RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 TP53BP1Q12888 1972 aaPredicted RBP8.95□□□□□ -0.98
SMARCE1-202ENST00000348513 HLA-DRB4P13762 266 aa8.95□□□□□ -0.98
SMARCE1-202ENST00000348513 WIPF2Q8TF74 440 aaPredicted RBP8.95□□□□□ -0.98
SMARCE1-202ENST00000348513 HLA-DRB4X5D2U9 266 aa8.95□□□□□ -0.98
SMARCE1-202ENST00000348513 MALP21145 153 aa8.94□□□□□ -0.98
SMARCE1-202ENST00000348513 TMEM42Q69YG0 159 aa8.94□□□□□ -0.98
SMARCE1-202ENST00000348513 FAM19A5Q7Z5A7 132 aaPredicted RBP8.94□□□□□ -0.98
SMARCE1-202ENST00000348513 PCP2Q8IVA1 136 aa8.94□□□□□ -0.98
SMARCE1-202ENST00000348513 C10orf105Q8TEF2 133 aa8.94□□□□□ -0.98
SMARCE1-202ENST00000348513 WDR81Q562E7 1941 aa8.94□□□□□ -0.98
SMARCE1-202ENST00000348513 DUSP14O95147 198 aaKnown RBP8.94□□□□□ -0.98
SMARCE1-202ENST00000348513 CRPP02741 224 aa8.94□□□□□ -0.98
SMARCE1-202ENST00000348513 GAFA1Q96PS6 74 aa8.94□□□□□ -0.98
SMARCE1-202ENST00000348513 NTF4P34130 210 aa8.94□□□□□ -0.98
SMARCE1-202ENST00000348513 FXYD2P54710 66 aa8.94□□□□□ -0.98
SMARCE1-202ENST00000348513 LINC01545Q5VT33 79 aa8.94□□□□□ -0.98
SMARCE1-202ENST00000348513 BPESC1Q9GZL8 116 aa8.94□□□□□ -0.98
SMARCE1-202ENST00000348513 VWA8A3KMH1 1905 aa8.94□□□□□ -0.98
SMARCE1-202ENST00000348513 ZSWIM8A7E2V4 1837 aa8.94□□□□□ -0.98
SMARCE1-202ENST00000348513 TINCRA0A1B0GVN0 87 aa8.93□□□□□ -0.98
SMARCE1-202ENST00000348513 K7EN84 100 aa8.93□□□□□ -0.98
SMARCE1-202ENST00000348513 SLC25A16P16260 332 aa8.93□□□□□ -0.98
SMARCE1-202ENST00000348513 RPL35AP18077 110 aaKnown RBP8.93□□□□□ -0.98
SMARCE1-202ENST00000348513 DEFB121Q5J5C9 76 aa8.93□□□□□ -0.98
SMARCE1-202ENST00000348513 EXOC3-AS1Q8N2X6 119 aa8.93□□□□□ -0.98
SMARCE1-202ENST00000348513 PMS2P5A8MQ11 134 aa8.93□□□□□ -0.98
SMARCE1-202ENST00000348513 DSCR9P59020 149 aa8.93□□□□□ -0.98
SMARCE1-202ENST00000348513 IGFL4Q6B9Z1 124 aa8.93□□□□□ -0.98
SMARCE1-202ENST00000348513 COL6A6A6NMZ7 2263 aa8.93□□□□□ -0.98
SMARCE1-202ENST00000348513 TREML4Q6UXN2 200 aa8.93□□□□□ -0.98
SMARCE1-202ENST00000348513 B4DSR2 109 aa8.93□□□□□ -0.98
SMARCE1-202ENST00000348513 CRLF1O75462 422 aa8.93□□□□□ -0.98
SMARCE1-202ENST00000348513 CACNA1DQ01668 2161 aa8.93□□□□□ -0.98
SMARCE1-202ENST00000348513 LYZL1Q6UWQ5 148 aa8.93□□□□□ -0.98
SMARCE1-202ENST00000348513 TMEM14EPQ6UXP3 125 aa8.93□□□□□ -0.98
SMARCE1-202ENST00000348513 ZNRD1Q9P1U0 126 aa8.93□□□□□ -0.98
SMARCE1-202ENST00000348513 MBD3L4A6NDZ8 208 aaPredicted RBP8.92□□□□□ -0.98
SMARCE1-202ENST00000348513 MBD3L3A6NE82 208 aaPredicted RBP8.92□□□□□ -0.98
SMARCE1-202ENST00000348513 MBD3L5A6NJ08 208 aaPredicted RBP8.92□□□□□ -0.98
SMARCE1-202ENST00000348513 Q6ZS92 163 aa8.92□□□□□ -0.98
SMARCE1-202ENST00000348513 MBD3L2Q8NHZ7 208 aaPredicted RBP8.92□□□□□ -0.98
SMARCE1-202ENST00000348513 MYO7BQ6PIF6 2116 aa8.92□□□□□ -0.98
SMARCE1-202ENST00000348513 IGHG2P01859 326 aa8.92□□□□□ -0.98
SMARCE1-202ENST00000348513 CFC1BP0CG36 223 aa8.92□□□□□ -0.98
SMARCE1-202ENST00000348513 CFC1P0CG37 223 aa8.92□□□□□ -0.98
SMARCE1-202ENST00000348513 C20orf204Q6ZNR8 217 aa8.92□□□□□ -0.98
SMARCE1-202ENST00000348513 TCF20Q9UGU0 1960 aaKnown RBP8.92□□□□□ -0.98
SMARCE1-202ENST00000348513 RUSC1-AS1Q66K80 236 aa8.92□□□□□ -0.98
SMARCE1-202ENST00000348513 ZNF625Q96I27 306 aaPredicted RBP8.92□□□□□ -0.98
SMARCE1-202ENST00000348513 IGKV1D-17A0A075B6S4 117 aa8.92□□□□□ -0.98
SMARCE1-202ENST00000348513 ZNF747Q9BV97 191 aa8.92□□□□□ -0.98
SMARCE1-202ENST00000348513 WIPF3A6NGB9 483 aa8.92□□□□□ -0.98
SMARCE1-202ENST00000348513 RNF223E7ERA6 249 aa8.92□□□□□ -0.98
SMARCE1-202ENST00000348513 PPDPFQ9H3Y8 114 aa8.92□□□□□ -0.98
SMARCE1-202ENST00000348513 E7EQL1 145 aa8.91□□□□□ -0.98
SMARCE1-202ENST00000348513 RS1O15537 224 aa8.91□□□□□ -0.98
SMARCE1-202ENST00000348513 IGLC6P0CF74 106 aa8.91□□□□□ -0.98
SMARCE1-202ENST00000348513 BUB1B-PAK6H3BSN5 160 aa8.91□□□□□ -0.98
SMARCE1-202ENST00000348513 CTRLP40313 264 aa8.91□□□□□ -0.98
SMARCE1-202ENST00000348513 ZNF492Q9P255 531 aa8.91□□□□□ -0.98
SMARCE1-202ENST00000348513 LINC00473A8K010 186 aa8.91□□□□□ -0.98
SMARCE1-202ENST00000348513 IGHV3-53P01767 116 aa8.91□□□□□ -0.98
SMARCE1-202ENST00000348513 MSRB2Q9Y3D2 182 aa8.91□□□□□ -0.98
SMARCE1-202ENST00000348513 A0A0U1RRA0 63 aa8.91□□□□□ -0.98
SMARCE1-202ENST00000348513 SP5Q6BEB4 398 aaPredicted RBP8.91□□□□□ -0.98
SMARCE1-202ENST00000348513 MPDZO75970 2070 aa8.91□□□□□ -0.98
SMARCE1-202ENST00000348513 FNDC1Q4ZHG4 1894 aaPredicted RBP8.91□□□□□ -0.98
SMARCE1-202ENST00000348513 FAM90A9PA6NNJ1 464 aa8.9□□□□□ -0.98
SMARCE1-202ENST00000348513 E9PQ18 207 aa8.9□□□□□ -0.98
SMARCE1-202ENST00000348513 TRBV25-1A0A075B6N4 114 aa8.9□□□□□ -0.98
SMARCE1-202ENST00000348513 MPLKIPQ8TAP9 179 aa8.9□□□□□ -0.98
SMARCE1-202ENST00000348513 KLHL30-AS1Q8NEE0 82 aa8.9□□□□□ -0.98
SMARCE1-202ENST00000348513 DKK2Q9UBU2 259 aa8.9□□□□□ -0.98
SMARCE1-202ENST00000348513 TMEM213A2RRL7 107 aa8.9□□□□□ -0.99
SMARCE1-202ENST00000348513 IGKV1-5P01602 117 aa8.9□□□□□ -0.99
SMARCE1-202ENST00000348513 CRYGBP07316 175 aa8.9□□□□□ -0.99
SMARCE1-202ENST00000348513 Q6P435 159 aa8.9□□□□□ -0.99
SMARCE1-202ENST00000348513 FAM231DQ6ZW35 169 aa8.9□□□□□ -0.99
SMARCE1-202ENST00000348513 Q71RC1 249 aaPredicted RBP8.9□□□□□ -0.99
SMARCE1-202ENST00000348513 SHISA9B4DS77 424 aa8.9□□□□□ -0.99
SMARCE1-202ENST00000348513 LEPROTO15243 131 aa8.9□□□□□ -0.99
SMARCE1-202ENST00000348513 PSMB8P28062 276 aa8.9□□□□□ -0.99
SMARCE1-202ENST00000348513 DOCK8Q8NF50 2099 aa8.89□□□□□ -0.99
SMARCE1-202ENST00000348513 CYYR1Q96J86 154 aa8.89□□□□□ -0.99
SMARCE1-202ENST00000348513 PRO0628Q9UI54 55 aa8.89□□□□□ -0.99
SMARCE1-202ENST00000348513 RHODO00212 210 aa8.89□□□□□ -0.99
SMARCE1-202ENST00000348513 IGHG3P01860 377 aa8.89□□□□□ -0.99
SMARCE1-202ENST00000348513 VPREB1P12018 145 aa8.89□□□□□ -0.99
SMARCE1-202ENST00000348513 CR1LQ2VPA4 569 aa8.89□□□□□ -0.99
SMARCE1-202ENST00000348513 PIP4P2Q8N4L2 257 aa8.89□□□□□ -0.99
SMARCE1-202ENST00000348513 LINC00643Q86TS7 51 aa8.89□□□□□ -0.99
SMARCE1-202ENST00000348513 Q8TAT8 98 aa8.89□□□□□ -0.99
SMARCE1-202ENST00000348513 YPEL4Q96NS1 127 aa8.89□□□□□ -0.99
SMARCE1-202ENST00000348513 ACACAQ13085 2346 aa8.89□□□□□ -0.99
SMARCE1-202ENST00000348513 TRBV10-2A0A0K0K1G8 114 aa8.89□□□□□ -0.99
SMARCE1-202ENST00000348513 NDUFS7O75251 213 aa8.89□□□□□ -0.99
SMARCE1-202ENST00000348513 CD28P10747 220 aa8.89□□□□□ -0.99
SMARCE1-202ENST00000348513 SAA4P35542 130 aa8.89□□□□□ -0.99
SMARCE1-202ENST00000348513 LINC01620Q4KN68 170 aa8.89□□□□□ -0.99
SMARCE1-202ENST00000348513 UBE2E2Q96LR5 201 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms