RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 SCN5AQ14524 2016 aa10.08□□□□□ -0.8
BRPF3-201ENST00000339717 LINC00473A8K010 186 aa10.08□□□□□ -0.8
BRPF3-201ENST00000339717 TDRD15B5MCY1 1934 aaKnown RBP10.07□□□□□ -0.8
BRPF3-201ENST00000339717 TRAV3A0A0B4J244 114 aa10.07□□□□□ -0.8
BRPF3-201ENST00000339717 OVOL1O14753 267 aa10.07□□□□□ -0.8
BRPF3-201ENST00000339717 LYPD6Q86Y78 171 aa10.07□□□□□ -0.8
BRPF3-201ENST00000339717 ZCCHC24Q8N2G6 241 aaKnown RBP10.07□□□□□ -0.8
BRPF3-201ENST00000339717 DDB2Q92466 427 aa10.07□□□□□ -0.8
BRPF3-201ENST00000339717 FXYD5Q96DB9 178 aa10.07□□□□□ -0.8
BRPF3-201ENST00000339717 APC2O95996 2303 aa10.07□□□□□ -0.8
BRPF3-201ENST00000339717 MRPS12O15235 138 aaKnown RBP10.07□□□□□ -0.8
BRPF3-201ENST00000339717 PMAIP1Q13794 54 aa10.07□□□□□ -0.8
BRPF3-201ENST00000339717 ELANEP08246 267 aa10.07□□□□□ -0.8
BRPF3-201ENST00000339717 LINC00158P58513 81 aa10.07□□□□□ -0.8
BRPF3-201ENST00000339717 TMEM14CQ9P0S9 112 aa10.07□□□□□ -0.8
BRPF3-201ENST00000339717 SBF2Q86WG5 1849 aa10.07□□□□□ -0.8
BRPF3-201ENST00000339717 FAM186AA6NE01 2351 aa10.06□□□□□ -0.8
BRPF3-201ENST00000339717 FREM3P0C091 2139 aa10.06□□□□□ -0.8
BRPF3-201ENST00000339717 TOMM7Q9P0U1 55 aa10.06□□□□□ -0.8
BRPF3-201ENST00000339717 RHOHQ15669 191 aa10.06□□□□□ -0.8
BRPF3-201ENST00000339717 PAX4O43316 350 aa10.06□□□□□ -0.8
BRPF3-201ENST00000339717 CCL3P10147 92 aa10.06□□□□□ -0.8
BRPF3-201ENST00000339717 VPREB1P12018 145 aa10.06□□□□□ -0.8
BRPF3-201ENST00000339717 DTX1Q86Y01 620 aa10.06□□□□□ -0.8
BRPF3-201ENST00000339717 FANCD2OSQ96PS1 177 aa10.06□□□□□ -0.8
BRPF3-201ENST00000339717 A0A0G2JMZ2 1700 aa10.05□□□□□ -0.8
BRPF3-201ENST00000339717 LRRC37A2A6NM11 1700 aa10.05□□□□□ -0.8
BRPF3-201ENST00000339717 IGHV1OR15-9A0A0B4J2B8 117 aa10.05□□□□□ -0.8
BRPF3-201ENST00000339717 CCL13Q99616 98 aa10.05□□□□□ -0.8
BRPF3-201ENST00000339717 MBD3L4A6NDZ8 208 aaPredicted RBP10.05□□□□□ -0.8
BRPF3-201ENST00000339717 MBD3L3A6NE82 208 aaPredicted RBP10.05□□□□□ -0.8
BRPF3-201ENST00000339717 MBD3L5A6NJ08 208 aaPredicted RBP10.05□□□□□ -0.8
BRPF3-201ENST00000339717 FAM201AQ5SY85 155 aa10.05□□□□□ -0.8
BRPF3-201ENST00000339717 PRIMA1Q86XR5 153 aa10.05□□□□□ -0.8
BRPF3-201ENST00000339717 RNF138Q8WVD3 245 aa10.05□□□□□ -0.8
BRPF3-201ENST00000339717 IGHV3-72A0A0B4J1Y9 119 aa10.05□□□□□ -0.8
BRPF3-201ENST00000339717 KIR2DL5BQ8NHK3 375 aa10.05□□□□□ -0.8
BRPF3-201ENST00000339717 COL4A5P29400 1685 aa10.05□□□□□ -0.8
BRPF3-201ENST00000339717 SPTA1P02549 2419 aa10.05□□□□□ -0.8
BRPF3-201ENST00000339717 TMEM133Q9H2Q1 129 aa10.05□□□□□ -0.8
BRPF3-201ENST00000339717 MYLKQ15746 1914 aa10.05□□□□□ -0.8
BRPF3-201ENST00000339717 DEFB109BQ30KR1 87 aa10.04□□□□□ -0.8
BRPF3-201ENST00000339717 C1orf210Q8IVY1 113 aa10.04□□□□□ -0.8
BRPF3-201ENST00000339717 TMEM14BQ9NUH8 114 aa10.04□□□□□ -0.8
BRPF3-201ENST00000339717 TRGV5A0A0B4J1U4 118 aa10.04□□□□□ -0.8
BRPF3-201ENST00000339717 IGKV3D-20A0A0C4DH25 116 aa10.04□□□□□ -0.8
BRPF3-201ENST00000339717 USP17L23D6RBM5 183 aa10.04□□□□□ -0.8
BRPF3-201ENST00000339717 HTN1P15515 57 aa10.04□□□□□ -0.8
BRPF3-201ENST00000339717 DYNAPQ8N1N2 210 aa10.04□□□□□ -0.8
BRPF3-201ENST00000339717 CRIPAKQ8N1N5 446 aa10.04□□□□□ -0.8
BRPF3-201ENST00000339717 H0YGX0 51 aa10.04□□□□□ -0.8
BRPF3-201ENST00000339717 BRWD3Q6RI45 1802 aa10.04□□□□□ -0.8
BRPF3-201ENST00000339717 PRR7Q8TB68 274 aa10.03□□□□□ -0.8
BRPF3-201ENST00000339717 TMEM167AQ8TBQ9 72 aa10.03□□□□□ -0.8
BRPF3-201ENST00000339717 KLF14Q8TD94 323 aaPredicted RBP10.03□□□□□ -0.8
BRPF3-201ENST00000339717 SHANK2-AS3Q9BTD1 123 aa10.03□□□□□ -0.8
BRPF3-201ENST00000339717 ORMDL1Q9P0S3 153 aa10.03□□□□□ -0.8
BRPF3-201ENST00000339717 TNS1Q9HBL0 1735 aaKnown RBP10.03□□□□□ -0.8
BRPF3-201ENST00000339717 C14orf178Q8N769 122 aaPredicted RBP10.03□□□□□ -0.8
BRPF3-201ENST00000339717 SPTSSBQ8NFR3 76 aa10.03□□□□□ -0.8
BRPF3-201ENST00000339717 TRPM6Q9BX84 2022 aa10.03□□□□□ -0.8
BRPF3-201ENST00000339717 LRRK1Q38SD2 2015 aa10.02□□□□□ -0.8
BRPF3-201ENST00000339717 RNASE4P34096 147 aaKnown RBP10.02□□□□□ -0.8
BRPF3-201ENST00000339717 GDF5OSQ5U4N7 250 aa10.02□□□□□ -0.8
BRPF3-201ENST00000339717 Q6ZQT7 251 aa10.02□□□□□ -0.8
BRPF3-201ENST00000339717 CCL17Q92583 94 aa10.02□□□□□ -0.8
BRPF3-201ENST00000339717 DCTN5Q9BTE1 182 aa10.02□□□□□ -0.8
BRPF3-201ENST00000339717 CEP290O15078 2479 aa10.02□□□□□ -0.81
BRPF3-201ENST00000339717 TRBV30A0A0K0K1B3 111 aa10.02□□□□□ -0.81
BRPF3-201ENST00000339717 IGHG3P01860 377 aa10.02□□□□□ -0.81
BRPF3-201ENST00000339717 DIAPH2-AS1Q14236 149 aa10.02□□□□□ -0.81
BRPF3-201ENST00000339717 DOCK4Q8N1I0 1966 aa10.02□□□□□ -0.81
BRPF3-201ENST00000339717 IGKV3D-15A0A087WSY6 115 aa10.02□□□□□ -0.81
BRPF3-201ENST00000339717 IGKV3-15P01624 115 aa10.02□□□□□ -0.81
BRPF3-201ENST00000339717 C20orf204Q6ZNR8 217 aa10.02□□□□□ -0.81
BRPF3-201ENST00000339717 KLHL30-AS1Q8NEE0 82 aa10.02□□□□□ -0.81
BRPF3-201ENST00000339717 JMJD7-PLA2G4BH0Y9G9 81 aa10.01□□□□□ -0.81
BRPF3-201ENST00000339717 SDIM1Q6ZPB5 146 aa10.01□□□□□ -0.81
BRPF3-201ENST00000339717 MBD6Q96DN6 1003 aa10.01□□□□□ -0.81
BRPF3-201ENST00000339717 IGKV3-7A0A075B6H7 116 aa10.01□□□□□ -0.81
BRPF3-201ENST00000339717 SRXN1Q9BYN0 137 aa10.01□□□□□ -0.81
BRPF3-201ENST00000339717 ASPHD1Q5U4P2 390 aa10.01□□□□□ -0.81
BRPF3-201ENST00000339717 ADAMTSL1Q8N6G6 1762 aa10.01□□□□□ -0.81
BRPF3-201ENST00000339717 K7EM74 188 aa10□□□□□ -0.81
BRPF3-201ENST00000339717 MRPL14Q6P1L8 145 aaKnown RBP10□□□□□ -0.81
BRPF3-201ENST00000339717 Q8TAT8 98 aa10□□□□□ -0.81
BRPF3-201ENST00000339717 C8orf49Q96NF6 230 aa10□□□□□ -0.81
BRPF3-201ENST00000339717 RALGAPA2Q2PPJ7 1873 aa10□□□□□ -0.81
BRPF3-201ENST00000339717 ECSCRQ19T08 205 aa10□□□□□ -0.81
BRPF3-201ENST00000339717 ZNF876PQ49A33 203 aa10□□□□□ -0.81
BRPF3-201ENST00000339717 PRR25Q96S07 402 aa10□□□□□ -0.81
BRPF3-201ENST00000339717 DOCK5Q9H7D0 1870 aa10□□□□□ -0.81
BRPF3-201ENST00000339717 ITLN1Q8WWA0 313 aa10□□□□□ -0.81
BRPF3-201ENST00000339717 PTPRDP23468 1912 aa10□□□□□ -0.81
BRPF3-201ENST00000339717 COL4A1P02462 1669 aa10□□□□□ -0.81
BRPF3-201ENST00000339717 TGFBR3LH3BV60 316 aa10□□□□□ -0.81
BRPF3-201ENST00000339717 CLEC2BQ92478 149 aa10□□□□□ -0.81
BRPF3-201ENST00000339717 HEATR1Q9H583 2144 aaKnown RBP9.99□□□□□ -0.81
BRPF3-201ENST00000339717 NRXN2Q9P2S2 1712 aa9.99□□□□□ -0.81
BRPF3-201ENST00000339717 TRBV7-7A0A0K0K1E9 115 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms