RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 K7EMI3 77 aa11.28□□□□□ -0.6
CPSF7-201ENST00000340437 GAGE10A6NGK3 116 aa11.28□□□□□ -0.6
CPSF7-201ENST00000340437 LINC01545Q5VT33 79 aa11.28□□□□□ -0.6
CPSF7-201ENST00000340437 PVRIGQ6DKI7 326 aa11.28□□□□□ -0.6
CPSF7-201ENST00000340437 PCP2Q8IVA1 136 aa11.28□□□□□ -0.6
CPSF7-201ENST00000340437 DEFB125Q8N687 156 aa11.28□□□□□ -0.6
CPSF7-201ENST00000340437 ARPC1AQ92747 370 aa11.28□□□□□ -0.6
CPSF7-201ENST00000340437 TNFRSF14Q92956 283 aa11.28□□□□□ -0.6
CPSF7-201ENST00000340437 DKK2Q9UBU2 259 aa11.28□□□□□ -0.6
CPSF7-201ENST00000340437 SPRY2O43597 315 aa11.27□□□□□ -0.6
CPSF7-201ENST00000340437 FER1L6-AS1Q8NA97 138 aa11.27□□□□□ -0.6
CPSF7-201ENST00000340437 CST9LQ9H4G1 147 aa11.27□□□□□ -0.6
CPSF7-201ENST00000340437 C5orf64Q2M2E5 130 aa11.27□□□□□ -0.61
CPSF7-201ENST00000340437 FAM104BQ5XKR9 115 aa11.27□□□□□ -0.61
CPSF7-201ENST00000340437 COX8AP10176 69 aa11.27□□□□□ -0.61
CPSF7-201ENST00000340437 DYNAPQ8N1N2 210 aa11.26□□□□□ -0.61
CPSF7-201ENST00000340437 UFC1Q9Y3C8 167 aa11.26□□□□□ -0.61
CPSF7-201ENST00000340437 NACAE9PAV3 2078 aa11.26□□□□□ -0.61
CPSF7-201ENST00000340437 BSNQ9UPA5 3926 aa11.26□□□□□ -0.61
CPSF7-201ENST00000340437 GAGE12BA1L429 117 aa11.26□□□□□ -0.61
CPSF7-201ENST00000340437 DEFB104AQ8WTQ1 72 aa11.26□□□□□ -0.61
CPSF7-201ENST00000340437 IFI27L1Q96BM0 104 aa11.26□□□□□ -0.61
CPSF7-201ENST00000340437 TIMD4Q96H15 378 aa11.26□□□□□ -0.61
CPSF7-201ENST00000340437 FANCD2OSQ96PS1 177 aa11.26□□□□□ -0.61
CPSF7-201ENST00000340437 MS4A6AQ9H2W1 248 aa11.26□□□□□ -0.61
CPSF7-201ENST00000340437 CEACAM3P40198 252 aa11.25□□□□□ -0.61
CPSF7-201ENST00000340437 FBLL1A6NHQ2 334 aaKnown RBP11.25□□□□□ -0.61
CPSF7-201ENST00000340437 K7EP13 123 aa11.25□□□□□ -0.61
CPSF7-201ENST00000340437 PRR25Q96S07 402 aa11.25□□□□□ -0.61
CPSF7-201ENST00000340437 PRAC2D3DTV9 90 aa11.25□□□□□ -0.61
CPSF7-201ENST00000340437 C2orf91Q6ZV80 131 aa11.25□□□□□ -0.61
CPSF7-201ENST00000340437 A0A096LNJ9 63 aa11.24□□□□□ -0.61
CPSF7-201ENST00000340437 CDSNQ15517 529 aa11.24□□□□□ -0.61
CPSF7-201ENST00000340437 ACANP16112 2415 aa11.24□□□□□ -0.61
CPSF7-201ENST00000340437 HBDP02042 147 aa11.24□□□□□ -0.61
CPSF7-201ENST00000340437 GCSHP23434 173 aa11.24□□□□□ -0.61
CPSF7-201ENST00000340437 LEPP41159 167 aa11.24□□□□□ -0.61
CPSF7-201ENST00000340437 PEF1Q9UBV8 284 aaKnown RBP11.24□□□□□ -0.61
CPSF7-201ENST00000340437 A1L4Q6 167 aa11.24□□□□□ -0.61
CPSF7-201ENST00000340437 CD5LO43866 347 aa11.24□□□□□ -0.61
CPSF7-201ENST00000340437 RPL7P18124 248 aaKnown RBP11.24□□□□□ -0.61
CPSF7-201ENST00000340437 RIPPLY3P57055 190 aa11.24□□□□□ -0.61
CPSF7-201ENST00000340437 SAP30O75446 220 aa11.23□□□□□ -0.61
CPSF7-201ENST00000340437 CLEC3BP05452 202 aa11.23□□□□□ -0.61
CPSF7-201ENST00000340437 OCIAD2Q56VL3 154 aa11.23□□□□□ -0.61
CPSF7-201ENST00000340437 RAB1BQ9H0U4 201 aa11.23□□□□□ -0.61
CPSF7-201ENST00000340437 ZNF462Q96JM2 2506 aa11.23□□□□□ -0.61
CPSF7-201ENST00000340437 TRAV26-2A0A0B4J265 109 aa11.23□□□□□ -0.61
CPSF7-201ENST00000340437 KLK15Q9H2R5 256 aa11.23□□□□□ -0.61
CPSF7-201ENST00000340437 FCER1GP30273 86 aa11.22□□□□□ -0.61
CPSF7-201ENST00000340437 CLEC19AQ6UXS0 136 aa11.22□□□□□ -0.61
CPSF7-201ENST00000340437 JKAMPQ9P055 326 aa11.22□□□□□ -0.61
CPSF7-201ENST00000340437 LY6LH3BQJ8 138 aa11.22□□□□□ -0.61
CPSF7-201ENST00000340437 Q6ZQT7 251 aa11.22□□□□□ -0.61
CPSF7-201ENST00000340437 VMO1Q7Z5L0 202 aa11.22□□□□□ -0.61
CPSF7-201ENST00000340437 WI2-2373I1.2A0A1W2PRP0 233 aa11.22□□□□□ -0.61
CPSF7-201ENST00000340437 OVOL3O00110 214 aa11.22□□□□□ -0.61
CPSF7-201ENST00000340437 KIR3DS1Q14943 382 aa11.22□□□□□ -0.61
CPSF7-201ENST00000340437 C15orf32Q32M92 178 aa11.22□□□□□ -0.61
CPSF7-201ENST00000340437 SAPCD1Q5SSQ6 148 aa11.22□□□□□ -0.61
CPSF7-201ENST00000340437 IL17RELQ6ZVW7 336 aa11.22□□□□□ -0.61
CPSF7-201ENST00000340437 S100A7AQ86SG5 101 aa11.22□□□□□ -0.61
CPSF7-201ENST00000340437 GTSCR1Q86UQ5 136 aa11.22□□□□□ -0.61
CPSF7-201ENST00000340437 G3V318 75 aa11.21□□□□□ -0.61
CPSF7-201ENST00000340437 MRPS12O15235 138 aaKnown RBP11.21□□□□□ -0.61
CPSF7-201ENST00000340437 LYPD1Q8N2G4 141 aa11.21□□□□□ -0.61
CPSF7-201ENST00000340437 PIP4P2Q8N4L2 257 aa11.21□□□□□ -0.61
CPSF7-201ENST00000340437 FOXC2Q99958 501 aa11.21□□□□□ -0.61
CPSF7-201ENST00000340437 TMEM160Q9NX00 188 aa11.21□□□□□ -0.61
CPSF7-201ENST00000340437 Q6AWC8 147 aa11.21□□□□□ -0.61
CPSF7-201ENST00000340437 CTSGP08311 255 aa11.21□□□□□ -0.62
CPSF7-201ENST00000340437 HOXB4P17483 251 aaPredicted RBP11.21□□□□□ -0.62
CPSF7-201ENST00000340437 MAP1LC3AQ9H492 121 aa11.21□□□□□ -0.62
CPSF7-201ENST00000340437 JMJD1CQ15652 2540 aa11.2□□□□□ -0.62
CPSF7-201ENST00000340437 IGLV11-55A0A075B6I3 123 aa11.2□□□□□ -0.62
CPSF7-201ENST00000340437 BMI1P35226 326 aa11.2□□□□□ -0.62
CPSF7-201ENST00000340437 CFHR4Q92496 578 aa11.2□□□□□ -0.62
CPSF7-201ENST00000340437 SMAD5-AS1Q9Y6J3 95 aa11.2□□□□□ -0.62
CPSF7-201ENST00000340437 ZNF562Q6V9R5 426 aa11.2□□□□□ -0.62
CPSF7-201ENST00000340437 MEGF9Q9H1U4 602 aa11.2□□□□□ -0.62
CPSF7-201ENST00000340437 HIF1ANQ9NWT6 349 aa11.2□□□□□ -0.62
CPSF7-201ENST00000340437 CUBNO60494 3623 aa11.2□□□□□ -0.62
CPSF7-201ENST00000340437 A0A1B0GW15 77 aa11.2□□□□□ -0.62
CPSF7-201ENST00000340437 A6NDN8 102 aa11.2□□□□□ -0.62
CPSF7-201ENST00000340437 COTL1Q14019 142 aa11.2□□□□□ -0.62
CPSF7-201ENST00000340437 F8W735 103 aaPredicted RBP11.19□□□□□ -0.62
CPSF7-201ENST00000340437 LY6EQ16553 131 aa11.19□□□□□ -0.62
CPSF7-201ENST00000340437 LINC01548A6NM66 108 aa11.19□□□□□ -0.62
CPSF7-201ENST00000340437 SMAD7O15105 426 aaKnown RBP11.19□□□□□ -0.62
CPSF7-201ENST00000340437 CDKN1BP46527 198 aa11.19□□□□□ -0.62
CPSF7-201ENST00000340437 IGF2-ASQ6U949 168 aa11.19□□□□□ -0.62
CPSF7-201ENST00000340437 C16orf54Q6UWD8 224 aa11.19□□□□□ -0.62
CPSF7-201ENST00000340437 HIVEP2P31629 2446 aa11.19□□□□□ -0.62
CPSF7-201ENST00000340437 FABP5P3A8MUU1 101 aa11.19□□□□□ -0.62
CPSF7-201ENST00000340437 K7ERJ3 54 aa11.19□□□□□ -0.62
CPSF7-201ENST00000340437 JMJD8Q96S16 334 aa11.19□□□□□ -0.62
CPSF7-201ENST00000340437 VKORC1Q9BQB6 163 aa11.19□□□□□ -0.62
CPSF7-201ENST00000340437 A0A0G2JLM5 398 aa11.18□□□□□ -0.62
CPSF7-201ENST00000340437 DEFB1P60022 68 aa11.18□□□□□ -0.62
CPSF7-201ENST00000340437 TMEM158Q8WZ71 300 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms