RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 ASH1LQ9NR48 2969 aaKnown RBP11.56□□□□□ -0.56
PBX3-201ENST00000342287 SMIM27A0A1W2PRY6 76 aa11.56□□□□□ -0.56
PBX3-201ENST00000342287 CXorf1O96002 111 aa11.56□□□□□ -0.56
PBX3-201ENST00000342287 EBI3Q14213 229 aa11.56□□□□□ -0.56
PBX3-201ENST00000342287 AJUBAQ96IF1 538 aa11.56□□□□□ -0.56
PBX3-201ENST00000342287 RAX2Q96IS3 184 aa11.56□□□□□ -0.56
PBX3-201ENST00000342287 CRYBG3Q68DQ2 2970 aa11.56□□□□□ -0.56
PBX3-201ENST00000342287 B4DSR2 109 aa11.56□□□□□ -0.56
PBX3-201ENST00000342287 K7ERJ3 54 aa11.56□□□□□ -0.56
PBX3-201ENST00000342287 NDUFA3O95167 84 aa11.56□□□□□ -0.56
PBX3-201ENST00000342287 FGF6P10767 208 aa11.56□□□□□ -0.56
PBX3-201ENST00000342287 NHLRC2Q8NBF2 726 aa11.56□□□□□ -0.56
PBX3-201ENST00000342287 F11RQ9Y624 299 aaKnown RBP11.56□□□□□ -0.56
PBX3-201ENST00000342287 LY96Q9Y6Y9 160 aa11.56□□□□□ -0.56
PBX3-201ENST00000342287 CDIP1Q9H305 208 aa11.55□□□□□ -0.56
PBX3-201ENST00000342287 FAM106CPP0CH98 169 aa11.55□□□□□ -0.56
PBX3-201ENST00000342287 ZNF138P52744 262 aa11.55□□□□□ -0.56
PBX3-201ENST00000342287 XGP55808 180 aa11.55□□□□□ -0.56
PBX3-201ENST00000342287 TEPPQ6URK8 271 aa11.55□□□□□ -0.56
PBX3-201ENST00000342287 PIP4P2Q8N4L2 257 aa11.55□□□□□ -0.56
PBX3-201ENST00000342287 LSM4Q9Y4Z0 139 aaKnown RBP11.55□□□□□ -0.56
PBX3-201ENST00000342287 GCSHP23434 173 aa11.54□□□□□ -0.56
PBX3-201ENST00000342287 PPIFP30405 207 aaKnown RBP11.54□□□□□ -0.56
PBX3-201ENST00000342287 DEFB113Q30KQ7 82 aa11.54□□□□□ -0.56
PBX3-201ENST00000342287 TM2D2Q9BX73 214 aa11.54□□□□□ -0.56
PBX3-201ENST00000342287 PPDPFQ9H3Y8 114 aa11.54□□□□□ -0.56
PBX3-201ENST00000342287 WNK2Q9Y3S1 2297 aa11.54□□□□□ -0.56
PBX3-201ENST00000342287 AMTNQ6UX39 209 aa11.54□□□□□ -0.56
PBX3-201ENST00000342287 LRRC75A-AS1Q8N1F1 130 aa11.54□□□□□ -0.56
PBX3-201ENST00000342287 Q8N6K4 173 aa11.54□□□□□ -0.56
PBX3-201ENST00000342287 SRSF12Q8WXF0 261 aaKnown RBP11.54□□□□□ -0.56
PBX3-201ENST00000342287 C1orf159Q96HA4 380 aa11.54□□□□□ -0.56
PBX3-201ENST00000342287 CHEK1O14757 476 aa11.53□□□□□ -0.56
PBX3-201ENST00000342287 GCHFRP30047 84 aa11.53□□□□□ -0.56
PBX3-201ENST00000342287 OPRK1P41145 380 aa11.53□□□□□ -0.56
PBX3-201ENST00000342287 TAS2R45P59539 299 aa11.53□□□□□ -0.56
PBX3-201ENST00000342287 CD69Q07108 199 aa11.53□□□□□ -0.56
PBX3-201ENST00000342287 Q6ZUT4 128 aa11.53□□□□□ -0.56
PBX3-201ENST00000342287 PSMG3-AS1Q96PY0 264 aa11.53□□□□□ -0.56
PBX3-201ENST00000342287 MGST2Q99735 147 aa11.53□□□□□ -0.56
PBX3-201ENST00000342287 USP9YO00507 2555 aaPredicted RBP11.53□□□□□ -0.56
PBX3-201ENST00000342287 IGHV1-69DA0A0B4J2H0 117 aa11.53□□□□□ -0.56
PBX3-201ENST00000342287 NCBP2LA6PVI3 153 aaKnown RBP11.53□□□□□ -0.56
PBX3-201ENST00000342287 IGHV1-69P01742 117 aa11.53□□□□□ -0.56
PBX3-201ENST00000342287 C7orf69Q9H7B7 122 aa11.53□□□□□ -0.56
PBX3-201ENST00000342287 ZNF355PQ9NSJ1 428 aa11.53□□□□□ -0.56
PBX3-201ENST00000342287 VPREB3Q9UKI3 123 aa11.53□□□□□ -0.56
PBX3-201ENST00000342287 A0A1B0GWB2 263 aa11.52□□□□□ -0.56
PBX3-201ENST00000342287 TEX22C9J3V5 150 aa11.52□□□□□ -0.56
PBX3-201ENST00000342287 FBN2P35556 2912 aa11.52□□□□□ -0.56
PBX3-201ENST00000342287 APOMO95445 188 aa11.52□□□□□ -0.57
PBX3-201ENST00000342287 AREGP15514 252 aa11.52□□□□□ -0.57
PBX3-201ENST00000342287 FAM162BQ5T6X4 162 aa11.52□□□□□ -0.57
PBX3-201ENST00000342287 MIC13Q5XKP0 118 aa11.52□□□□□ -0.57
PBX3-201ENST00000342287 GTSF1Q8WW33 167 aa11.52□□□□□ -0.57
PBX3-201ENST00000342287 A0A096LNT2 108 aa11.51□□□□□ -0.57
PBX3-201ENST00000342287 MLANAQ16655 118 aa11.51□□□□□ -0.57
PBX3-201ENST00000342287 LINC01545Q5VT33 79 aa11.51□□□□□ -0.57
PBX3-201ENST00000342287 LINC01356Q8N9X3 169 aa11.51□□□□□ -0.57
PBX3-201ENST00000342287 NUP35Q8NFH5 326 aa11.51□□□□□ -0.57
PBX3-201ENST00000342287 C11orf52Q96A22 123 aa11.51□□□□□ -0.57
PBX3-201ENST00000342287 A4D1N5 150 aa11.51□□□□□ -0.57
PBX3-201ENST00000342287 PRSS29PA6NIE9 313 aa11.51□□□□□ -0.57
PBX3-201ENST00000342287 CCDC179H3BU77 68 aa11.51□□□□□ -0.57
PBX3-201ENST00000342287 SMAD7O15105 426 aaKnown RBP11.51□□□□□ -0.57
PBX3-201ENST00000342287 APELAP0DMC3 54 aa11.51□□□□□ -0.57
PBX3-201ENST00000342287 GAGE13Q4V321 117 aa11.51□□□□□ -0.57
PBX3-201ENST00000342287 PVRIGQ6DKI7 326 aa11.51□□□□□ -0.57
PBX3-201ENST00000342287 SSMEM1Q8WWF3 244 aa11.51□□□□□ -0.57
PBX3-201ENST00000342287 IGHV3OR16-10A0A075B7F0 116 aa11.5□□□□□ -0.57
PBX3-201ENST00000342287 TRAV40A0A0B4J280 105 aa11.5□□□□□ -0.57
PBX3-201ENST00000342287 K7EMI3 77 aa11.5□□□□□ -0.57
PBX3-201ENST00000342287 NCR2O95944 276 aa11.5□□□□□ -0.57
PBX3-201ENST00000342287 CHCHD1Q96BP2 118 aaKnown RBP11.5□□□□□ -0.57
PBX3-201ENST00000342287 FXYD2P54710 66 aa11.5□□□□□ -0.57
PBX3-201ENST00000342287 LOXL1Q08397 574 aaPredicted RBP11.5□□□□□ -0.57
PBX3-201ENST00000342287 RUSC1-AS1Q66K80 236 aa11.5□□□□□ -0.57
PBX3-201ENST00000342287 OR4X2Q8NGF9 303 aa11.5□□□□□ -0.57
PBX3-201ENST00000342287 WIPF2Q8TF74 440 aaPredicted RBP11.5□□□□□ -0.57
PBX3-201ENST00000342287 GLMPQ8WWB7 406 aa11.5□□□□□ -0.57
PBX3-201ENST00000342287 ABCA2Q9BZC7 2435 aa11.5□□□□□ -0.57
PBX3-201ENST00000342287 GAGE12JA6NER3 117 aa11.5□□□□□ -0.57
PBX3-201ENST00000342287 OR2J3O76001 311 aa11.5□□□□□ -0.57
PBX3-201ENST00000342287 GAGE7O76087 117 aa11.5□□□□□ -0.57
PBX3-201ENST00000342287 CSN3P07498 182 aa11.5□□□□□ -0.57
PBX3-201ENST00000342287 OR5AL1P0C617 328 aa11.5□□□□□ -0.57
PBX3-201ENST00000342287 NHLRC4P0CG21 123 aaPredicted RBP11.5□□□□□ -0.57
PBX3-201ENST00000342287 GAGE12FP0CL80 117 aa11.5□□□□□ -0.57
PBX3-201ENST00000342287 GAGE12GP0CL81 117 aa11.5□□□□□ -0.57
PBX3-201ENST00000342287 GAGE12IP0CL82 117 aa11.5□□□□□ -0.57
PBX3-201ENST00000342287 NMUP48645 174 aa11.5□□□□□ -0.57
PBX3-201ENST00000342287 GAGE4Q13068 117 aa11.5□□□□□ -0.57
PBX3-201ENST00000342287 OR9G4Q8NGQ1 327 aa11.5□□□□□ -0.57
PBX3-201ENST00000342287 ZFAND6Q6FIF0 208 aa11.49□□□□□ -0.57
PBX3-201ENST00000342287 CELSR2Q9HCU4 2923 aa11.49□□□□□ -0.57
PBX3-201ENST00000342287 A0A087WX48 190 aa11.49□□□□□ -0.57
PBX3-201ENST00000342287 RASL11AQ6T310 242 aa11.49□□□□□ -0.57
PBX3-201ENST00000342287 BRD3OSQ6XYD6 125 aa11.49□□□□□ -0.57
PBX3-201ENST00000342287 BCL6BQ8N143 479 aaPredicted RBP11.49□□□□□ -0.57
PBX3-201ENST00000342287 NHP2Q9NX24 153 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms