RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 INMT-MINDY4F8WBC2 141 aa7.45□□□□□ -1.22
CAPN3-202ENST00000337571 MPDU1O75352 247 aa7.45□□□□□ -1.22
CAPN3-202ENST00000337571 SLC25A5P05141 298 aaKnown RBP7.45□□□□□ -1.22
CAPN3-202ENST00000337571 CT45A10P0DMU9 189 aa7.45□□□□□ -1.22
CAPN3-202ENST00000337571 KIR3DS1Q14943 382 aa7.45□□□□□ -1.22
CAPN3-202ENST00000337571 ENKURQ8TC29 256 aa7.45□□□□□ -1.22
CAPN3-202ENST00000337571 ZNF503Q96F45 646 aa7.45□□□□□ -1.22
CAPN3-202ENST00000337571 ODF3Q96PU9 254 aa7.45□□□□□ -1.22
CAPN3-202ENST00000337571 SEC22CQ9BRL7 303 aa7.45□□□□□ -1.22
CAPN3-202ENST00000337571 AAMDCQ9H7C9 122 aa7.45□□□□□ -1.22
CAPN3-202ENST00000337571 Q9H8V8 135 aa7.45□□□□□ -1.22
CAPN3-202ENST00000337571 ZNF586Q9NXT0 402 aa7.45□□□□□ -1.22
CAPN3-202ENST00000337571 PRELID1Q9Y255 219 aa7.45□□□□□ -1.22
CAPN3-202ENST00000337571 ALG5Q9Y673 324 aa7.45□□□□□ -1.22
CAPN3-202ENST00000337571 A0A0J9YY99 117 aa7.44□□□□□ -1.22
CAPN3-202ENST00000337571 C16orf90A8MZG2 172 aa7.44□□□□□ -1.22
CAPN3-202ENST00000337571 NPIPB6E9PJ23 425 aa7.44□□□□□ -1.22
CAPN3-202ENST00000337571 ZNF253O75346 499 aa7.44□□□□□ -1.22
CAPN3-202ENST00000337571 FGF7P21781 194 aa7.44□□□□□ -1.22
CAPN3-202ENST00000337571 VWC2Q2TAL6 325 aa7.44□□□□□ -1.22
CAPN3-202ENST00000337571 TMEM252Q8N6L7 170 aa7.44□□□□□ -1.22
CAPN3-202ENST00000337571 RXFP4Q8TDU9 374 aa7.44□□□□□ -1.22
CAPN3-202ENST00000337571 MRPL53Q96EL3 112 aaKnown RBP7.44□□□□□ -1.22
CAPN3-202ENST00000337571 LINC00477Q96M19 166 aa7.44□□□□□ -1.22
CAPN3-202ENST00000337571 GPN1Q9HCN4 374 aaPredicted RBP7.44□□□□□ -1.22
CAPN3-202ENST00000337571 LYRM2Q9NU23 88 aaPredicted RBP7.44□□□□□ -1.22
CAPN3-202ENST00000337571 TRBV19A0A075B6N1 114 aa7.43□□□□□ -1.22
CAPN3-202ENST00000337571 TRGV2A0A075B6R0 118 aa7.43□□□□□ -1.22
CAPN3-202ENST00000337571 H3BNG1 76 aa7.43□□□□□ -1.22
CAPN3-202ENST00000337571 HIST1H1EP10412 219 aaKnown RBP7.43□□□□□ -1.22
CAPN3-202ENST00000337571 DAZ2Q13117 558 aaKnown RBP7.43□□□□□ -1.22
CAPN3-202ENST00000337571 RAB32Q13637 225 aa7.43□□□□□ -1.22
CAPN3-202ENST00000337571 TTC32Q5I0X7 151 aa7.43□□□□□ -1.22
CAPN3-202ENST00000337571 ZNF575Q86XF7 245 aa7.43□□□□□ -1.22
CAPN3-202ENST00000337571 ZNF680Q8NEM1 530 aa7.43□□□□□ -1.22
CAPN3-202ENST00000337571 BLNKQ8WV28 456 aa7.43□□□□□ -1.22
CAPN3-202ENST00000337571 TMEM14CQ9P0S9 112 aa7.43□□□□□ -1.22
CAPN3-202ENST00000337571 IGSF23A1L1A6 192 aa7.42□□□□□ -1.22
CAPN3-202ENST00000337571 C7orf71A4D174 169 aa7.42□□□□□ -1.22
CAPN3-202ENST00000337571 GPX1P07203 203 aa7.42□□□□□ -1.22
CAPN3-202ENST00000337571 HOXA5P20719 270 aa7.42□□□□□ -1.22
CAPN3-202ENST00000337571 RNASE4P34096 147 aaKnown RBP7.42□□□□□ -1.22
CAPN3-202ENST00000337571 ERCC8Q13216 396 aa7.42□□□□□ -1.22
CAPN3-202ENST00000337571 PDE6HQ13956 83 aa7.42□□□□□ -1.22
CAPN3-202ENST00000337571 TMEM78Q5T7P6 136 aa7.42□□□□□ -1.22
CAPN3-202ENST00000337571 LINC00612Q8N6U2 182 aa7.42□□□□□ -1.22
CAPN3-202ENST00000337571 SLC25A31Q9H0C2 315 aa7.42□□□□□ -1.22
CAPN3-202ENST00000337571 C11orf1Q9H5F2 150 aa7.42□□□□□ -1.22
CAPN3-202ENST00000337571 M0R3E3 92 aa7.41□□□□□ -1.22
CAPN3-202ENST00000337571 ESRGQ1W209 222 aa7.41□□□□□ -1.22
CAPN3-202ENST00000337571 Q6ZTI0 123 aa7.41□□□□□ -1.22
CAPN3-202ENST00000337571 EXOC3-AS1Q8N2X6 119 aa7.41□□□□□ -1.22
CAPN3-202ENST00000337571 EIF4E3Q8N5X7 224 aaKnown RBP7.41□□□□□ -1.22
CAPN3-202ENST00000337571 ST6GAL2Q96JF0 529 aa7.41□□□□□ -1.22
CAPN3-202ENST00000337571 NPCDR1Q9BY65 106 aa7.41□□□□□ -1.22
CAPN3-202ENST00000337571 TMPRSS5Q9H3S3 457 aa7.41□□□□□ -1.22
CAPN3-202ENST00000337571 GSN-AS1Q9NRJ2 163 aa7.41□□□□□ -1.22
CAPN3-202ENST00000337571 TRGV1A0A0A0MS02 117 aa7.4□□□□□ -1.22
CAPN3-202ENST00000337571 E5RGE8 158 aa7.4□□□□□ -1.22
CAPN3-202ENST00000337571 RGS13O14921 159 aa7.4□□□□□ -1.22
CAPN3-202ENST00000337571 NMBP08949 121 aa7.4□□□□□ -1.22
CAPN3-202ENST00000337571 NBEAP1P0C6P0 100 aa7.4□□□□□ -1.22
CAPN3-202ENST00000337571 PYYP10082 97 aa7.4□□□□□ -1.22
CAPN3-202ENST00000337571 NHLH2Q02577 135 aa7.4□□□□□ -1.22
CAPN3-202ENST00000337571 IL15RAQ13261 267 aa7.4□□□□□ -1.22
CAPN3-202ENST00000337571 ICAM4Q14773 271 aa7.4□□□□□ -1.22
CAPN3-202ENST00000337571 C9orf47Q6ZRZ4 202 aa7.4□□□□□ -1.22
CAPN3-202ENST00000337571 OR5C1Q8NGR4 320 aa7.4□□□□□ -1.22
CAPN3-202ENST00000337571 AGPAT4-IT1Q9H0P7 198 aa7.4□□□□□ -1.22
CAPN3-202ENST00000337571 OR51M1Q9H341 326 aa7.4□□□□□ -1.22
CAPN3-202ENST00000337571 KCNIP2Q9NS61 270 aa7.4□□□□□ -1.22
CAPN3-202ENST00000337571 FUT9Q9Y231 359 aa7.4□□□□□ -1.22
CAPN3-202ENST00000337571 MUC4Q99102 2169 aa7.4□□□□□ -1.23
CAPN3-202ENST00000337571 A0A1W2PPQ1 181 aa7.39□□□□□ -1.23
CAPN3-202ENST00000337571 KLLNB2CW77 178 aa7.39□□□□□ -1.23
CAPN3-202ENST00000337571 C17orf112F2Z3M2 114 aa7.39□□□□□ -1.23
CAPN3-202ENST00000337571 ZNF324O75467 553 aaPredicted RBP7.39□□□□□ -1.23
CAPN3-202ENST00000337571 NDUFB4O95168 129 aa7.39□□□□□ -1.23
CAPN3-202ENST00000337571 CSN1S1P47710 185 aa7.39□□□□□ -1.23
CAPN3-202ENST00000337571 CYCSP99999 105 aaKnown RBP7.39□□□□□ -1.23
CAPN3-202ENST00000337571 BTN1A1Q13410 526 aa7.39□□□□□ -1.23
CAPN3-202ENST00000337571 ANXA2RQ3ZCQ2 193 aa7.39□□□□□ -1.23
CAPN3-202ENST00000337571 FAM122CQ6P4D5 195 aa7.39□□□□□ -1.23
CAPN3-202ENST00000337571 THAP6Q8TBB0 222 aa7.39□□□□□ -1.23
CAPN3-202ENST00000337571 LINC00467Q9BRT7 94 aa7.39□□□□□ -1.23
CAPN3-202ENST00000337571 UPK3BQ9BT76 320 aa7.39□□□□□ -1.23
CAPN3-202ENST00000337571 Q9H3A6 140 aa7.39□□□□□ -1.23
CAPN3-202ENST00000337571 MRPS16Q9Y3D3 137 aaKnown RBP7.39□□□□□ -1.23
CAPN3-202ENST00000337571 CRISP2P16562 243 aa7.38□□□□□ -1.23
CAPN3-202ENST00000337571 BTF3P20290 206 aaKnown RBP7.38□□□□□ -1.23
CAPN3-202ENST00000337571 SLAQ13239 276 aa7.38□□□□□ -1.23
CAPN3-202ENST00000337571 LRRC37A5PQ49AS3 106 aa7.38□□□□□ -1.23
CAPN3-202ENST00000337571 GCSAMLQ5JQS6 135 aa7.38□□□□□ -1.23
CAPN3-202ENST00000337571 MIR17HGQ75NE6 70 aa7.38□□□□□ -1.23
CAPN3-202ENST00000337571 FAM19A4Q96LR4 140 aa7.38□□□□□ -1.23
CAPN3-202ENST00000337571 C18orf15Q96N68 181 aa7.38□□□□□ -1.23
CAPN3-202ENST00000337571 ARPC5LQ9BPX5 153 aa7.38□□□□□ -1.23
CAPN3-202ENST00000337571 PAXXQ9BUH6 204 aa7.38□□□□□ -1.23
CAPN3-202ENST00000337571 SLC25A2Q9BXI2 301 aa7.38□□□□□ -1.23
CAPN3-202ENST00000337571 MRPL32Q9BYC8 188 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms