RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 CCL19Q99731 98 aa11.5□□□□□ -0.57
VIPAS39-202ENST00000343765 PMCHL2Q9BQD1 86 aa11.5□□□□□ -0.57
VIPAS39-202ENST00000343765 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.5□□□□□ -0.57
VIPAS39-202ENST00000343765 hDV102S1A0JD36 115 aa11.49□□□□□ -0.57
VIPAS39-202ENST00000343765 ZNF25P17030 456 aaPredicted RBP11.49□□□□□ -0.57
VIPAS39-202ENST00000343765 TWIST1Q15672 202 aa11.49□□□□□ -0.57
VIPAS39-202ENST00000343765 FAM106AQ4KMX7 169 aa11.49□□□□□ -0.57
VIPAS39-202ENST00000343765 FA2HQ7L5A8 372 aa11.49□□□□□ -0.57
VIPAS39-202ENST00000343765 AP5S1Q9NUS5 200 aa11.49□□□□□ -0.57
VIPAS39-202ENST00000343765 ABCA12Q86UK0 2595 aa11.49□□□□□ -0.57
VIPAS39-202ENST00000343765 IGHV1-69DA0A0B4J2H0 117 aa11.49□□□□□ -0.57
VIPAS39-202ENST00000343765 A0A1B0GW15 77 aa11.49□□□□□ -0.57
VIPAS39-202ENST00000343765 SMKR1H3BMG3 65 aa11.49□□□□□ -0.57
VIPAS39-202ENST00000343765 IGHV1-69P01742 117 aa11.49□□□□□ -0.57
VIPAS39-202ENST00000343765 IFI27P40305 119 aaPredicted RBP11.49□□□□□ -0.57
VIPAS39-202ENST00000343765 IL17RELQ6ZVW7 336 aa11.49□□□□□ -0.57
VIPAS39-202ENST00000343765 FER1L6-AS1Q8NA97 138 aa11.49□□□□□ -0.57
VIPAS39-202ENST00000343765 PIMREGQ9BSJ6 248 aa11.49□□□□□ -0.57
VIPAS39-202ENST00000343765 MOB4Q9Y3A3 225 aa11.49□□□□□ -0.57
VIPAS39-202ENST00000343765 FBN2P35556 2912 aa11.49□□□□□ -0.57
VIPAS39-202ENST00000343765 USP24Q9UPU5 2620 aa11.48□□□□□ -0.57
VIPAS39-202ENST00000343765 TRAV41A0A0B4J266 112 aa11.48□□□□□ -0.57
VIPAS39-202ENST00000343765 IGHV4-38-2P0DP08 117 aa11.48□□□□□ -0.57
VIPAS39-202ENST00000343765 PPIFP30405 207 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-202ENST00000343765 S100A7P31151 101 aa11.48□□□□□ -0.57
VIPAS39-202ENST00000343765 ATP5G2Q06055 141 aa11.48□□□□□ -0.57
VIPAS39-202ENST00000343765 PAX8Q06710 450 aa11.48□□□□□ -0.57
VIPAS39-202ENST00000343765 EPG5Q9HCE0 2579 aa11.48□□□□□ -0.57
VIPAS39-202ENST00000343765 BMI1P35226 326 aa11.48□□□□□ -0.57
VIPAS39-202ENST00000343765 FXYD7P58549 80 aa11.48□□□□□ -0.57
VIPAS39-202ENST00000343765 METTL26Q96S19 204 aa11.48□□□□□ -0.57
VIPAS39-202ENST00000343765 MAP1LC3CQ9BXW4 147 aa11.48□□□□□ -0.57
VIPAS39-202ENST00000343765 OR5AL1P0C617 328 aa11.47□□□□□ -0.57
VIPAS39-202ENST00000343765 LOXL1Q08397 574 aaPredicted RBP11.47□□□□□ -0.57
VIPAS39-202ENST00000343765 GATD1Q8NB37 220 aa11.47□□□□□ -0.57
VIPAS39-202ENST00000343765 PIFOQ8TCI5 191 aa11.47□□□□□ -0.57
VIPAS39-202ENST00000343765 DOPEY1Q5JWR5 2465 aa11.47□□□□□ -0.57
VIPAS39-202ENST00000343765 TRBV7-1A0A0A6YYK4 115 aa11.47□□□□□ -0.57
VIPAS39-202ENST00000343765 C20orf202A1L168 122 aa11.47□□□□□ -0.57
VIPAS39-202ENST00000343765 NCR2O95944 276 aa11.47□□□□□ -0.57
VIPAS39-202ENST00000343765 TRGV3P03979 118 aa11.47□□□□□ -0.57
VIPAS39-202ENST00000343765 TSPOP30536 169 aa11.47□□□□□ -0.57
VIPAS39-202ENST00000343765 FAM104BQ5XKR9 115 aa11.47□□□□□ -0.57
VIPAS39-202ENST00000343765 ZNF493Q6ZR52 646 aa11.47□□□□□ -0.57
VIPAS39-202ENST00000343765 MRPL52Q86TS9 123 aaKnown RBP11.47□□□□□ -0.57
VIPAS39-202ENST00000343765 PRELID3AQ96N28 172 aa11.47□□□□□ -0.57
VIPAS39-202ENST00000343765 MSRB1Q9NZV6 116 aa11.47□□□□□ -0.57
VIPAS39-202ENST00000343765 LAMTOR2Q9Y2Q5 125 aa11.46□□□□□ -0.57
VIPAS39-202ENST00000343765 HINT1P49773 126 aaPredicted RBP11.46□□□□□ -0.58
VIPAS39-202ENST00000343765 ATP5J2P56134 94 aa11.46□□□□□ -0.58
VIPAS39-202ENST00000343765 MRPL51Q4U2R6 128 aaKnown RBP11.46□□□□□ -0.58
VIPAS39-202ENST00000343765 NRGNQ92686 78 aa11.46□□□□□ -0.58
VIPAS39-202ENST00000343765 HSPB8Q9UJY1 196 aa11.46□□□□□ -0.58
VIPAS39-202ENST00000343765 IGHV4-30-2A0A087WSY4 118 aa11.45□□□□□ -0.58
VIPAS39-202ENST00000343765 A0A087X0K7 114 aa11.45□□□□□ -0.58
VIPAS39-202ENST00000343765 CRXO43186 299 aaPredicted RBP11.45□□□□□ -0.58
VIPAS39-202ENST00000343765 TRBV12-3P01733 135 aa11.45□□□□□ -0.58
VIPAS39-202ENST00000343765 COX8CQ7Z4L0 72 aa11.45□□□□□ -0.58
VIPAS39-202ENST00000343765 SIGLEC8Q9NYZ4 499 aa11.45□□□□□ -0.58
VIPAS39-202ENST00000343765 RAB9AP51151 201 aa11.45□□□□□ -0.58
VIPAS39-202ENST00000343765 C8orf86Q6ZUL3 223 aa11.45□□□□□ -0.58
VIPAS39-202ENST00000343765 ORMDL3Q8N138 153 aa11.45□□□□□ -0.58
VIPAS39-202ENST00000343765 STPG4Q8N801 248 aa11.45□□□□□ -0.58
VIPAS39-202ENST00000343765 FABP5P3A8MUU1 101 aa11.45□□□□□ -0.58
VIPAS39-202ENST00000343765 COL5A1-AS1Q5SY13 56 aa11.45□□□□□ -0.58
VIPAS39-202ENST00000343765 CLEC2AQ6UVW9 174 aa11.45□□□□□ -0.58
VIPAS39-202ENST00000343765 ZNF575Q86XF7 245 aa11.45□□□□□ -0.58
VIPAS39-202ENST00000343765 ARL6IP6Q8N6S5 226 aa11.45□□□□□ -0.58
VIPAS39-202ENST00000343765 C10orf105Q8TEF2 133 aa11.45□□□□□ -0.58
VIPAS39-202ENST00000343765 SLC50A1Q9BRV3 221 aa11.45□□□□□ -0.58
VIPAS39-202ENST00000343765 TMEM191AQ9H0A3 160 aa11.45□□□□□ -0.58
VIPAS39-202ENST00000343765 DOPEY2Q9Y3R5 2298 aa11.44□□□□□ -0.58
VIPAS39-202ENST00000343765 TRAV8-2A0A0B4J237 113 aa11.44□□□□□ -0.58
VIPAS39-202ENST00000343765 FBLL1A6NHQ2 334 aaKnown RBP11.44□□□□□ -0.58
VIPAS39-202ENST00000343765 IGHV3-11P01762 117 aa11.44□□□□□ -0.58
VIPAS39-202ENST00000343765 CKS2P33552 79 aa11.44□□□□□ -0.58
VIPAS39-202ENST00000343765 RPS20P60866 119 aaKnown RBP11.44□□□□□ -0.58
VIPAS39-202ENST00000343765 AGPAT4-IT1Q9H0P7 198 aa11.44□□□□□ -0.58
VIPAS39-202ENST00000343765 SELENOKQ9Y6D0 94 aa11.44□□□□□ -0.58
VIPAS39-202ENST00000343765 PTPN13Q12923 2485 aa11.44□□□□□ -0.58
VIPAS39-202ENST00000343765 H3BUX3 64 aa11.44□□□□□ -0.58
VIPAS39-202ENST00000343765 IGLC6P0CF74 106 aa11.44□□□□□ -0.58
VIPAS39-202ENST00000343765 KLK9Q2XQG4 91 aa11.44□□□□□ -0.58
VIPAS39-202ENST00000343765 LCNL1Q6ZST4 164 aa11.44□□□□□ -0.58
VIPAS39-202ENST00000343765 OR8A1Q8NGG7 326 aa11.44□□□□□ -0.58
VIPAS39-202ENST00000343765 OR10AG1Q8NH19 301 aa11.44□□□□□ -0.58
VIPAS39-202ENST00000343765 KLK9Q9UKQ9 250 aa11.44□□□□□ -0.58
VIPAS39-202ENST00000343765 ARL3P36405 182 aa11.43□□□□□ -0.58
VIPAS39-202ENST00000343765 NPYP01303 97 aa11.43□□□□□ -0.58
VIPAS39-202ENST00000343765 UNQ9165/PRO28630Q6UXU0 137 aa11.43□□□□□ -0.58
VIPAS39-202ENST00000343765 Q6ZQT7 251 aa11.43□□□□□ -0.58
VIPAS39-202ENST00000343765 J3KRW8 73 aa11.42□□□□□ -0.58
VIPAS39-202ENST00000343765 TMEM78Q5T7P6 136 aa11.42□□□□□ -0.58
VIPAS39-202ENST00000343765 C16orf92Q96LL3 132 aa11.42□□□□□ -0.58
VIPAS39-202ENST00000343765 TMEM208Q9BTX3 173 aa11.42□□□□□ -0.58
VIPAS39-202ENST00000343765 ZNF747Q9BV97 191 aa11.42□□□□□ -0.58
VIPAS39-202ENST00000343765 HSBP1L1C9JCN9 74 aa11.42□□□□□ -0.58
VIPAS39-202ENST00000343765 PET117Q6UWS5 81 aa11.42□□□□□ -0.58
VIPAS39-202ENST00000343765 C11orf21Q9P2W6 132 aa11.42□□□□□ -0.58
VIPAS39-202ENST00000343765 GAS8-AS1O95177 125 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms