RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 LINC00336Q6ZUF6 198 aa9.32□□□□□ -0.92
CLCC1-202ENST00000348264 LINC00612Q8N6U2 182 aa9.32□□□□□ -0.92
CLCC1-202ENST00000348264 FXYD5Q96DB9 178 aa9.32□□□□□ -0.92
CLCC1-202ENST00000348264 PHYHIPLQ96FC7 376 aa9.32□□□□□ -0.92
CLCC1-202ENST00000348264 SMIM3Q9BZL3 60 aa9.32□□□□□ -0.92
CLCC1-202ENST00000348264 AGPAT4-IT1Q9H0P7 198 aa9.32□□□□□ -0.92
CLCC1-202ENST00000348264 OR51M1Q9H341 326 aa9.32□□□□□ -0.92
CLCC1-202ENST00000348264 AAMDCQ9H7C9 122 aa9.32□□□□□ -0.92
CLCC1-202ENST00000348264 FUT9Q9Y231 359 aa9.32□□□□□ -0.92
CLCC1-202ENST00000348264 DNAH11Q96DT5 4516 aa9.32□□□□□ -0.92
CLCC1-202ENST00000348264 C7orf71A4D174 169 aa9.31□□□□□ -0.92
CLCC1-202ENST00000348264 C17orf112F2Z3M2 114 aa9.31□□□□□ -0.92
CLCC1-202ENST00000348264 SLC25A5P05141 298 aaKnown RBP9.31□□□□□ -0.92
CLCC1-202ENST00000348264 NBEAP1P0C6P0 100 aa9.31□□□□□ -0.92
CLCC1-202ENST00000348264 CD300CQ08708 224 aa9.31□□□□□ -0.92
CLCC1-202ENST00000348264 BTN1A1Q13410 526 aa9.31□□□□□ -0.92
CLCC1-202ENST00000348264 CCDC28AQ8IWP9 274 aa9.31□□□□□ -0.92
CLCC1-202ENST00000348264 ZNF503Q96F45 646 aa9.31□□□□□ -0.92
CLCC1-202ENST00000348264 VGLL1Q99990 258 aa9.31□□□□□ -0.92
CLCC1-202ENST00000348264 PYGO2Q9BRQ0 406 aa9.31□□□□□ -0.92
CLCC1-202ENST00000348264 PAXXQ9BUH6 204 aa9.31□□□□□ -0.92
CLCC1-202ENST00000348264 BATF3Q9NR55 127 aa9.31□□□□□ -0.92
CLCC1-202ENST00000348264 PKD1P98161 4303 aa9.3□□□□□ -0.92
CLCC1-202ENST00000348264 A0A1B0GVY2 172 aa9.3□□□□□ -0.92
CLCC1-202ENST00000348264 SNURFLB1AK76 121 aa9.3□□□□□ -0.92
CLCC1-202ENST00000348264 OR7C2O60412 319 aa9.3□□□□□ -0.92
CLCC1-202ENST00000348264 NUDT3O95989 172 aa9.3□□□□□ -0.92
CLCC1-202ENST00000348264 RPL12P30050 165 aaKnown RBP9.3□□□□□ -0.92
CLCC1-202ENST00000348264 FFAR4Q5NUL3 377 aa9.3□□□□□ -0.92
CLCC1-202ENST00000348264 PRR9Q5T870 116 aa9.3□□□□□ -0.92
CLCC1-202ENST00000348264 C9orf47Q6ZRZ4 202 aa9.3□□□□□ -0.92
CLCC1-202ENST00000348264 RNF141Q8WVD5 230 aa9.3□□□□□ -0.92
CLCC1-202ENST00000348264 LINC00477Q96M19 166 aa9.3□□□□□ -0.92
CLCC1-202ENST00000348264 WFDC1Q9HC57 220 aa9.3□□□□□ -0.92
CLCC1-202ENST00000348264 ALG5Q9Y673 324 aa9.3□□□□□ -0.92
CLCC1-202ENST00000348264 GAGE12BA1L429 117 aa9.29□□□□□ -0.92
CLCC1-202ENST00000348264 ZNF324O75467 553 aaPredicted RBP9.29□□□□□ -0.92
CLCC1-202ENST00000348264 EIF3GO75821 320 aaKnown RBP eCLIP9.29□□□□□ -0.92
CLCC1-202ENST00000348264 GAGE7O76087 117 aa9.29□□□□□ -0.92
CLCC1-202ENST00000348264 GAGE12FP0CL80 117 aa9.29□□□□□ -0.92
CLCC1-202ENST00000348264 GAGE12GP0CL81 117 aa9.29□□□□□ -0.92
CLCC1-202ENST00000348264 GAGE12IP0CL82 117 aa9.29□□□□□ -0.92
CLCC1-202ENST00000348264 CRISP2P16562 243 aa9.29□□□□□ -0.92
CLCC1-202ENST00000348264 Q6ZTI0 123 aa9.29□□□□□ -0.92
CLCC1-202ENST00000348264 ZFAND2AQ8N6M9 145 aa9.29□□□□□ -0.92
CLCC1-202ENST00000348264 C11orf72Q8NBR9 251 aa9.29□□□□□ -0.92
CLCC1-202ENST00000348264 PRSS29PA6NIE9 313 aa9.28□□□□□ -0.92
CLCC1-202ENST00000348264 IFNA5P01569 189 aa9.28□□□□□ -0.92
CLCC1-202ENST00000348264 HOXA5P20719 270 aa9.28□□□□□ -0.92
CLCC1-202ENST00000348264 RNASE4P34096 147 aaKnown RBP9.28□□□□□ -0.92
CLCC1-202ENST00000348264 UBE2L3P68036 154 aaKnown RBP9.28□□□□□ -0.92
CLCC1-202ENST00000348264 DAZ2Q13117 558 aaKnown RBP9.28□□□□□ -0.92
CLCC1-202ENST00000348264 TMEM78Q5T7P6 136 aa9.28□□□□□ -0.92
CLCC1-202ENST00000348264 Q6ZQT7 251 aa9.28□□□□□ -0.92
CLCC1-202ENST00000348264 Q8TAT8 98 aa9.28□□□□□ -0.92
CLCC1-202ENST00000348264 ATG101Q9BSB4 218 aa9.28□□□□□ -0.92
CLCC1-202ENST00000348264 GSN-AS1Q9NRJ2 163 aa9.28□□□□□ -0.92
CLCC1-202ENST00000348264 ZNF492Q9P255 531 aa9.28□□□□□ -0.92
CLCC1-202ENST00000348264 TRAV26-1A0A087WT03 109 aa9.27□□□□□ -0.93
CLCC1-202ENST00000348264 GPX1P07203 203 aa9.27□□□□□ -0.93
CLCC1-202ENST00000348264 FAM3BP58499 235 aaPredicted RBP9.27□□□□□ -0.93
CLCC1-202ENST00000348264 OR5I1Q13606 314 aa9.27□□□□□ -0.93
CLCC1-202ENST00000348264 KHDC3LQ587J8 217 aa9.27□□□□□ -0.93
CLCC1-202ENST00000348264 ZNF680Q8NEM1 530 aa9.27□□□□□ -0.93
CLCC1-202ENST00000348264 SCGB1C1Q8TD33 95 aa9.27□□□□□ -0.93
CLCC1-202ENST00000348264 LINC00467Q9BRT7 94 aa9.27□□□□□ -0.93
CLCC1-202ENST00000348264 Q9H3A6 140 aa9.27□□□□□ -0.93
CLCC1-202ENST00000348264 TMPRSS5Q9H3S3 457 aa9.27□□□□□ -0.93
CLCC1-202ENST00000348264 A0A0J9YY99 117 aa9.26□□□□□ -0.93
CLCC1-202ENST00000348264 NMBP08949 121 aa9.26□□□□□ -0.93
CLCC1-202ENST00000348264 M6PRP20645 277 aa9.26□□□□□ -0.93
CLCC1-202ENST00000348264 ZNF138P52744 262 aa9.26□□□□□ -0.93
CLCC1-202ENST00000348264 RANP62826 216 aaKnown RBP9.26□□□□□ -0.93
CLCC1-202ENST00000348264 ANXA2RQ3ZCQ2 193 aa9.26□□□□□ -0.93
CLCC1-202ENST00000348264 EIF4E3Q8N5X7 224 aaKnown RBP9.26□□□□□ -0.93
CLCC1-202ENST00000348264 ZNRF2Q8NHG8 242 aa9.26□□□□□ -0.93
CLCC1-202ENST00000348264 LINC00588Q9Y4M8 146 aa9.26□□□□□ -0.93
CLCC1-202ENST00000348264 PTTG1O95997 202 aa9.25□□□□□ -0.93
CLCC1-202ENST00000348264 TCL1AP56279 114 aa9.25□□□□□ -0.93
CLCC1-202ENST00000348264 TAS2R45P59539 299 aa9.25□□□□□ -0.93
CLCC1-202ENST00000348264 RAB2AP61019 212 aa9.25□□□□□ -0.93
CLCC1-202ENST00000348264 LYPD1Q8N2G4 141 aa9.25□□□□□ -0.93
CLCC1-202ENST00000348264 RXFP4Q8TDU9 374 aa9.25□□□□□ -0.93
CLCC1-202ENST00000348264 GNPNAT1Q96EK6 184 aaPredicted RBP9.25□□□□□ -0.93
CLCC1-202ENST00000348264 TP53TG3Q9ULZ0 132 aa9.25□□□□□ -0.93
CLCC1-202ENST00000348264 KLF12Q9Y4X4 402 aa9.25□□□□□ -0.93
CLCC1-202ENST00000348264 IGHV1OR15-1A0A075B7D0 117 aa9.24□□□□□ -0.93
CLCC1-202ENST00000348264 TRGV1A0A0A0MS02 117 aa9.24□□□□□ -0.93
CLCC1-202ENST00000348264 RBAKDNA6NC62 111 aa9.24□□□□□ -0.93
CLCC1-202ENST00000348264 RGS13O14921 159 aa9.24□□□□□ -0.93
CLCC1-202ENST00000348264 CSN1S1P47710 185 aa9.24□□□□□ -0.93
CLCC1-202ENST00000348264 CCL18P55774 89 aa9.24□□□□□ -0.93
CLCC1-202ENST00000348264 C1orf134Q5TEV5 83 aa9.24□□□□□ -0.93
CLCC1-202ENST00000348264 TRGV2A0A075B6R0 118 aa9.23□□□□□ -0.93
CLCC1-202ENST00000348264 TRBV7-9A0A0J9YWB2 115 aa9.23□□□□□ -0.93
CLCC1-202ENST00000348264 NBDYA0A0U1RRE5 68 aa9.23□□□□□ -0.93
CLCC1-202ENST00000348264 DIRC3C9JPN6 131 aa9.23□□□□□ -0.93
CLCC1-202ENST00000348264 SPINK4O60575 86 aa9.23□□□□□ -0.93
CLCC1-202ENST00000348264 ACOT6Q3I5F7 207 aaPredicted RBP9.23□□□□□ -0.93
CLCC1-202ENST00000348264 IBA57Q5T440 356 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms