RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 IGKV2D-26A0A0A0MRZ7 120 aa18.42■□□□□ 0.54
TSKU-201ENST00000333090 FABP2P12104 132 aa18.42■□□□□ 0.54
TSKU-201ENST00000333090 HLA-DMBP28068 263 aa18.42■□□□□ 0.54
TSKU-201ENST00000333090 HES1Q14469 280 aa18.42■□□□□ 0.54
TSKU-201ENST00000333090 FANCD2OSQ96PS1 177 aa18.42■□□□□ 0.54
TSKU-201ENST00000333090 ABCA4P78363 2273 aa18.42■□□□□ 0.54
TSKU-201ENST00000333090 ARHGAP32A7KAX9 2087 aa18.41■□□□□ 0.54
TSKU-201ENST00000333090 IGLC6P0CF74 106 aa18.41■□□□□ 0.54
TSKU-201ENST00000333090 BMI1P35226 326 aa18.41■□□□□ 0.54
TSKU-201ENST00000333090 NEGR1Q7Z3B1 354 aa18.41■□□□□ 0.54
TSKU-201ENST00000333090 OR5A1Q8NGJ0 315 aa18.41■□□□□ 0.54
TSKU-201ENST00000333090 RPL7P18124 248 aaKnown RBP18.41■□□□□ 0.54
TSKU-201ENST00000333090 PRSS1P07477 247 aa18.4■□□□□ 0.54
TSKU-201ENST00000333090 EVI2AP22794 236 aa18.4■□□□□ 0.54
TSKU-201ENST00000333090 FXYD2P54710 66 aa18.4■□□□□ 0.54
TSKU-201ENST00000333090 SAMD5Q5TGI4 173 aa18.4■□□□□ 0.54
TSKU-201ENST00000333090 COX8CQ7Z4L0 72 aa18.4■□□□□ 0.54
TSKU-201ENST00000333090 Q8NA96 180 aa18.4■□□□□ 0.54
TSKU-201ENST00000333090 RNF185Q96GF1 192 aa18.4■□□□□ 0.54
TSKU-201ENST00000333090 NPFFR1Q9GZQ6 430 aa18.4■□□□□ 0.54
TSKU-201ENST00000333090 IGHV3OR16-8A0A075B7F1 116 aa18.39■□□□□ 0.53
TSKU-201ENST00000333090 FBLL1A6NHQ2 334 aaKnown RBP18.39■□□□□ 0.53
TSKU-201ENST00000333090 F8W735 103 aaPredicted RBP18.39■□□□□ 0.53
TSKU-201ENST00000333090 SMIM13P0DJ93 91 aa18.39■□□□□ 0.53
TSKU-201ENST00000333090 ODF1Q14990 250 aa18.39■□□□□ 0.53
TSKU-201ENST00000333090 C21orf62Q9NYP8 219 aa18.39■□□□□ 0.53
TSKU-201ENST00000333090 IGLV11-55A0A075B6I3 123 aa18.38■□□□□ 0.53
TSKU-201ENST00000333090 TMEM238C9JI98 176 aa18.38■□□□□ 0.53
TSKU-201ENST00000333090 ZNF575Q86XF7 245 aa18.38■□□□□ 0.53
TSKU-201ENST00000333090 PPIFP30405 207 aaKnown RBP18.37■□□□□ 0.53
TSKU-201ENST00000333090 DPM3Q9P2X0 92 aa18.37■□□□□ 0.53
TSKU-201ENST00000333090 HHLA3Q9XRX5 114 aa18.37■□□□□ 0.53
TSKU-201ENST00000333090 IGHV3-35A0A0C4DH35 117 aa18.36■□□□□ 0.53
TSKU-201ENST00000333090 B9A039 149 aa18.36■□□□□ 0.53
TSKU-201ENST00000333090 K7ERJ3 54 aa18.36■□□□□ 0.53
TSKU-201ENST00000333090 TNFRSF6BO95407 300 aa18.36■□□□□ 0.53
TSKU-201ENST00000333090 GATA1P15976 413 aaPredicted RBP18.36■□□□□ 0.53
TSKU-201ENST00000333090 FCER1GP30273 86 aa18.36■□□□□ 0.53
TSKU-201ENST00000333090 ZNF562Q6V9R5 426 aa18.36■□□□□ 0.53
TSKU-201ENST00000333090 PTPRQQ9UMZ3 2332 aa18.36■□□□□ 0.53
TSKU-201ENST00000333090 CHAC1Q9BUX1 264 aa18.36■□□□□ 0.53
TSKU-201ENST00000333090 IGHG4P01861 327 aa18.36■□□□□ 0.53
TSKU-201ENST00000333090 C5orf64Q2M2E5 130 aa18.36■□□□□ 0.53
TSKU-201ENST00000333090 CFHR4Q92496 578 aa18.36■□□□□ 0.53
TSKU-201ENST00000333090 SMAD5-AS1Q9Y6J3 95 aa18.36■□□□□ 0.53
TSKU-201ENST00000333090 KLRD1Q13241 179 aa18.35■□□□□ 0.53
TSKU-201ENST00000333090 GTSCR1Q86UQ5 136 aa18.35■□□□□ 0.53
TSKU-201ENST00000333090 FOXC2Q99958 501 aa18.35■□□□□ 0.53
TSKU-201ENST00000333090 NDUFA3O95167 84 aa18.35■□□□□ 0.53
TSKU-201ENST00000333090 IGKCP01834 107 aa18.35■□□□□ 0.53
TSKU-201ENST00000333090 RPL24P83731 157 aaKnown RBP18.35■□□□□ 0.53
TSKU-201ENST00000333090 NDPQ00604 133 aa18.35■□□□□ 0.53
TSKU-201ENST00000333090 ERCC8Q13216 396 aa18.34■□□□□ 0.53
TSKU-201ENST00000333090 NPBQ8NG41 125 aa18.34■□□□□ 0.53
TSKU-201ENST00000333090 NXT2Q9NPJ8 142 aaKnown RBP18.34■□□□□ 0.53
TSKU-201ENST00000333090 PIFOQ8TCI5 191 aa18.34■□□□□ 0.53
TSKU-201ENST00000333090 ARPC1AQ92747 370 aa18.34■□□□□ 0.53
TSKU-201ENST00000333090 ZMAT4Q9H898 229 aa18.34■□□□□ 0.53
TSKU-201ENST00000333090 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.33■□□□□ 0.53
TSKU-201ENST00000333090 NCBP2LA6PVI3 153 aaKnown RBP18.33■□□□□ 0.53
TSKU-201ENST00000333090 FABP5P3A8MUU1 101 aa18.33■□□□□ 0.53
TSKU-201ENST00000333090 TMEM158Q8WZ71 300 aa18.33■□□□□ 0.53
TSKU-201ENST00000333090 ZNF48Q96MX3 618 aaPredicted RBP18.33■□□□□ 0.52
TSKU-201ENST00000333090 TRBV25-1A0A075B6N4 114 aa18.32■□□□□ 0.52
TSKU-201ENST00000333090 CD3EP07766 207 aa18.32■□□□□ 0.52
TSKU-201ENST00000333090 FOXC1Q12948 553 aa18.32■□□□□ 0.52
TSKU-201ENST00000333090 ZC2HC1BQ5TFG8 222 aa18.32■□□□□ 0.52
TSKU-201ENST00000333090 DYNAPQ8N1N2 210 aa18.32■□□□□ 0.52
TSKU-201ENST00000333090 HIGD1BQ9P298 99 aa18.32■□□□□ 0.52
TSKU-201ENST00000333090 K7EMI3 77 aa18.32■□□□□ 0.52
TSKU-201ENST00000333090 CNFNQ9BYD5 112 aa18.32■□□□□ 0.52
TSKU-201ENST00000333090 NHP2Q9NX24 153 aaKnown RBP18.32■□□□□ 0.52
TSKU-201ENST00000333090 CTSGP08311 255 aa18.31■□□□□ 0.52
TSKU-201ENST00000333090 CEACAM3P40198 252 aa18.3■□□□□ 0.52
TSKU-201ENST00000333090 DTX2Q86UW9 622 aa18.3■□□□□ 0.52
TSKU-201ENST00000333090 TMEM8BA6NDV4 472 aa18.3■□□□□ 0.52
TSKU-201ENST00000333090 LINC01546A6NGU7 62 aa18.3■□□□□ 0.52
TSKU-201ENST00000333090 PRAC2D3DTV9 90 aa18.3■□□□□ 0.52
TSKU-201ENST00000333090 LY6HO94772 140 aa18.3■□□□□ 0.52
TSKU-201ENST00000333090 TMEM160Q9NX00 188 aa18.3■□□□□ 0.52
TSKU-201ENST00000333090 DPM2O94777 84 aa18.29■□□□□ 0.52
TSKU-201ENST00000333090 CACNA1BQ00975 2339 aa18.29■□□□□ 0.52
TSKU-201ENST00000333090 COL12A1Q99715 3063 aa18.29■□□□□ 0.52
TSKU-201ENST00000333090 TEX48A0A1B0GUV7 120 aa18.29■□□□□ 0.52
TSKU-201ENST00000333090 PSMG4Q5JS54 123 aa18.29■□□□□ 0.52
TSKU-201ENST00000333090 TTC9CQ8N5M4 171 aa18.29■□□□□ 0.52
TSKU-201ENST00000333090 ZNF672Q499Z4 452 aaPredicted RBP18.29■□□□□ 0.52
TSKU-201ENST00000333090 OR11H6Q8NGC7 330 aa18.29■□□□□ 0.52
TSKU-201ENST00000333090 SMIM17P0DL12 118 aa18.28■□□□□ 0.52
TSKU-201ENST00000333090 IL17RELQ6ZVW7 336 aa18.28■□□□□ 0.52
TSKU-201ENST00000333090 RNF182Q8N6D2 247 aa18.28■□□□□ 0.52
TSKU-201ENST00000333090 TRAV40A0A0B4J280 105 aa18.28■□□□□ 0.52
TSKU-201ENST00000333090 GRNP28799 593 aaKnown RBP18.28■□□□□ 0.52
TSKU-201ENST00000333090 PSMG3-AS1Q96PY0 264 aa18.28■□□□□ 0.52
TSKU-201ENST00000333090 SRSF2Q01130 221 aaKnown RBP18.27■□□□□ 0.52
TSKU-201ENST00000333090 LY6G5BQ8NDX9 201 aa18.27■□□□□ 0.52
TSKU-201ENST00000333090 ANKHD1Q8IWZ3 2542 aaKnown RBP18.27■□□□□ 0.51
TSKU-201ENST00000333090 PHLDA1Q8WV24 401 aaPredicted RBP18.27■□□□□ 0.51
TSKU-201ENST00000333090 HRNRQ86YZ3 2850 aaPredicted RBP18.26■□□□□ 0.51
TSKU-201ENST00000333090 ATP5LO75964 103 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms