RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 PRR25Q96S07 402 aa12.94□□□□□ -0.34
FRMD4A-202ENST00000342409 SMIM27A0A1W2PRY6 76 aa12.93□□□□□ -0.34
FRMD4A-202ENST00000342409 ZNF705GA8MUZ8 300 aaPredicted RBP12.93□□□□□ -0.34
FRMD4A-202ENST00000342409 HAX1O00165 279 aa12.93□□□□□ -0.34
FRMD4A-202ENST00000342409 PHOX2AO14813 284 aa12.93□□□□□ -0.34
FRMD4A-202ENST00000342409 TYMSP04818 313 aa12.93□□□□□ -0.34
FRMD4A-202ENST00000342409 DEFB1P60022 68 aa12.93□□□□□ -0.34
FRMD4A-202ENST00000342409 DLX4Q92988 240 aaPredicted RBP12.93□□□□□ -0.34
FRMD4A-202ENST00000342409 RNF114Q9Y508 228 aa12.93□□□□□ -0.34
FRMD4A-202ENST00000342409 NPIPB6E9PJ23 425 aa12.93□□□□□ -0.34
FRMD4A-202ENST00000342409 RPL11P62913 178 aaKnown RBP12.93□□□□□ -0.34
FRMD4A-202ENST00000342409 FHL3Q13643 280 aa12.93□□□□□ -0.34
FRMD4A-202ENST00000342409 ZFP82Q8N141 532 aa12.93□□□□□ -0.34
FRMD4A-202ENST00000342409 AGPAT4-IT1Q9H0P7 198 aa12.93□□□□□ -0.34
FRMD4A-202ENST00000342409 CLEC5AQ9NY25 188 aa12.93□□□□□ -0.34
FRMD4A-202ENST00000342409 NIPBLQ6KC79 2804 aaeCLIP12.93□□□□□ -0.34
FRMD4A-202ENST00000342409 AGRNO00468 2067 aa12.93□□□□□ -0.34
FRMD4A-202ENST00000342409 A0A1W2PRX2 142 aa12.92□□□□□ -0.34
FRMD4A-202ENST00000342409 FBLL1A6NHQ2 334 aaKnown RBP12.92□□□□□ -0.34
FRMD4A-202ENST00000342409 TCF21O43680 179 aa12.92□□□□□ -0.34
FRMD4A-202ENST00000342409 FRMD6-AS1P0C7T7 363 aa12.92□□□□□ -0.34
FRMD4A-202ENST00000342409 KRTAP10-3P60369 221 aa12.92□□□□□ -0.34
FRMD4A-202ENST00000342409 GBGT1Q8N5D6 347 aa12.92□□□□□ -0.34
FRMD4A-202ENST00000342409 DPF1Q92782 380 aa12.92□□□□□ -0.34
FRMD4A-202ENST00000342409 SRD5A3Q9H8P0 318 aa12.92□□□□□ -0.34
FRMD4A-202ENST00000342409 ADARB2-AS1A8MUL3 147 aa12.91□□□□□ -0.34
FRMD4A-202ENST00000342409 TCL1AP56279 114 aa12.91□□□□□ -0.34
FRMD4A-202ENST00000342409 C9orf47Q6ZRZ4 202 aa12.91□□□□□ -0.34
FRMD4A-202ENST00000342409 RPP21Q9H633 154 aaKnown RBP12.91□□□□□ -0.34
FRMD4A-202ENST00000342409 BIN3Q9NQY0 253 aa12.91□□□□□ -0.34
FRMD4A-202ENST00000342409 C1orf196B1AJZ1 125 aa12.91□□□□□ -0.34
FRMD4A-202ENST00000342409 ZNF705DP0CH99 300 aaPredicted RBP12.91□□□□□ -0.34
FRMD4A-202ENST00000342409 ZNF705BP0CI00 300 aaPredicted RBP12.91□□□□□ -0.34
FRMD4A-202ENST00000342409 BMI1P35226 326 aa12.91□□□□□ -0.34
FRMD4A-202ENST00000342409 ZNF80P51504 273 aaPredicted RBP12.91□□□□□ -0.34
FRMD4A-202ENST00000342409 ZNF738Q8NE65 137 aa12.91□□□□□ -0.34
FRMD4A-202ENST00000342409 MS4A6AQ9H2W1 248 aa12.91□□□□□ -0.34
FRMD4A-202ENST00000342409 TSSC4Q9Y5U2 329 aaPredicted RBP12.91□□□□□ -0.34
FRMD4A-202ENST00000342409 TRAV9-1A0A075B6T8 112 aa12.9□□□□□ -0.34
FRMD4A-202ENST00000342409 LOC105371267A0A1B0GV96 52 aa12.9□□□□□ -0.34
FRMD4A-202ENST00000342409 TRGC2P03986 189 aa12.9□□□□□ -0.34
FRMD4A-202ENST00000342409 CSN3P07498 182 aa12.9□□□□□ -0.34
FRMD4A-202ENST00000342409 OR9G4Q8NGQ1 327 aa12.9□□□□□ -0.34
FRMD4A-202ENST00000342409 P01737 135 aa12.89□□□□□ -0.35
FRMD4A-202ENST00000342409 SAPCD1Q5SSQ6 148 aa12.89□□□□□ -0.35
FRMD4A-202ENST00000342409 TENM1Q9UKZ4 2725 aa12.89□□□□□ -0.35
FRMD4A-202ENST00000342409 K7EQG2 157 aa12.88□□□□□ -0.35
FRMD4A-202ENST00000342409 CCL24O00175 119 aa12.88□□□□□ -0.35
FRMD4A-202ENST00000342409 RPL19P84098 196 aaKnown RBP12.88□□□□□ -0.35
FRMD4A-202ENST00000342409 CT83Q5H943 113 aa12.88□□□□□ -0.35
FRMD4A-202ENST00000342409 WFDC3Q8IUB2 231 aa12.88□□□□□ -0.35
FRMD4A-202ENST00000342409 TSKUQ8WUA8 353 aa12.88□□□□□ -0.35
FRMD4A-202ENST00000342409 PPP1R14DQ9NXH3 145 aa12.88□□□□□ -0.35
FRMD4A-202ENST00000342409 F6UB75 175 aa12.88□□□□□ -0.35
FRMD4A-202ENST00000342409 SH2D1AO60880 128 aa12.88□□□□□ -0.35
FRMD4A-202ENST00000342409 GTSF1Q8WW33 167 aa12.88□□□□□ -0.35
FRMD4A-202ENST00000342409 NEU1Q99519 415 aa12.88□□□□□ -0.35
FRMD4A-202ENST00000342409 OVOL1O14753 267 aa12.87□□□□□ -0.35
FRMD4A-202ENST00000342409 ZNF138P52744 262 aa12.87□□□□□ -0.35
FRMD4A-202ENST00000342409 RAB5BP61020 215 aa12.87□□□□□ -0.35
FRMD4A-202ENST00000342409 ZNF575Q86XF7 245 aa12.87□□□□□ -0.35
FRMD4A-202ENST00000342409 NUP35Q8NFH5 326 aa12.87□□□□□ -0.35
FRMD4A-202ENST00000342409 OR4B1Q8NGF8 309 aa12.87□□□□□ -0.35
FRMD4A-202ENST00000342409 FRZBQ92765 325 aa12.87□□□□□ -0.35
FRMD4A-202ENST00000342409 DAZAP1Q96EP5 407 aaKnown RBP12.87□□□□□ -0.35
FRMD4A-202ENST00000342409 BTF3L4Q96K17 158 aa12.87□□□□□ -0.35
FRMD4A-202ENST00000342409 TEP1Q99973 2627 aaKnown RBP12.86□□□□□ -0.35
FRMD4A-202ENST00000342409 IZUMO1RA6ND01 250 aa12.86□□□□□ -0.35
FRMD4A-202ENST00000342409 GZMBP10144 247 aa12.86□□□□□ -0.35
FRMD4A-202ENST00000342409 TFPI2P48307 235 aa12.86□□□□□ -0.35
FRMD4A-202ENST00000342409 OR2D3Q8NGH3 330 aa12.86□□□□□ -0.35
FRMD4A-202ENST00000342409 PEMTQ9UBM1 199 aa12.86□□□□□ -0.35
FRMD4A-202ENST00000342409 A8MWL6 223 aa12.85□□□□□ -0.35
FRMD4A-202ENST00000342409 SPINK4O60575 86 aa12.85□□□□□ -0.35
FRMD4A-202ENST00000342409 CT45A10P0DMU9 189 aa12.85□□□□□ -0.35
FRMD4A-202ENST00000342409 ACTL10Q5JWF8 245 aa12.85□□□□□ -0.35
FRMD4A-202ENST00000342409 FAM162BQ5T6X4 162 aa12.85□□□□□ -0.35
FRMD4A-202ENST00000342409 TMEM78Q5T7P6 136 aa12.85□□□□□ -0.35
FRMD4A-202ENST00000342409 OR8A1Q8NGG7 326 aa12.85□□□□□ -0.35
FRMD4A-202ENST00000342409 JMJD1CQ15652 2540 aa12.85□□□□□ -0.35
FRMD4A-202ENST00000342409 HIGD1CA8MV81 97 aa12.85□□□□□ -0.35
FRMD4A-202ENST00000342409 SMUG1Q53HV7 270 aa12.85□□□□□ -0.35
FRMD4A-202ENST00000342409 PRR9Q5T870 116 aa12.85□□□□□ -0.35
FRMD4A-202ENST00000342409 FAM19A4Q96LR4 140 aa12.85□□□□□ -0.35
FRMD4A-202ENST00000342409 M0QZ24 198 aa12.84□□□□□ -0.35
FRMD4A-202ENST00000342409 ZNF688P0C7X2 276 aa12.84□□□□□ -0.35
FRMD4A-202ENST00000342409 ID1P41134 155 aa12.84□□□□□ -0.35
FRMD4A-202ENST00000342409 GDF5OSQ5U4N7 250 aa12.84□□□□□ -0.35
FRMD4A-202ENST00000342409 SAMD13Q5VXD3 122 aa12.84□□□□□ -0.35
FRMD4A-202ENST00000342409 NDFIP1Q9BT67 221 aa12.84□□□□□ -0.35
FRMD4A-202ENST00000342409 NAT8BQ9UHF3 227 aa12.84□□□□□ -0.35
FRMD4A-202ENST00000342409 HIST1H2BKO60814 126 aa12.83□□□□□ -0.36
FRMD4A-202ENST00000342409 HIST1H2BJP06899 126 aa12.83□□□□□ -0.36
FRMD4A-202ENST00000342409 HIST1H2BOP23527 126 aa12.83□□□□□ -0.36
FRMD4A-202ENST00000342409 HIST1H2BBP33778 126 aa12.83□□□□□ -0.36
FRMD4A-202ENST00000342409 HIST1H2BDP58876 126 aa12.83□□□□□ -0.36
FRMD4A-202ENST00000342409 HIST1H2BCP62807 126 aa12.83□□□□□ -0.36
FRMD4A-202ENST00000342409 HIST2H2BEQ16778 126 aa12.83□□□□□ -0.36
FRMD4A-202ENST00000342409 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.83□□□□□ -0.36
FRMD4A-202ENST00000342409 MRPL54Q6P161 138 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms