RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 KNCNA6PVL3 124 aa11.62□□□□□ -0.55
RET-201ENST00000340058 IGHV4-39P01824 125 aa11.62□□□□□ -0.55
RET-201ENST00000340058 LINC01356Q8N9X3 169 aa11.62□□□□□ -0.55
RET-201ENST00000340058 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.62□□□□□ -0.55
RET-201ENST00000340058 J3QR89 54 aa11.62□□□□□ -0.55
RET-201ENST00000340058 IGHV3-53P01767 116 aa11.62□□□□□ -0.55
RET-201ENST00000340058 IGHV4-59P01825 116 aa11.62□□□□□ -0.55
RET-201ENST00000340058 FRMD6-AS1P0C7T7 363 aa11.62□□□□□ -0.55
RET-201ENST00000340058 IFI27P40305 119 aaPredicted RBP11.62□□□□□ -0.55
RET-201ENST00000340058 ZNF295-AS1Q8N0V1 137 aa11.62□□□□□ -0.55
RET-201ENST00000340058 GEMIN7Q9H840 131 aaKnown RBP11.62□□□□□ -0.55
RET-201ENST00000340058 NCKAP5O14513 1909 aa11.62□□□□□ -0.55
RET-201ENST00000340058 CR1LQ2VPA4 569 aa11.62□□□□□ -0.55
RET-201ENST00000340058 FAM110DQ8TAY7 271 aaPredicted RBP11.62□□□□□ -0.55
RET-201ENST00000340058 A0A0U1RRA0 63 aa11.61□□□□□ -0.55
RET-201ENST00000340058 BPTFQ12830 3046 aa11.61□□□□□ -0.55
RET-201ENST00000340058 TRAV9-2A0A087WT02 112 aa11.61□□□□□ -0.55
RET-201ENST00000340058 NUTF2P61970 127 aaKnown RBP11.61□□□□□ -0.55
RET-201ENST00000340058 C1orf122Q6ZSJ8 110 aa11.61□□□□□ -0.55
RET-201ENST00000340058 PEF1Q9UBV8 284 aaKnown RBP11.61□□□□□ -0.55
RET-201ENST00000340058 LY96Q9Y6Y9 160 aa11.61□□□□□ -0.55
RET-201ENST00000340058 EML5Q05BV3 1969 aa11.61□□□□□ -0.55
RET-201ENST00000340058 TMEM262E9PQX1 116 aa11.61□□□□□ -0.55
RET-201ENST00000340058 SUMO2P61956 95 aaKnown RBP11.61□□□□□ -0.55
RET-201ENST00000340058 STHQ8IWL8 128 aa11.61□□□□□ -0.55
RET-201ENST00000340058 Q8N7P7 452 aa11.6□□□□□ -0.55
RET-201ENST00000340058 HCFC1P51610 2035 aa11.6□□□□□ -0.55
RET-201ENST00000340058 UBE2L6O14933 153 aa11.6□□□□□ -0.55
RET-201ENST00000340058 HOXB4P17483 251 aaPredicted RBP11.6□□□□□ -0.55
RET-201ENST00000340058 DEFB131AP59861 70 aa11.6□□□□□ -0.55
RET-201ENST00000340058 YPEL3P61236 119 aaPredicted RBP11.6□□□□□ -0.55
RET-201ENST00000340058 ATP5L2Q7Z4Y8 100 aa11.6□□□□□ -0.55
RET-201ENST00000340058 C18orf32Q8TCD1 76 aa11.6□□□□□ -0.55
RET-201ENST00000340058 ZC2HC1AQ96GY0 325 aa11.6□□□□□ -0.55
RET-201ENST00000340058 TRAV12-2A0A075B6T6 113 aa11.6□□□□□ -0.55
RET-201ENST00000340058 APOMO95445 188 aa11.6□□□□□ -0.55
RET-201ENST00000340058 LGALS3P17931 250 aaKnown RBP11.6□□□□□ -0.55
RET-201ENST00000340058 SPINK13Q1W4C9 94 aa11.6□□□□□ -0.55
RET-201ENST00000340058 C19orf54Q5BKX5 351 aa11.6□□□□□ -0.55
RET-201ENST00000340058 C9orf139Q6ZV77 190 aa11.6□□□□□ -0.55
RET-201ENST00000340058 A0A1B0GW15 77 aa11.59□□□□□ -0.55
RET-201ENST00000340058 OVOL1O14753 267 aa11.59□□□□□ -0.55
RET-201ENST00000340058 SAP30O75446 220 aa11.59□□□□□ -0.55
RET-201ENST00000340058 DAZ1Q9NQZ3 744 aaKnown RBP11.59□□□□□ -0.55
RET-201ENST00000340058 MGAQ8IWI9 3026 aa11.59□□□□□ -0.55
RET-201ENST00000340058 ATP5LO75964 103 aa11.59□□□□□ -0.55
RET-201ENST00000340058 DSCR9P59020 149 aa11.59□□□□□ -0.55
RET-201ENST00000340058 DEFB1P60022 68 aa11.59□□□□□ -0.55
RET-201ENST00000340058 IGLV1-47P01700 117 aa11.59□□□□□ -0.55
RET-201ENST00000340058 RPL35AP18077 110 aaKnown RBP11.59□□□□□ -0.55
RET-201ENST00000340058 DAZAP2Q15038 168 aaPredicted RBP11.59□□□□□ -0.55
RET-201ENST00000340058 PEMTQ9UBM1 199 aa11.59□□□□□ -0.55
RET-201ENST00000340058 C19orf84I3L1E1 186 aa11.58□□□□□ -0.55
RET-201ENST00000340058 K7EIM0 57 aa11.58□□□□□ -0.55
RET-201ENST00000340058 CD300EQ496F6 205 aaPredicted RBP11.58□□□□□ -0.55
RET-201ENST00000340058 C8orf86Q6ZUL3 223 aa11.58□□□□□ -0.55
RET-201ENST00000340058 TOMM7Q9P0U1 55 aa11.58□□□□□ -0.55
RET-201ENST00000340058 VWC2Q2TAL6 325 aa11.58□□□□□ -0.56
RET-201ENST00000340058 GTSCR1Q86UQ5 136 aa11.58□□□□□ -0.56
RET-201ENST00000340058 RCHY1Q96PM5 261 aa11.58□□□□□ -0.56
RET-201ENST00000340058 ST20Q9HBF5 79 aa11.58□□□□□ -0.56
RET-201ENST00000340058 IGHV7-81A0A0B4J1V7 117 aa11.58□□□□□ -0.56
RET-201ENST00000340058 DEFB136Q30KP8 78 aa11.58□□□□□ -0.56
RET-201ENST00000340058 DEFB112Q30KQ8 113 aa11.58□□□□□ -0.56
RET-201ENST00000340058 TEX29Q8N6K0 151 aa11.58□□□□□ -0.56
RET-201ENST00000340058 TRAV26-2A0A0B4J265 109 aa11.58□□□□□ -0.56
RET-201ENST00000340058 SLC25A16P16260 332 aa11.58□□□□□ -0.56
RET-201ENST00000340058 PRR25Q96S07 402 aa11.58□□□□□ -0.56
RET-201ENST00000340058 CGB3P0DN86 165 aa11.57□□□□□ -0.56
RET-201ENST00000340058 CGB7P0DN87 165 aa11.57□□□□□ -0.56
RET-201ENST00000340058 CDSNQ15517 529 aa11.57□□□□□ -0.56
RET-201ENST00000340058 C11orf1Q9H5F2 150 aa11.57□□□□□ -0.56
RET-201ENST00000340058 KLK9Q9UKQ9 250 aa11.57□□□□□ -0.56
RET-201ENST00000340058 STPG4Q8N801 248 aa11.57□□□□□ -0.56
RET-201ENST00000340058 LRP4O75096 1905 aa11.57□□□□□ -0.56
RET-201ENST00000340058 TMEM8BA6NDV4 472 aa11.57□□□□□ -0.56
RET-201ENST00000340058 FABP2P12104 132 aa11.57□□□□□ -0.56
RET-201ENST00000340058 PAX1P15863 534 aa11.57□□□□□ -0.56
RET-201ENST00000340058 PRSS57Q6UWY2 283 aa11.57□□□□□ -0.56
RET-201ENST00000340058 LYPD1Q8N2G4 141 aa11.57□□□□□ -0.56
RET-201ENST00000340058 THAP8Q8NA92 274 aa11.57□□□□□ -0.56
RET-201ENST00000340058 USMG5Q96IX5 58 aa11.57□□□□□ -0.56
RET-201ENST00000340058 H3BRN7 92 aa11.56□□□□□ -0.56
RET-201ENST00000340058 C11orf52Q96A22 123 aa11.56□□□□□ -0.56
RET-201ENST00000340058 NXT2Q9NPJ8 142 aaKnown RBP11.56□□□□□ -0.56
RET-201ENST00000340058 CENPVL3A0A0U1RRI6 287 aa11.56□□□□□ -0.56
RET-201ENST00000340058 SRSF8Q9BRL6 282 aaKnown RBP11.56□□□□□ -0.56
RET-201ENST00000340058 A0A087X0K7 114 aa11.56□□□□□ -0.56
RET-201ENST00000340058 MEIG1Q5JSS6 88 aa11.56□□□□□ -0.56
RET-201ENST00000340058 Q6ZWC4 215 aa11.56□□□□□ -0.56
RET-201ENST00000340058 NEGR1Q7Z3B1 354 aa11.56□□□□□ -0.56
RET-201ENST00000340058 TMEM158Q8WZ71 300 aa11.56□□□□□ -0.56
RET-201ENST00000340058 NUPR1O60356 82 aa11.55□□□□□ -0.56
RET-201ENST00000340058 LBHQ53QV2 105 aaPredicted RBP11.55□□□□□ -0.56
RET-201ENST00000340058 XCL2Q9UBD3 114 aa11.55□□□□□ -0.56
RET-201ENST00000340058 VCANP13611 3396 aa11.55□□□□□ -0.56
RET-201ENST00000340058 PPBPP02775 128 aa11.55□□□□□ -0.56
RET-201ENST00000340058 ZNF876PQ49A33 203 aa11.55□□□□□ -0.56
RET-201ENST00000340058 OR11H6Q8NGC7 330 aa11.55□□□□□ -0.56
RET-201ENST00000340058 NDUFS8O00217 210 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms