RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 TRAV8-2A0A0B4J237 113 aa11.87□□□□□ -0.51
UPF3B-202ENST00000345865 IGLC6P0CF74 106 aa11.87□□□□□ -0.51
UPF3B-202ENST00000345865 FAM104BQ5XKR9 115 aa11.87□□□□□ -0.51
UPF3B-202ENST00000345865 PIMREGQ9BSJ6 248 aa11.87□□□□□ -0.51
UPF3B-202ENST00000345865 OR4C46A6NHA9 309 aa11.87□□□□□ -0.51
UPF3B-202ENST00000345865 FBLL1A6NHQ2 334 aaKnown RBP11.87□□□□□ -0.51
UPF3B-202ENST00000345865 RAB9AP51151 201 aa11.87□□□□□ -0.51
UPF3B-202ENST00000345865 KLHDC1Q8N7A1 406 aa11.87□□□□□ -0.51
UPF3B-202ENST00000345865 IGHV4-30-2A0A087WSY4 118 aa11.86□□□□□ -0.51
UPF3B-202ENST00000345865 S100A7P31151 101 aa11.86□□□□□ -0.51
UPF3B-202ENST00000345865 IFI27P40305 119 aaPredicted RBP11.86□□□□□ -0.51
UPF3B-202ENST00000345865 ATP5G2Q06055 141 aa11.86□□□□□ -0.51
UPF3B-202ENST00000345865 LOXL1Q08397 574 aaPredicted RBP11.86□□□□□ -0.51
UPF3B-202ENST00000345865 IL17RELQ6ZVW7 336 aa11.86□□□□□ -0.51
UPF3B-202ENST00000345865 AP5S1Q9NUS5 200 aa11.86□□□□□ -0.51
UPF3B-202ENST00000345865 MSRB1Q9NZV6 116 aa11.86□□□□□ -0.51
UPF3B-202ENST00000345865 TP73-AS1Q9UF72 201 aa11.86□□□□□ -0.51
UPF3B-202ENST00000345865 TIMM8BQ9Y5J9 83 aaPredicted RBP11.86□□□□□ -0.51
UPF3B-202ENST00000345865 U3KQE9 123 aa11.86□□□□□ -0.51
UPF3B-202ENST00000345865 U3KQK5 164 aa11.86□□□□□ -0.51
UPF3B-202ENST00000345865 BMI1P35226 326 aa11.86□□□□□ -0.51
UPF3B-202ENST00000345865 FER1L6-AS1Q8NA97 138 aa11.86□□□□□ -0.51
UPF3B-202ENST00000345865 MEGF9Q9H1U4 602 aa11.86□□□□□ -0.51
UPF3B-202ENST00000345865 TRBV12-3P01733 135 aa11.85□□□□□ -0.51
UPF3B-202ENST00000345865 RPLP1P05386 114 aaKnown RBP11.85□□□□□ -0.51
UPF3B-202ENST00000345865 OR5AL1P0C617 328 aa11.85□□□□□ -0.51
UPF3B-202ENST00000345865 LY6EQ16553 131 aa11.85□□□□□ -0.51
UPF3B-202ENST00000345865 MRPL51Q4U2R6 128 aaKnown RBP11.85□□□□□ -0.51
UPF3B-202ENST00000345865 DMRTA1Q5VZB9 504 aa11.85□□□□□ -0.51
UPF3B-202ENST00000345865 METTL26Q96S19 204 aa11.85□□□□□ -0.51
UPF3B-202ENST00000345865 AGPAT4-IT1Q9H0P7 198 aa11.85□□□□□ -0.51
UPF3B-202ENST00000345865 A0A096LNJ9 63 aa11.85□□□□□ -0.51
UPF3B-202ENST00000345865 LOC389332A0A1B0GUA5 103 aa11.85□□□□□ -0.51
UPF3B-202ENST00000345865 ORM1P02763 201 aa11.85□□□□□ -0.51
UPF3B-202ENST00000345865 TSPOP30536 169 aa11.85□□□□□ -0.51
UPF3B-202ENST00000345865 TFPI2P48307 235 aa11.85□□□□□ -0.51
UPF3B-202ENST00000345865 HNRNPA3P51991 378 aaKnown RBP11.85□□□□□ -0.51
UPF3B-202ENST00000345865 CRIP2P52943 208 aaPredicted RBP11.85□□□□□ -0.51
UPF3B-202ENST00000345865 PRSS3P2Q8NHM4 247 aa11.85□□□□□ -0.51
UPF3B-202ENST00000345865 hDV102S1A0JD36 115 aa11.84□□□□□ -0.51
UPF3B-202ENST00000345865 FABP5P3A8MUU1 101 aa11.84□□□□□ -0.51
UPF3B-202ENST00000345865 TRGV3P03979 118 aa11.84□□□□□ -0.51
UPF3B-202ENST00000345865 G0S2P27469 103 aa11.84□□□□□ -0.51
UPF3B-202ENST00000345865 TWIST1Q15672 202 aa11.84□□□□□ -0.51
UPF3B-202ENST00000345865 C8orf86Q6ZUL3 223 aa11.84□□□□□ -0.51
UPF3B-202ENST00000345865 SLC50A1Q9BRV3 221 aa11.84□□□□□ -0.51
UPF3B-202ENST00000345865 SIGLEC8Q9NYZ4 499 aa11.84□□□□□ -0.51
UPF3B-202ENST00000345865 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.84□□□□□ -0.515e-7■■■■□ 24.2
UPF3B-202ENST00000345865 RBAKDNA6NC62 111 aa11.83□□□□□ -0.51
UPF3B-202ENST00000345865 H0Y8G0 127 aa11.83□□□□□ -0.51
UPF3B-202ENST00000345865 SMKR1H3BMG3 65 aa11.83□□□□□ -0.51
UPF3B-202ENST00000345865 ATP5J2P56134 94 aa11.83□□□□□ -0.51
UPF3B-202ENST00000345865 PRELID3AQ96N28 172 aa11.83□□□□□ -0.51
UPF3B-202ENST00000345865 C11orf21Q9P2W6 132 aa11.83□□□□□ -0.51
UPF3B-202ENST00000345865 RPS20P60866 119 aaKnown RBP11.83□□□□□ -0.52
UPF3B-202ENST00000345865 UNQ9165/PRO28630Q6UXU0 137 aa11.83□□□□□ -0.52
UPF3B-202ENST00000345865 Q6ZQT7 251 aa11.83□□□□□ -0.52
UPF3B-202ENST00000345865 Q6ZS46 218 aa11.83□□□□□ -0.52
UPF3B-202ENST00000345865 STPG4Q8N801 248 aa11.83□□□□□ -0.52
UPF3B-202ENST00000345865 PMCHL2Q9BQD1 86 aa11.83□□□□□ -0.52
UPF3B-202ENST00000345865 MAP1LC3CQ9BXW4 147 aa11.83□□□□□ -0.52
UPF3B-202ENST00000345865 LAMTOR2Q9Y2Q5 125 aa11.83□□□□□ -0.52
UPF3B-202ENST00000345865 C20orf202A1L168 122 aa11.82□□□□□ -0.52
UPF3B-202ENST00000345865 PPIFP30405 207 aaKnown RBP11.82□□□□□ -0.52
UPF3B-202ENST00000345865 SRSF2Q01130 221 aaKnown RBP11.82□□□□□ -0.52
UPF3B-202ENST00000345865 FA2HQ7L5A8 372 aa11.82□□□□□ -0.52
UPF3B-202ENST00000345865 ORMDL3Q8N138 153 aa11.82□□□□□ -0.52
UPF3B-202ENST00000345865 ZNF747Q9BV97 191 aa11.82□□□□□ -0.52
UPF3B-202ENST00000345865 ACACBO00763 2458 aa11.82□□□□□ -0.52
UPF3B-202ENST00000345865 IGKV3D-20A0A0C4DH25 116 aa11.82□□□□□ -0.52
UPF3B-202ENST00000345865 FAM223BA6NKX1 122 aa11.82□□□□□ -0.52
UPF3B-202ENST00000345865 H3BUX3 64 aa11.82□□□□□ -0.52
UPF3B-202ENST00000345865 GAS8-AS1O95177 125 aa11.82□□□□□ -0.52
UPF3B-202ENST00000345865 LINC01559Q495D7 138 aa11.82□□□□□ -0.52
UPF3B-202ENST00000345865 CLEC2AQ6UVW9 174 aa11.82□□□□□ -0.52
UPF3B-202ENST00000345865 FAM223AQ8IWN6 122 aa11.82□□□□□ -0.52
UPF3B-202ENST00000345865 HSPB8Q9UJY1 196 aa11.82□□□□□ -0.52
UPF3B-202ENST00000345865 CSPG4Q6UVK1 2322 aa11.82□□□□□ -0.52
UPF3B-202ENST00000345865 SMAD7O15105 426 aaKnown RBP11.81□□□□□ -0.52
UPF3B-202ENST00000345865 NCR2O95944 276 aa11.81□□□□□ -0.52
UPF3B-202ENST00000345865 AVPP01185 164 aa11.81□□□□□ -0.52
UPF3B-202ENST00000345865 IGF1P05019 195 aa11.81□□□□□ -0.52
UPF3B-202ENST00000345865 ZNF25P17030 456 aaPredicted RBP11.81□□□□□ -0.52
UPF3B-202ENST00000345865 FXYD7P58549 80 aa11.81□□□□□ -0.52
UPF3B-202ENST00000345865 BLCAPP62952 87 aa11.81□□□□□ -0.52
UPF3B-202ENST00000345865 PET117Q6UWS5 81 aa11.81□□□□□ -0.52
UPF3B-202ENST00000345865 NRGNQ92686 78 aa11.81□□□□□ -0.52
UPF3B-202ENST00000345865 RNF185Q96GF1 192 aa11.81□□□□□ -0.52
UPF3B-202ENST00000345865 CNFNQ9BYD5 112 aa11.81□□□□□ -0.52
UPF3B-202ENST00000345865 MYO18BQ8IUG5 2567 aa11.81□□□□□ -0.52
UPF3B-202ENST00000345865 NPYP01303 97 aa11.81□□□□□ -0.52
UPF3B-202ENST00000345865 ARL3P36405 182 aa11.81□□□□□ -0.52
UPF3B-202ENST00000345865 GLMPQ8WWB7 406 aa11.81□□□□□ -0.52
UPF3B-202ENST00000345865 KLK15Q9H2R5 256 aa11.81□□□□□ -0.52
UPF3B-202ENST00000345865 FBN2P35556 2912 aa11.8□□□□□ -0.52
UPF3B-202ENST00000345865 A6NDX4 124 aa11.8□□□□□ -0.52
UPF3B-202ENST00000345865 NDUFS8O00217 210 aa11.8□□□□□ -0.52
UPF3B-202ENST00000345865 OR10AG1Q8NH19 301 aa11.8□□□□□ -0.52
UPF3B-202ENST00000345865 C20orf173Q96LM9 149 aa11.8□□□□□ -0.52
UPF3B-202ENST00000345865 MRPS16Q9Y3D3 137 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms