RNA–Protein interactions for RNA: ENST00000331462.5

HOXD1-201, Transcript of homeobox D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD1, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1-201ENST00000331462 ABCA4P78363 2273 aa17.45■□□□□ 0.38
HOXD1-201ENST00000331462 BUB3O43684 328 aa17.45■□□□□ 0.38
HOXD1-201ENST00000331462 BOD1L2Q8IYS8 172 aa17.45■□□□□ 0.38
HOXD1-201ENST00000331462 IFI27L1Q96BM0 104 aa17.45■□□□□ 0.38
HOXD1-201ENST00000331462 SLC50A1Q9BRV3 221 aa17.45■□□□□ 0.38
HOXD1-201ENST00000331462 SPTBN4Q9H254 2564 aa17.45■□□□□ 0.38
HOXD1-201ENST00000331462 CACNG7P62955 275 aa17.44■□□□□ 0.38
HOXD1-201ENST00000331462 KLRB1Q12918 225 aa17.44■□□□□ 0.38
HOXD1-201ENST00000331462 C15orf32Q32M92 178 aa17.44■□□□□ 0.38
HOXD1-201ENST00000331462 IGFL4Q6B9Z1 124 aa17.44■□□□□ 0.38
HOXD1-201ENST00000331462 AJUBAQ96IF1 538 aa17.44■□□□□ 0.38
HOXD1-201ENST00000331462 RBX1P62877 108 aa17.44■□□□□ 0.38
HOXD1-201ENST00000331462 SPTBN2O15020 2390 aa17.43■□□□□ 0.38
HOXD1-201ENST00000331462 SMKR1H3BMG3 65 aa17.43■□□□□ 0.38
HOXD1-201ENST00000331462 TMEM97Q5BJF2 176 aa17.43■□□□□ 0.38
HOXD1-201ENST00000331462 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.43■□□□□ 0.38
HOXD1-201ENST00000331462 UBE2E1P51965 193 aa17.42■□□□□ 0.38
HOXD1-201ENST00000331462 FOXE3Q13461 319 aa17.42■□□□□ 0.38
HOXD1-201ENST00000331462 MAP1LC3AQ9H492 121 aa17.42■□□□□ 0.38
HOXD1-201ENST00000331462 SIVA1O15304 175 aa17.42■□□□□ 0.38
HOXD1-201ENST00000331462 ORM1P02763 201 aa17.42■□□□□ 0.38
HOXD1-201ENST00000331462 UCNP55089 124 aa17.42■□□□□ 0.38
HOXD1-201ENST00000331462 OR9G4Q8NGQ1 327 aa17.42■□□□□ 0.38
HOXD1-201ENST00000331462 TACC2O95359 2948 aa17.42■□□□□ 0.38
HOXD1-201ENST00000331462 CLPSL1A2RUU4 121 aa17.41■□□□□ 0.38
HOXD1-201ENST00000331462 NDUFS7O75251 213 aa17.41■□□□□ 0.38
HOXD1-201ENST00000331462 PIFOQ8TCI5 191 aa17.41■□□□□ 0.38
HOXD1-201ENST00000331462 MRPL53Q96EL3 112 aaKnown RBP17.41■□□□□ 0.38
HOXD1-201ENST00000331462 PEF1Q9UBV8 284 aaKnown RBP17.41■□□□□ 0.38
HOXD1-201ENST00000331462 DCHS2Q6V1P9 2916 aa17.41■□□□□ 0.38
HOXD1-201ENST00000331462 PRAC2D3DTV9 90 aa17.4■□□□□ 0.38
HOXD1-201ENST00000331462 SMAD7O15105 426 aaKnown RBP17.4■□□□□ 0.38
HOXD1-201ENST00000331462 PSMG4Q5JS54 123 aa17.4■□□□□ 0.38
HOXD1-201ENST00000331462 CEP295Q9C0D2 2601 aa17.4■□□□□ 0.38
HOXD1-201ENST00000331462 ATP6V0E1O15342 81 aa17.4■□□□□ 0.38
HOXD1-201ENST00000331462 GOSR1O95249 250 aa17.4■□□□□ 0.38
HOXD1-201ENST00000331462 PRSS57Q6UWY2 283 aa17.4■□□□□ 0.38
HOXD1-201ENST00000331462 CCDC140Q96MF4 163 aa17.4■□□□□ 0.38
HOXD1-201ENST00000331462 NXT2Q9NPJ8 142 aaKnown RBP17.4■□□□□ 0.38
HOXD1-201ENST00000331462 MSRB1Q9NZV6 116 aa17.4■□□□□ 0.38
HOXD1-201ENST00000331462 CLEC3BP05452 202 aa17.39■□□□□ 0.37
HOXD1-201ENST00000331462 ERCC8Q13216 396 aa17.39■□□□□ 0.37
HOXD1-201ENST00000331462 IGHV3OR16-8A0A075B7F1 116 aa17.39■□□□□ 0.37
HOXD1-201ENST00000331462 CBY3A6NI87 242 aa17.39■□□□□ 0.37
HOXD1-201ENST00000331462 ECSCRQ19T08 205 aa17.39■□□□□ 0.37
HOXD1-201ENST00000331462 IGHV3-35A0A0C4DH35 117 aa17.38■□□□□ 0.37
HOXD1-201ENST00000331462 CDKN1BP46527 198 aa17.38■□□□□ 0.37
HOXD1-201ENST00000331462 ERASQ7Z444 233 aa17.38■□□□□ 0.37
HOXD1-201ENST00000331462 C7orf71A4D174 169 aa17.37■□□□□ 0.37
HOXD1-201ENST00000331462 SNAI2O43623 268 aa17.37■□□□□ 0.37
HOXD1-201ENST00000331462 FXYD7P58549 80 aa17.37■□□□□ 0.37
HOXD1-201ENST00000331462 HSD52Q0P140 79 aa17.37■□□□□ 0.37
HOXD1-201ENST00000331462 AMMECR1LQ6DCA0 310 aa17.37■□□□□ 0.37
HOXD1-201ENST00000331462 IL17RELQ6ZVW7 336 aa17.37■□□□□ 0.37
HOXD1-201ENST00000331462 TNFRSF6BO95407 300 aa17.37■□□□□ 0.37
HOXD1-201ENST00000331462 FCER1GP30273 86 aa17.37■□□□□ 0.37
HOXD1-201ENST00000331462 HIF1ANQ9NWT6 349 aa17.37■□□□□ 0.37
HOXD1-201ENST00000331462 HRNRQ86YZ3 2850 aaPredicted RBP17.36■□□□□ 0.37
HOXD1-201ENST00000331462 RNF182Q8N6D2 247 aa17.36■□□□□ 0.37
HOXD1-201ENST00000331462 OR4X2Q8NGF9 303 aa17.36■□□□□ 0.37
HOXD1-201ENST00000331462 LRBAP50851 2863 aa17.36■□□□□ 0.37
HOXD1-201ENST00000331462 TRBV7-1A0A0A6YYK4 115 aa17.35■□□□□ 0.37
HOXD1-201ENST00000331462 TRAV8-6A0A0B4J262 113 aa17.35■□□□□ 0.37
HOXD1-201ENST00000331462 A0A1W2PPR1 153 aa17.35■□□□□ 0.37
HOXD1-201ENST00000331462 A1L4Q6 167 aa17.35■□□□□ 0.37
HOXD1-201ENST00000331462 EEF1AKMT3Q96AZ1 226 aa17.35■□□□□ 0.37
HOXD1-201ENST00000331462 ATP6V0BQ99437 205 aa17.35■□□□□ 0.37
HOXD1-201ENST00000331462 ZMAT4Q9H898 229 aa17.35■□□□□ 0.37
HOXD1-201ENST00000331462 U3KQE9 123 aa17.35■□□□□ 0.37
HOXD1-201ENST00000331462 TRAV8-2A0A0B4J237 113 aa17.35■□□□□ 0.37
HOXD1-201ENST00000331462 IGKV3D-20A0A0C4DH25 116 aa17.35■□□□□ 0.37
HOXD1-201ENST00000331462 SAA4P35542 130 aa17.35■□□□□ 0.37
HOXD1-201ENST00000331462 ADAMTSL5Q6ZMM2 481 aa17.35■□□□□ 0.37
HOXD1-201ENST00000331462 AGPAT4-IT1Q9H0P7 198 aa17.35■□□□□ 0.37
HOXD1-201ENST00000331462 A6NDN8 102 aa17.34■□□□□ 0.37
HOXD1-201ENST00000331462 H3BRM9 83 aa17.33■□□□□ 0.37
HOXD1-201ENST00000331462 CLEC19AQ6UXS0 136 aa17.33■□□□□ 0.37
HOXD1-201ENST00000331462 CENPVL3A0A0U1RRI6 287 aa17.33■□□□□ 0.36
HOXD1-201ENST00000331462 PRSS47A8MTI9 375 aa17.33■□□□□ 0.36
HOXD1-201ENST00000331462 GAS8-AS1O95177 125 aa17.33■□□□□ 0.36
HOXD1-201ENST00000331462 LEPP41159 167 aa17.33■□□□□ 0.36
HOXD1-201ENST00000331462 METTL26Q96S19 204 aa17.33■□□□□ 0.36
HOXD1-201ENST00000331462 C11orf21Q9P2W6 132 aa17.33■□□□□ 0.36
HOXD1-201ENST00000331462 DKK2Q9UBU2 259 aa17.33■□□□□ 0.36
HOXD1-201ENST00000331462 SPTA1P02549 2419 aa17.32■□□□□ 0.36
HOXD1-201ENST00000331462 IGLV2-18A0A075B6J9 118 aa17.32■□□□□ 0.36
HOXD1-201ENST00000331462 ODF1Q14990 250 aa17.32■□□□□ 0.36
HOXD1-201ENST00000331462 C9orf47Q6ZRZ4 202 aa17.32■□□□□ 0.36
HOXD1-201ENST00000331462 Q8N8P6 123 aa17.32■□□□□ 0.36
HOXD1-201ENST00000331462 IGHV4-4A0A075B6R2 117 aa17.31■□□□□ 0.36
HOXD1-201ENST00000331462 EFNA4P52798 201 aa17.31■□□□□ 0.36
HOXD1-201ENST00000331462 TMEM78Q5T7P6 136 aa17.31■□□□□ 0.36
HOXD1-201ENST00000331462 G3V318 75 aa17.31■□□□□ 0.36
HOXD1-201ENST00000331462 C8orf86Q6ZUL3 223 aa17.31■□□□□ 0.36
HOXD1-201ENST00000331462 CST9LQ9H4G1 147 aa17.31■□□□□ 0.36
HOXD1-201ENST00000331462 IGHV7-4-1A0A0J9YVY3 117 aa17.3■□□□□ 0.36
HOXD1-201ENST00000331462 C9orf118A6NHY6 69 aa17.3■□□□□ 0.36
HOXD1-201ENST00000331462 PCP4P48539 62 aa17.3■□□□□ 0.36
HOXD1-201ENST00000331462 LMO4P61968 165 aa17.3■□□□□ 0.36
HOXD1-201ENST00000331462 C5orf56Q8N8D9 126 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms