RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 RNASE2P10153 161 aaKnown RBP6.52□□□□□ -1.37
TNPO1-201ENST00000337273 TMEM131Q92545 1883 aa6.52□□□□□ -1.37
TNPO1-201ENST00000337273 TRAV3A0A0B4J244 114 aa6.52□□□□□ -1.37
TNPO1-201ENST00000337273 C9orf153Q5TBE3 101 aa6.52□□□□□ -1.37
TNPO1-201ENST00000337273 C10orf55Q5SWW7 151 aa6.52□□□□□ -1.37
TNPO1-201ENST00000337273 LINC01545Q5VT33 79 aa6.52□□□□□ -1.37
TNPO1-201ENST00000337273 FAM104BQ5XKR9 115 aa6.52□□□□□ -1.37
TNPO1-201ENST00000337273 UBL5Q9BZL1 73 aa6.52□□□□□ -1.37
TNPO1-201ENST00000337273 TMEM14CQ9P0S9 112 aa6.52□□□□□ -1.37
TNPO1-201ENST00000337273 KIAA1549LQ6ZVL6 1849 aa6.52□□□□□ -1.37
TNPO1-201ENST00000337273 EPOPA6NHQ4 379 aa6.52□□□□□ -1.37
TNPO1-201ENST00000337273 SRRM4A7MD48 611 aaKnown RBP6.52□□□□□ -1.37
TNPO1-201ENST00000337273 PMVKQ15126 192 aa6.52□□□□□ -1.37
TNPO1-201ENST00000337273 VMO1Q7Z5L0 202 aa6.52□□□□□ -1.37
TNPO1-201ENST00000337273 DAZ1Q9NQZ3 744 aaKnown RBP6.52□□□□□ -1.37
TNPO1-201ENST00000337273 SPRR3Q9UBC9 169 aa6.52□□□□□ -1.37
TNPO1-201ENST00000337273 PRIMA1Q86XR5 153 aa6.52□□□□□ -1.37
TNPO1-201ENST00000337273 TMEM14BQ9NUH8 114 aa6.52□□□□□ -1.37
TNPO1-201ENST00000337273 METRNQ9UJH8 293 aa6.52□□□□□ -1.37
TNPO1-201ENST00000337273 RSPO3Q9BXY4 272 aaPredicted RBP6.52□□□□□ -1.37
TNPO1-201ENST00000337273 MBD3L4A6NDZ8 208 aaPredicted RBP6.52□□□□□ -1.37
TNPO1-201ENST00000337273 MBD3L3A6NE82 208 aaPredicted RBP6.52□□□□□ -1.37
TNPO1-201ENST00000337273 MBD3L5A6NJ08 208 aaPredicted RBP6.52□□□□□ -1.37
TNPO1-201ENST00000337273 IGLC2P0DOY2 106 aa6.52□□□□□ -1.37
TNPO1-201ENST00000337273 IGLC3P0DOY3 106 aa6.52□□□□□ -1.37
TNPO1-201ENST00000337273 GATA3P23771 443 aa6.52□□□□□ -1.37
TNPO1-201ENST00000337273 MBD3L2Q8NHZ7 208 aaPredicted RBP6.52□□□□□ -1.37
TNPO1-201ENST00000337273 IGHV2-5P01817 119 aa6.51□□□□□ -1.37
TNPO1-201ENST00000337273 ZNF474Q6S9Z5 364 aaPredicted RBP6.51□□□□□ -1.37
TNPO1-201ENST00000337273 LINC00479Q96M42 142 aa6.51□□□□□ -1.37
TNPO1-201ENST00000337273 ACYP1P07311 99 aa6.51□□□□□ -1.37
TNPO1-201ENST00000337273 ZNF672Q499Z4 452 aaPredicted RBP6.51□□□□□ -1.37
TNPO1-201ENST00000337273 RNF166Q96A37 237 aaPredicted RBP6.51□□□□□ -1.37
TNPO1-201ENST00000337273 ZFHX2Q9C0A1 2572 aaPredicted RBP6.51□□□□□ -1.37
TNPO1-201ENST00000337273 TRAV8-3A0A0A6YYJ7 113 aa6.51□□□□□ -1.37
TNPO1-201ENST00000337273 IFITM1P13164 125 aa6.51□□□□□ -1.37
TNPO1-201ENST00000337273 HTN3P15516 51 aa6.51□□□□□ -1.37
TNPO1-201ENST00000337273 NUP210LQ5VU65 1888 aa6.51□□□□□ -1.37
TNPO1-201ENST00000337273 LYNX1G3V0Z9 82 aa6.51□□□□□ -1.37
TNPO1-201ENST00000337273 LYNX1P0DP58 116 aa6.51□□□□□ -1.37
TNPO1-201ENST00000337273 ZNF462Q96JM2 2506 aa6.51□□□□□ -1.37
TNPO1-201ENST00000337273 HIVEP3Q5T1R4 2406 aa6.51□□□□□ -1.37
TNPO1-201ENST00000337273 SIP14410 1827 aa6.51□□□□□ -1.37
TNPO1-201ENST00000337273 LINC00473A8K010 186 aa6.51□□□□□ -1.37
TNPO1-201ENST00000337273 RBMY1FQ15415 496 aaKnown RBP6.51□□□□□ -1.37
TNPO1-201ENST00000337273 NLRC5Q86WI3 1866 aa6.51□□□□□ -1.37
TNPO1-201ENST00000337273 I3L3M4 83 aa6.51□□□□□ -1.37
TNPO1-201ENST00000337273 LINC00527Q9UJ94 153 aa6.51□□□□□ -1.37
TNPO1-201ENST00000337273 PKD1L2Q7Z442 2459 aa6.5□□□□□ -1.37
TNPO1-201ENST00000337273 AMN1Q8IY45 258 aa6.5□□□□□ -1.37
TNPO1-201ENST00000337273 TSSC4Q9Y5U2 329 aaPredicted RBP6.5□□□□□ -1.37
TNPO1-201ENST00000337273 ADAMTS9Q9P2N4 1935 aa6.5□□□□□ -1.37
TNPO1-201ENST00000337273 TRAV40A0A0B4J280 105 aa6.5□□□□□ -1.37
TNPO1-201ENST00000337273 K7EP13 123 aa6.5□□□□□ -1.37
TNPO1-201ENST00000337273 EFNA2O43921 213 aa6.5□□□□□ -1.37
TNPO1-201ENST00000337273 RPL15P61313 204 aaKnown RBP6.5□□□□□ -1.37
TNPO1-201ENST00000337273 MST1LQ2TV78 715 aa6.5□□□□□ -1.37
TNPO1-201ENST00000337273 GAGE2AQ6NT46 116 aa6.5□□□□□ -1.37
TNPO1-201ENST00000337273 COLQQ9Y215 455 aaPredicted RBP6.5□□□□□ -1.37
TNPO1-201ENST00000337273 SLC25A16P16260 332 aa6.5□□□□□ -1.37
TNPO1-201ENST00000337273 VWCEQ96DN2 955 aa6.5□□□□□ -1.37
TNPO1-201ENST00000337273 PYGO2Q9BRQ0 406 aa6.5□□□□□ -1.37
TNPO1-201ENST00000337273 BRWD3Q6RI45 1802 aa6.5□□□□□ -1.37
TNPO1-201ENST00000337273 GAFA1Q96PS6 74 aa6.5□□□□□ -1.37
TNPO1-201ENST00000337273 ATP6V0BQ99437 205 aa6.5□□□□□ -1.37
TNPO1-201ENST00000337273 K7EP34 96 aa6.49□□□□□ -1.37
TNPO1-201ENST00000337273 ARMS2P0C7Q2 107 aa6.49□□□□□ -1.37
TNPO1-201ENST00000337273 HLA-DMBP28068 263 aa6.49□□□□□ -1.37
TNPO1-201ENST00000337273 Q6ZWC4 215 aa6.49□□□□□ -1.37
TNPO1-201ENST00000337273 HS3ST6Q96QI5 342 aa6.49□□□□□ -1.37
TNPO1-201ENST00000337273 C20orf78Q9BR46 151 aa6.49□□□□□ -1.37
TNPO1-201ENST00000337273 B4DSR2 109 aa6.49□□□□□ -1.37
TNPO1-201ENST00000337273 A0A1W2PPM0 123 aa6.49□□□□□ -1.37
TNPO1-201ENST00000337273 NDUFA4L2Q9NRX3 87 aa6.49□□□□□ -1.37
TNPO1-201ENST00000337273 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.49□□□□□ -1.37
TNPO1-201ENST00000337273 IGHG3P01860 377 aa6.49□□□□□ -1.37
TNPO1-201ENST00000337273 CLPSP04118 112 aa6.49□□□□□ -1.37
TNPO1-201ENST00000337273 CRIPAKQ8N1N5 446 aa6.49□□□□□ -1.37
TNPO1-201ENST00000337273 SPXQ9BT56 116 aa6.49□□□□□ -1.37
TNPO1-201ENST00000337273 ETV2O00321 342 aaPredicted RBP6.49□□□□□ -1.37
TNPO1-201ENST00000337273 RNASE13Q5GAN3 156 aaKnown RBP6.49□□□□□ -1.37
TNPO1-201ENST00000337273 C2orf66Q6UXQ4 117 aa6.49□□□□□ -1.37
TNPO1-201ENST00000337273 CEND1Q8N111 149 aa6.49□□□□□ -1.37
TNPO1-201ENST00000337273 C11orf52Q96A22 123 aa6.49□□□□□ -1.37
TNPO1-201ENST00000337273 SAP30O75446 220 aa6.49□□□□□ -1.37
TNPO1-201ENST00000337273 PRO1854Q9UHT4 67 aa6.49□□□□□ -1.37
TNPO1-201ENST00000337273 V9GYV3 84 aa6.49□□□□□ -1.37
TNPO1-201ENST00000337273 PRSS47A8MTI9 375 aa6.48□□□□□ -1.37
TNPO1-201ENST00000337273 LINC00173Q6ZV60 143 aa6.48□□□□□ -1.37
TNPO1-201ENST00000337273 C14orf178Q8N769 122 aaPredicted RBP6.48□□□□□ -1.37
TNPO1-201ENST00000337273 WIPF2Q8TF74 440 aaPredicted RBP6.48□□□□□ -1.37
TNPO1-201ENST00000337273 CCDC168Q8NDH2 2452 aa6.48□□□□□ -1.37
TNPO1-201ENST00000337273 TRAV13-2A0A0B4J235 113 aa6.48□□□□□ -1.37
TNPO1-201ENST00000337273 TRAV26-2A0A0B4J265 109 aa6.48□□□□□ -1.37
TNPO1-201ENST00000337273 H3BQ85 93 aa6.48□□□□□ -1.37
TNPO1-201ENST00000337273 HLA-DRB4P13762 266 aa6.48□□□□□ -1.37
TNPO1-201ENST00000337273 HLA-DRB4X5D2U9 266 aa6.48□□□□□ -1.37
TNPO1-201ENST00000337273 FAM110DQ8TAY7 271 aaPredicted RBP6.48□□□□□ -1.37
TNPO1-201ENST00000337273 CLPSL1A2RUU4 121 aa6.48□□□□□ -1.37
TNPO1-201ENST00000337273 TRAV13-1A0A0B4J241 112 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms