RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 CADP27708 2225 aa8.08□□□□□ -1.12
CHRNA1-202ENST00000348749 TRAV40A0A0B4J280 105 aa8.08□□□□□ -1.12
CHRNA1-202ENST00000348749 PPIFP30405 207 aaKnown RBP8.08□□□□□ -1.12
CHRNA1-202ENST00000348749 SRSF2Q01130 221 aaKnown RBP8.08□□□□□ -1.12
CHRNA1-202ENST00000348749 PLGLAQ15195 96 aa8.08□□□□□ -1.12
CHRNA1-202ENST00000348749 C17orf77Q96MU5 243 aa8.08□□□□□ -1.12
CHRNA1-202ENST00000348749 ANAPC13Q9BS18 74 aa8.08□□□□□ -1.12
CHRNA1-202ENST00000348749 TMEM133Q9H2Q1 129 aa8.08□□□□□ -1.12
CHRNA1-202ENST00000348749 TPSG1Q9NRR2 321 aa8.08□□□□□ -1.12
CHRNA1-202ENST00000348749 SS18L2Q9UHA2 77 aa8.08□□□□□ -1.12
CHRNA1-202ENST00000348749 URB1O60287 2271 aaKnown RBP8.07□□□□□ -1.12
CHRNA1-202ENST00000348749 HOXA3O43365 443 aaPredicted RBP8.07□□□□□ -1.12
CHRNA1-202ENST00000348749 TMEM95Q3KNT9 176 aa8.07□□□□□ -1.12
CHRNA1-202ENST00000348749 PIP4P1Q86T03 277 aa8.07□□□□□ -1.12
CHRNA1-202ENST00000348749 CNFNQ9BYD5 112 aa8.07□□□□□ -1.12
CHRNA1-202ENST00000348749 TMEM160Q9NX00 188 aa8.07□□□□□ -1.12
CHRNA1-202ENST00000348749 A0A087WX48 190 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 TMSB15BA0A087X1C1 80 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 NCBP2LA6PVI3 153 aaKnown RBP8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 MRPS12O15235 138 aaKnown RBP8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 TNFRSF6BO95407 300 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 IL4P05112 153 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 IGHV1-8P0DP01 117 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 PLNP26678 52 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 CCL8P80075 99 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 ADIPOQQ15848 244 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 Q8N8P6 123 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 RPEQ96AT9 228 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 MRPL35Q9NZE8 188 aaKnown RBP8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 SIGLEC9Q9Y336 463 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 NAV3Q8IVL0 2385 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 FRYLO94915 3013 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 IGLV2-18A0A075B6J9 118 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 IGHV3-21A0A0B4J1V1 117 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 RBP4P02753 201 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 LOXP28300 417 aaPredicted RBP8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 NBL1P41271 181 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 PDE6HQ13956 83 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 TEN1Q86WV5 123 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 GLMPQ8WWB7 406 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 CARD19Q96LW7 228 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 RASL11BQ9BPW5 248 aa8.06□□□□□ -1.12
CHRNA1-202ENST00000348749 MYMXA0A1B0GTQ4 84 aa8.05□□□□□ -1.12
CHRNA1-202ENST00000348749 FCN3O75636 299 aa8.05□□□□□ -1.12
CHRNA1-202ENST00000348749 WT1P19544 449 aaPredicted RBP8.05□□□□□ -1.12
CHRNA1-202ENST00000348749 DEFB109BQ30KR1 87 aa8.05□□□□□ -1.12
CHRNA1-202ENST00000348749 LYRM7Q5U5X0 104 aa8.05□□□□□ -1.12
CHRNA1-202ENST00000348749 ZFAND6Q6FIF0 208 aa8.05□□□□□ -1.12
CHRNA1-202ENST00000348749 SBSPONQ8IVN8 264 aa8.05□□□□□ -1.12
CHRNA1-202ENST00000348749 FAM57AQ8TBR7 257 aa8.05□□□□□ -1.12
CHRNA1-202ENST00000348749 FREM2Q5SZK8 3169 aa8.05□□□□□ -1.12
CHRNA1-202ENST00000348749 PLCE1Q9P212 2302 aa8.05□□□□□ -1.12
CHRNA1-202ENST00000348749 TEX22C9J3V5 150 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 TMEM262E9PQX1 116 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 I3L2K1 104 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 ENSAO43768 121 aaKnown RBP8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 EGR2P11161 476 aaPredicted RBP8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 UBE2D3P61077 147 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 UBE2D2P62837 147 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 DIAPH2-AS1Q14236 149 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 PPP1R27Q86WC6 154 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 MYOZ3Q8TDC0 251 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 PSMG3-AS1Q96PY0 264 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 FAM110AQ9BQ89 295 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 AAMDCQ9H7C9 122 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 RALYQ9UKM9 306 aaKnown RBP8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 AGRNO00468 2067 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 TRAV12-1A0A0B4J245 112 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 PRSS29PA6NIE9 313 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 M0R3E3 92 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 IGKV1-17P01599 117 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 IGLV1-47P01700 117 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 ZNF688P0C7X2 276 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 UBE2D1P51668 147 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 FAM27E3Q08E93 113 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 CITED1Q99966 193 aa8.04□□□□□ -1.12
CHRNA1-202ENST00000348749 WDFY4Q6ZS81 3184 aa8.03□□□□□ -1.12
CHRNA1-202ENST00000348749 GAS8-AS1O95177 125 aa8.03□□□□□ -1.12
CHRNA1-202ENST00000348749 SRD5A1P18405 259 aa8.03□□□□□ -1.12
CHRNA1-202ENST00000348749 ZNF575Q86XF7 245 aa8.03□□□□□ -1.12
CHRNA1-202ENST00000348749 PRR25Q96S07 402 aa8.03□□□□□ -1.12
CHRNA1-202ENST00000348749 PSMB2P49721 201 aa8.02□□□□□ -1.12
CHRNA1-202ENST00000348749 TEX29Q8N6K0 151 aa8.02□□□□□ -1.12
CHRNA1-202ENST00000348749 RAB1BQ9H0U4 201 aa8.02□□□□□ -1.12
CHRNA1-202ENST00000348749 CTSZQ9UBR2 303 aa8.02□□□□□ -1.12
CHRNA1-202ENST00000348749 FRYQ5TBA9 3013 aa8.02□□□□□ -1.13
CHRNA1-202ENST00000348749 ZFHX2Q9C0A1 2572 aaPredicted RBP8.02□□□□□ -1.13
CHRNA1-202ENST00000348749 IGHV1-3A0A0C4DH29 117 aa8.02□□□□□ -1.13
CHRNA1-202ENST00000348749 F8VRH5 84 aa8.02□□□□□ -1.13
CHRNA1-202ENST00000348749 H7C1H1 209 aa8.02□□□□□ -1.13
CHRNA1-202ENST00000348749 LGALS1P09382 135 aaKnown RBP8.02□□□□□ -1.13
CHRNA1-202ENST00000348749 NHLRC4P0CG21 123 aaPredicted RBP8.02□□□□□ -1.13
CHRNA1-202ENST00000348749 LAGE3Q14657 143 aa8.02□□□□□ -1.13
CHRNA1-202ENST00000348749 LYPD2Q6UXB3 125 aa8.02□□□□□ -1.13
CHRNA1-202ENST00000348749 ZNF491Q8N8L2 437 aa8.02□□□□□ -1.13
CHRNA1-202ENST00000348749 MSRB1Q9NZV6 116 aa8.02□□□□□ -1.13
CHRNA1-202ENST00000348749 UFC1Q9Y3C8 167 aa8.02□□□□□ -1.13
CHRNA1-202ENST00000348749 GPR179Q6PRD1 2367 aa8.02□□□□□ -1.13
CHRNA1-202ENST00000348749 TRBV20-1A0A075B6N2 111 aa8.01□□□□□ -1.13
CHRNA1-202ENST00000348749 LINC01549A6NIU2 74 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms