RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 DSCAML1Q8TD84 2053 aa14.5□□□□□ -0.09
SMPD1-201ENST00000342245 NDUFA3O95167 84 aa14.5□□□□□ -0.09
SMPD1-201ENST00000342245 IGLV2-23P01705 113 aa14.5□□□□□ -0.09
SMPD1-201ENST00000342245 C1orf162Q8NEQ5 155 aaPredicted RBP14.5□□□□□ -0.09
SMPD1-201ENST00000342245 H3BRN7 92 aa14.5□□□□□ -0.09
SMPD1-201ENST00000342245 TCL1BO95988 128 aa14.5□□□□□ -0.09
SMPD1-201ENST00000342245 PRTN3P24158 256 aa14.5□□□□□ -0.09
SMPD1-201ENST00000342245 CD40P25942 277 aa14.5□□□□□ -0.09
SMPD1-201ENST00000342245 Q6ZT83 130 aa14.5□□□□□ -0.09
SMPD1-201ENST00000342245 VPREB3Q9UKI3 123 aa14.5□□□□□ -0.09
SMPD1-201ENST00000342245 RUSC1-AS1Q66K80 236 aa14.49□□□□□ -0.09
SMPD1-201ENST00000342245 OR10J6PQ8NGY7 276 aa14.49□□□□□ -0.09
SMPD1-201ENST00000342245 RAXQ9Y2V3 346 aa14.49□□□□□ -0.09
SMPD1-201ENST00000342245 HCP5Q6MZN7 132 aa14.49□□□□□ -0.09
SMPD1-201ENST00000342245 SRSF8Q9BRL6 282 aaKnown RBP14.49□□□□□ -0.09
SMPD1-201ENST00000342245 SRSF9Q13242 221 aaKnown RBP eCLIP14.48□□□□□ -0.09
SMPD1-201ENST00000342245 TRAV8-2A0A0B4J237 113 aa14.48□□□□□ -0.09
SMPD1-201ENST00000342245 H3BVH4 76 aa14.48□□□□□ -0.09
SMPD1-201ENST00000342245 CECR9P0C854 216 aa14.48□□□□□ -0.09
SMPD1-201ENST00000342245 ANXA2RQ3ZCQ2 193 aa14.48□□□□□ -0.09
SMPD1-201ENST00000342245 PCNX2A6NKB5 2137 aa14.47□□□□□ -0.09
SMPD1-201ENST00000342245 TRAV4A0A0B4J268 109 aa14.47□□□□□ -0.09
SMPD1-201ENST00000342245 CD7P09564 240 aa14.47□□□□□ -0.09
SMPD1-201ENST00000342245 EGR2P11161 476 aaPredicted RBP14.47□□□□□ -0.09
SMPD1-201ENST00000342245 FAM159AQ6UWV7 190 aa14.47□□□□□ -0.09
SMPD1-201ENST00000342245 RAB1BQ9H0U4 201 aa14.47□□□□□ -0.09
SMPD1-201ENST00000342245 MDFICQ9P1T7 246 aa14.47□□□□□ -0.09
SMPD1-201ENST00000342245 TRIOBPQ9H2D6 2365 aa14.47□□□□□ -0.09
SMPD1-201ENST00000342245 NTN3O00634 580 aaPredicted RBP14.47□□□□□ -0.09
SMPD1-201ENST00000342245 RPL27AP46776 148 aaKnown RBP14.47□□□□□ -0.09
SMPD1-201ENST00000342245 MRPL23Q16540 153 aaKnown RBP14.47□□□□□ -0.09
SMPD1-201ENST00000342245 NDUFA11Q86Y39 141 aa14.47□□□□□ -0.09
SMPD1-201ENST00000342245 ASCL2Q99929 193 aa14.47□□□□□ -0.09
SMPD1-201ENST00000342245 HES7Q9BYE0 225 aa14.47□□□□□ -0.09
SMPD1-201ENST00000342245 FREM2Q5SZK8 3169 aa14.46□□□□□ -0.09
SMPD1-201ENST00000342245 LINC01548A6NM66 108 aa14.46□□□□□ -0.09
SMPD1-201ENST00000342245 TNRC18O15417 2968 aaPredicted RBP14.46□□□□□ -0.1
SMPD1-201ENST00000342245 SCGB1D4Q6XE38 83 aa14.46□□□□□ -0.1
SMPD1-201ENST00000342245 C17orf77Q96MU5 243 aa14.46□□□□□ -0.1
SMPD1-201ENST00000342245 GAFA1Q96PS6 74 aa14.46□□□□□ -0.1
SMPD1-201ENST00000342245 PRR25Q96S07 402 aa14.46□□□□□ -0.1
SMPD1-201ENST00000342245 PROCRQ9UNN8 238 aa14.46□□□□□ -0.1
SMPD1-201ENST00000342245 IGLV1-44P01699 117 aa14.45□□□□□ -0.1
SMPD1-201ENST00000342245 MEIG1Q5JSS6 88 aa14.45□□□□□ -0.1
SMPD1-201ENST00000342245 C8orf31Q8N9H6 132 aa14.45□□□□□ -0.1
SMPD1-201ENST00000342245 RNF7Q9UBF6 113 aa14.45□□□□□ -0.1
SMPD1-201ENST00000342245 DKK4Q9UBT3 224 aa14.45□□□□□ -0.1
SMPD1-201ENST00000342245 SLC25A20O43772 301 aa14.44□□□□□ -0.1
SMPD1-201ENST00000342245 WT1P19544 449 aaPredicted RBP14.44□□□□□ -0.1
SMPD1-201ENST00000342245 ZNRD1Q9P1U0 126 aa14.44□□□□□ -0.1
SMPD1-201ENST00000342245 ZNF815PA8K554 130 aa14.44□□□□□ -0.1
SMPD1-201ENST00000342245 MRPS12O15235 138 aaKnown RBP14.44□□□□□ -0.1
SMPD1-201ENST00000342245 GATA4P43694 442 aa14.44□□□□□ -0.1
SMPD1-201ENST00000342245 SPRNQ5BIV9 151 aa14.44□□□□□ -0.1
SMPD1-201ENST00000342245 LINC01600Q96MT4 127 aa14.44□□□□□ -0.1
SMPD1-201ENST00000342245 DOCK7Q96N67 2140 aa14.44□□□□□ -0.1
SMPD1-201ENST00000342245 SLC25A16P16260 332 aa14.43□□□□□ -0.1
SMPD1-201ENST00000342245 ID1P41134 155 aa14.43□□□□□ -0.1
SMPD1-201ENST00000342245 C10orf126Q8N4M7 172 aa14.43□□□□□ -0.1
SMPD1-201ENST00000342245 LINC00311Q8N616 119 aa14.43□□□□□ -0.1
SMPD1-201ENST00000342245 PRO3102Q9H379 93 aa14.43□□□□□ -0.1
SMPD1-201ENST00000342245 M0R3E3 92 aa14.42□□□□□ -0.1
SMPD1-201ENST00000342245 DTX2Q86UW9 622 aa14.42□□□□□ -0.1
SMPD1-201ENST00000342245 RASL10AQ92737 203 aa14.42□□□□□ -0.1
SMPD1-201ENST00000342245 SPXQ9BT56 116 aa14.42□□□□□ -0.1
SMPD1-201ENST00000342245 DOCK10Q96BY6 2186 aa14.42□□□□□ -0.1
SMPD1-201ENST00000342245 HLA-DMBP28068 263 aa14.42□□□□□ -0.1
SMPD1-201ENST00000342245 CRLF1O75462 422 aa14.41□□□□□ -0.1
SMPD1-201ENST00000342245 MRGPRG-AS1Q2M3A8 158 aa14.41□□□□□ -0.1
SMPD1-201ENST00000342245 PRADC1Q9BSG0 188 aa14.41□□□□□ -0.1
SMPD1-201ENST00000342245 IGHV3-21A0A0B4J1V1 117 aa14.41□□□□□ -0.1
SMPD1-201ENST00000342245 MSRB1Q9NZV6 116 aa14.41□□□□□ -0.1
SMPD1-201ENST00000342245 TRGV5A0A0B4J1U4 118 aa14.4□□□□□ -0.1
SMPD1-201ENST00000342245 GAS8-AS1O95177 125 aa14.4□□□□□ -0.1
SMPD1-201ENST00000342245 IL17RELQ6ZVW7 336 aa14.4□□□□□ -0.1
SMPD1-201ENST00000342245 NRGNQ92686 78 aa14.4□□□□□ -0.1
SMPD1-201ENST00000342245 ORMDL2Q53FV1 153 aa14.4□□□□□ -0.1
SMPD1-201ENST00000342245 C5orf47Q569G3 176 aa14.4□□□□□ -0.1
SMPD1-201ENST00000342245 SPANXDQ9BXN6 97 aa14.4□□□□□ -0.1
SMPD1-201ENST00000342245 RPL13AP40429 203 aaKnown RBP14.39□□□□□ -0.11
SMPD1-201ENST00000342245 DUX4L9Q6RFH8 374 aaPredicted RBP14.39□□□□□ -0.11
SMPD1-201ENST00000342245 SFTA2Q6UW10 78 aa14.39□□□□□ -0.11
SMPD1-201ENST00000342245 C6orf15Q6UXA7 325 aaPredicted RBP14.39□□□□□ -0.11
SMPD1-201ENST00000342245 NEXN-AS1Q8NBZ9 246 aa14.39□□□□□ -0.11
SMPD1-201ENST00000342245 CCL13Q99616 98 aa14.39□□□□□ -0.11
SMPD1-201ENST00000342245 TRAV8-4A0A0B4J246 113 aa14.39□□□□□ -0.11
SMPD1-201ENST00000342245 IGHV1-18A0A0C4DH31 117 aa14.39□□□□□ -0.11
SMPD1-201ENST00000342245 I3L2K1 104 aa14.39□□□□□ -0.11
SMPD1-201ENST00000342245 IGKV1-17P01599 117 aa14.39□□□□□ -0.11
SMPD1-201ENST00000342245 ORM1P02763 201 aa14.39□□□□□ -0.11
SMPD1-201ENST00000342245 LY6DQ14210 128 aa14.39□□□□□ -0.11
SMPD1-201ENST00000342245 LPAL2Q16609 132 aa14.39□□□□□ -0.11
SMPD1-201ENST00000342245 SPRY4Q9C004 299 aa14.39□□□□□ -0.11
SMPD1-201ENST00000342245 TPSG1Q9NRR2 321 aa14.39□□□□□ -0.11
SMPD1-201ENST00000342245 ONECUT1Q9UBC0 465 aa14.39□□□□□ -0.11
SMPD1-201ENST00000342245 PRO1854Q9UHT4 67 aa14.39□□□□□ -0.11
SMPD1-201ENST00000342245 COX6B1P14854 86 aa14.38□□□□□ -0.11
SMPD1-201ENST00000342245 NRACQ8N912 160 aa14.38□□□□□ -0.11
SMPD1-201ENST00000342245 RNF125Q96EQ8 232 aa14.38□□□□□ -0.11
SMPD1-201ENST00000342245 PPDPFQ9H3Y8 114 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms