RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 DEFB1P60022 68 aa12.39□□□□□ -0.43
PDGFB-201ENST00000331163 KLHL30-AS1Q8NEE0 82 aa12.39□□□□□ -0.43
PDGFB-201ENST00000331163 ZNF48Q96MX3 618 aaPredicted RBP12.39□□□□□ -0.43
PDGFB-201ENST00000331163 LY6G6DO95868 133 aa12.38□□□□□ -0.43
PDGFB-201ENST00000331163 IGLL1P15814 213 aa12.38□□□□□ -0.43
PDGFB-201ENST00000331163 TM4SF20Q53R12 229 aa12.38□□□□□ -0.43
PDGFB-201ENST00000331163 TMEM136Q6ZRR5 245 aa12.38□□□□□ -0.43
PDGFB-201ENST00000331163 NIT1Q86X76 327 aa12.38□□□□□ -0.43
PDGFB-201ENST00000331163 Q8N976 141 aa12.38□□□□□ -0.43
PDGFB-201ENST00000331163 SLC25A39Q9BZJ4 359 aaPredicted RBP12.38□□□□□ -0.43
PDGFB-201ENST00000331163 WDR73Q6P4I2 378 aa12.38□□□□□ -0.43
PDGFB-201ENST00000331163 NPBQ8NG41 125 aa12.38□□□□□ -0.43
PDGFB-201ENST00000331163 NAA38Q9BRA0 125 aaKnown RBP12.38□□□□□ -0.43
PDGFB-201ENST00000331163 Q0VG73 95 aa12.38□□□□□ -0.43
PDGFB-201ENST00000331163 C16orf92Q96LL3 132 aa12.38□□□□□ -0.43
PDGFB-201ENST00000331163 TMEM167BQ9NRX6 74 aa12.38□□□□□ -0.43
PDGFB-201ENST00000331163 HLA-DMBP28068 263 aa12.37□□□□□ -0.43
PDGFB-201ENST00000331163 RNF182Q8N6D2 247 aa12.37□□□□□ -0.43
PDGFB-201ENST00000331163 ORAOV1Q8WV07 137 aa12.37□□□□□ -0.43
PDGFB-201ENST00000331163 GNB1LQ9BYB4 327 aa12.37□□□□□ -0.43
PDGFB-201ENST00000331163 NBEAL1Q6ZS30 2694 aa12.37□□□□□ -0.43
PDGFB-201ENST00000331163 NOTCH1P46531 2555 aa12.37□□□□□ -0.43
PDGFB-201ENST00000331163 NDUFA3O95167 84 aa12.36□□□□□ -0.43
PDGFB-201ENST00000331163 FSTL3O95633 263 aa12.36□□□□□ -0.43
PDGFB-201ENST00000331163 CTRLP40313 264 aa12.36□□□□□ -0.43
PDGFB-201ENST00000331163 RAB9AP51151 201 aa12.36□□□□□ -0.43
PDGFB-201ENST00000331163 RIPPLY3P57055 190 aa12.36□□□□□ -0.43
PDGFB-201ENST00000331163 I3L2K1 104 aa12.36□□□□□ -0.43
PDGFB-201ENST00000331163 AMMECR1LQ6DCA0 310 aa12.36□□□□□ -0.43
PDGFB-201ENST00000331163 PIFOQ8TCI5 191 aa12.36□□□□□ -0.43
PDGFB-201ENST00000331163 J3QLI3 93 aa12.35□□□□□ -0.43
PDGFB-201ENST00000331163 PATE2Q6UY27 113 aa12.35□□□□□ -0.43
PDGFB-201ENST00000331163 EBLN2Q6P2I7 272 aa12.35□□□□□ -0.43
PDGFB-201ENST00000331163 HLA-DQA1P01909 254 aa12.35□□□□□ -0.43
PDGFB-201ENST00000331163 ZNF138P52744 262 aa12.35□□□□□ -0.43
PDGFB-201ENST00000331163 ANKRD39Q53RE8 183 aa12.35□□□□□ -0.43
PDGFB-201ENST00000331163 Q8TAT8 98 aa12.35□□□□□ -0.43
PDGFB-201ENST00000331163 FAM110DQ8TAY7 271 aaPredicted RBP12.35□□□□□ -0.43
PDGFB-201ENST00000331163 C18orf32Q8TCD1 76 aa12.35□□□□□ -0.43
PDGFB-201ENST00000331163 DYNLRB2Q8TF09 96 aa12.35□□□□□ -0.43
PDGFB-201ENST00000331163 DNAJC9-AS1A6NH13 148 aa12.34□□□□□ -0.43
PDGFB-201ENST00000331163 MT-ND6P03923 174 aa12.34□□□□□ -0.43
PDGFB-201ENST00000331163 CRYGBP07316 175 aa12.34□□□□□ -0.43
PDGFB-201ENST00000331163 FAM106AQ4KMX7 169 aa12.34□□□□□ -0.43
PDGFB-201ENST00000331163 C18orf65Q6ZTR6 163 aa12.34□□□□□ -0.43
PDGFB-201ENST00000331163 LSM4Q9Y4Z0 139 aaKnown RBP12.34□□□□□ -0.43
PDGFB-201ENST00000331163 OR4C46A6NHA9 309 aa12.34□□□□□ -0.43
PDGFB-201ENST00000331163 LINC00173Q6ZV60 143 aa12.34□□□□□ -0.43
PDGFB-201ENST00000331163 Q9H3A6 140 aa12.34□□□□□ -0.43
PDGFB-201ENST00000331163 A6NDX4 124 aa12.34□□□□□ -0.43
PDGFB-201ENST00000331163 MRPL52Q86TS9 123 aaKnown RBP12.34□□□□□ -0.43
PDGFB-201ENST00000331163 TRAV9-2A0A087WT02 112 aa12.33□□□□□ -0.44
PDGFB-201ENST00000331163 A0A0G2JLM5 398 aa12.33□□□□□ -0.44
PDGFB-201ENST00000331163 APOHP02749 345 aaPredicted RBP12.33□□□□□ -0.44
PDGFB-201ENST00000331163 MRGPRG-AS1Q2M3A8 158 aa12.33□□□□□ -0.44
PDGFB-201ENST00000331163 C8orf86Q6ZUL3 223 aa12.33□□□□□ -0.44
PDGFB-201ENST00000331163 IGLV11-55A0A075B6I3 123 aa12.33□□□□□ -0.44
PDGFB-201ENST00000331163 TRAV30A0A087WSZ9 112 aa12.33□□□□□ -0.44
PDGFB-201ENST00000331163 IGKV2-40A0A087WW87 121 aaPredicted RBP12.33□□□□□ -0.44
PDGFB-201ENST00000331163 HSBP1L1C9JCN9 74 aa12.33□□□□□ -0.44
PDGFB-201ENST00000331163 IGKV2D-40P01614 121 aaPredicted RBP12.33□□□□□ -0.44
PDGFB-201ENST00000331163 CTSGP08311 255 aa12.33□□□□□ -0.44
PDGFB-201ENST00000331163 UNQ9165/PRO28630Q6UXU0 137 aa12.33□□□□□ -0.44
PDGFB-201ENST00000331163 TCF24Q7RTU0 167 aa12.32□□□□□ -0.44
PDGFB-201ENST00000331163 TMEM116Q8NCL8 245 aa12.32□□□□□ -0.44
PDGFB-201ENST00000331163 IGKV1D-37A0A075B6S9 117 aa12.32□□□□□ -0.44
PDGFB-201ENST00000331163 IGHV3OR16-12A0A075B7B8 117 aa12.32□□□□□ -0.44
PDGFB-201ENST00000331163 GGTLC3B5MD39 225 aa12.32□□□□□ -0.44
PDGFB-201ENST00000331163 OR10J3Q5JRS4 329 aa12.32□□□□□ -0.44
PDGFB-201ENST00000331163 ZNF491Q8N8L2 437 aa12.32□□□□□ -0.44
PDGFB-201ENST00000331163 A0A087X0K7 114 aa12.32□□□□□ -0.44
PDGFB-201ENST00000331163 EGR2P11161 476 aaPredicted RBP12.32□□□□□ -0.44
PDGFB-201ENST00000331163 PRR20EP86478 221 aa12.32□□□□□ -0.44
PDGFB-201ENST00000331163 PRR20CP86479 221 aa12.32□□□□□ -0.44
PDGFB-201ENST00000331163 PRR20DP86480 221 aa12.32□□□□□ -0.44
PDGFB-201ENST00000331163 PRR20BP86481 221 aa12.32□□□□□ -0.44
PDGFB-201ENST00000331163 PRR20AP86496 221 aa12.32□□□□□ -0.44
PDGFB-201ENST00000331163 LRRC75A-AS1Q8N1F1 130 aa12.32□□□□□ -0.44
PDGFB-201ENST00000331163 OR11H1Q8NG94 326 aa12.32□□□□□ -0.44
PDGFB-201ENST00000331163 TRGV9Q99603 122 aa12.32□□□□□ -0.44
PDGFB-201ENST00000331163 ZNF688P0C7X2 276 aa12.31□□□□□ -0.44
PDGFB-201ENST00000331163 VWC2Q2TAL6 325 aa12.31□□□□□ -0.44
PDGFB-201ENST00000331163 TTC9CQ8N5M4 171 aa12.31□□□□□ -0.44
PDGFB-201ENST00000331163 TRBV9A0A0B4J1U6 114 aa12.31□□□□□ -0.44
PDGFB-201ENST00000331163 ATP5IP56385 69 aaPredicted RBP12.31□□□□□ -0.44
PDGFB-201ENST00000331163 TXNDC17Q9BRA2 123 aa12.31□□□□□ -0.44
PDGFB-201ENST00000331163 PRSS46E5RG02 174 aa12.31□□□□□ -0.44
PDGFB-201ENST00000331163 K7EQM0 130 aa12.31□□□□□ -0.44
PDGFB-201ENST00000331163 CT45A10P0DMU9 189 aa12.31□□□□□ -0.44
PDGFB-201ENST00000331163 ESDP10768 282 aa12.31□□□□□ -0.44
PDGFB-201ENST00000331163 SLURP1P55000 103 aa12.31□□□□□ -0.44
PDGFB-201ENST00000331163 EDN2P20800 178 aa12.3□□□□□ -0.44
PDGFB-201ENST00000331163 CST9LQ9H4G1 147 aa12.3□□□□□ -0.44
PDGFB-201ENST00000331163 HIGD1CA8MV81 97 aa12.3□□□□□ -0.44
PDGFB-201ENST00000331163 RPL7P18124 248 aaKnown RBP12.3□□□□□ -0.44
PDGFB-201ENST00000331163 CDKN1BP46527 198 aa12.3□□□□□ -0.44
PDGFB-201ENST00000331163 AJUBAQ96IF1 538 aa12.3□□□□□ -0.44
PDGFB-201ENST00000331163 NPIPB5A8MRT5 1133 aa12.3□□□□□ -0.44
PDGFB-201ENST00000331163 PF4P02776 101 aa12.3□□□□□ -0.44
PDGFB-201ENST00000331163 HIST1H1AQ02539 215 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms