1-201ENST00000350498 NRGNQ92686 78 aa12.78□□□□□ -0.36
PDAP1-201ENST00000350498 USP9YO00507 2555 aaPredicted RBP12.77□□□□□ -0.36
PDAP1-201ENST00000350498 BUB3O43684 328 aa12.77□□□□□ -0.37
PDAP1-201ENST00000350498 LY6EQ16553 131 aa12.77□□□□□ -0.37
PDAP1-201ENST00000350498 LCNL1Q6ZST4 164 aa12.77□□□□□ -0.37
PDAP1-201ENST00000350498 FER1L6-AS1Q8NA97 138 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms