RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 PRSS1P07477 247 aa11.3□□□□□ -0.6
SNX20-202ENST00000330943 PPIAL4GP0DN37 164 aa11.3□□□□□ -0.6
SNX20-202ENST00000330943 ODF1Q14990 250 aa11.3□□□□□ -0.6
SNX20-202ENST00000330943 SAMD13Q5VXD3 122 aa11.3□□□□□ -0.6
SNX20-202ENST00000330943 PRR25Q96S07 402 aa11.3□□□□□ -0.6
SNX20-202ENST00000330943 DYNLRB1Q9NP97 96 aa11.3□□□□□ -0.6
SNX20-202ENST00000330943 KAAG1Q9UBP8 84 aa11.3□□□□□ -0.6
SNX20-202ENST00000330943 K7EMI3 77 aa11.3□□□□□ -0.6
SNX20-202ENST00000330943 CEACAM4O75871 244 aa11.3□□□□□ -0.6
SNX20-202ENST00000330943 ZNF80P51504 273 aaPredicted RBP11.3□□□□□ -0.6
SNX20-202ENST00000330943 PDE6HQ13956 83 aa11.3□□□□□ -0.6
SNX20-202ENST00000330943 NHP2Q9NX24 153 aaKnown RBP11.3□□□□□ -0.6
SNX20-202ENST00000330943 EVI2AP22794 236 aa11.29□□□□□ -0.6
SNX20-202ENST00000330943 HHLA3Q9XRX5 114 aa11.29□□□□□ -0.6
SNX20-202ENST00000330943 C16orf97H3BN30 126 aa11.29□□□□□ -0.6
SNX20-202ENST00000330943 CEACAM3P40198 252 aa11.29□□□□□ -0.6
SNX20-202ENST00000330943 ZNF562Q6V9R5 426 aa11.29□□□□□ -0.6
SNX20-202ENST00000330943 GTSCR1Q86UQ5 136 aa11.29□□□□□ -0.6
SNX20-202ENST00000330943 ZFHX3Q15911 3703 aa11.29□□□□□ -0.6
SNX20-202ENST00000330943 IGFL4Q6B9Z1 124 aa11.29□□□□□ -0.6
SNX20-202ENST00000330943 RNASE6Q93091 150 aaKnown RBP11.29□□□□□ -0.6
SNX20-202ENST00000330943 HIGD1BQ9P298 99 aa11.29□□□□□ -0.6
SNX20-202ENST00000330943 ZFYVE26Q68DK2 2539 aa11.28□□□□□ -0.6
SNX20-202ENST00000330943 CIDEAO60543 219 aa11.28□□□□□ -0.6
SNX20-202ENST00000330943 RNF185Q96GF1 192 aa11.28□□□□□ -0.6
SNX20-202ENST00000330943 FOXC2Q99958 501 aa11.28□□□□□ -0.6
SNX20-202ENST00000330943 VGLL1Q99990 258 aa11.28□□□□□ -0.6
SNX20-202ENST00000330943 TRBV25-1A0A075B6N4 114 aa11.28□□□□□ -0.6
SNX20-202ENST00000330943 IGKCP01834 107 aa11.28□□□□□ -0.6
SNX20-202ENST00000330943 ORM1P02763 201 aa11.28□□□□□ -0.6
SNX20-202ENST00000330943 IGLC6P0CF74 106 aa11.28□□□□□ -0.6
SNX20-202ENST00000330943 PRR30Q53SZ7 412 aaPredicted RBP11.28□□□□□ -0.6
SNX20-202ENST00000330943 GFRALQ6UXV0 394 aa11.28□□□□□ -0.6
SNX20-202ENST00000330943 GTSF1LQ9H1H1 148 aa11.28□□□□□ -0.6
SNX20-202ENST00000330943 THBDP07204 575 aa11.27□□□□□ -0.6
SNX20-202ENST00000330943 FCER1GP30273 86 aa11.27□□□□□ -0.6
SNX20-202ENST00000330943 PIFOQ8TCI5 191 aa11.27□□□□□ -0.6
SNX20-202ENST00000330943 IGFBPL1Q8WX77 278 aa11.27□□□□□ -0.6
SNX20-202ENST00000330943 CHTOPQ9Y3Y2 248 aaKnown RBP11.27□□□□□ -0.6
SNX20-202ENST00000330943 TIMM23O14925 209 aa11.27□□□□□ -0.61
SNX20-202ENST00000330943 GATA1P15976 413 aaPredicted RBP11.27□□□□□ -0.61
SNX20-202ENST00000330943 ZC2HC1BQ5TFG8 222 aa11.27□□□□□ -0.61
SNX20-202ENST00000330943 ZMAT4Q9H898 229 aa11.27□□□□□ -0.61
SNX20-202ENST00000330943 CRYBG3Q68DQ2 2970 aa11.27□□□□□ -0.61
SNX20-202ENST00000330943 TNFRSF6BO95407 300 aa11.26□□□□□ -0.61
SNX20-202ENST00000330943 HLA-DMBP28068 263 aa11.26□□□□□ -0.61
SNX20-202ENST00000330943 BMI1P35226 326 aa11.26□□□□□ -0.61
SNX20-202ENST00000330943 FOXC1Q12948 553 aa11.26□□□□□ -0.61
SNX20-202ENST00000330943 S100A7AQ86SG5 101 aa11.26□□□□□ -0.61
SNX20-202ENST00000330943 PHLDA1Q8WV24 401 aaPredicted RBP11.26□□□□□ -0.61
SNX20-202ENST00000330943 RAB1BQ9H0U4 201 aa11.26□□□□□ -0.61
SNX20-202ENST00000330943 ARHGAP32A7KAX9 2087 aa11.26□□□□□ -0.61
SNX20-202ENST00000330943 AZU1P20160 251 aa11.26□□□□□ -0.61
SNX20-202ENST00000330943 TMEM158Q8WZ71 300 aa11.26□□□□□ -0.61
SNX20-202ENST00000330943 SRSF8Q9BRL6 282 aaKnown RBP11.26□□□□□ -0.61
SNX20-202ENST00000330943 HRNRQ86YZ3 2850 aaPredicted RBP11.26□□□□□ -0.61
SNX20-202ENST00000330943 LYNX1G3V0Z9 82 aa11.25□□□□□ -0.61
SNX20-202ENST00000330943 LYNX1P0DP58 116 aa11.25□□□□□ -0.61
SNX20-202ENST00000330943 PPIFP30405 207 aaKnown RBP11.25□□□□□ -0.61
SNX20-202ENST00000330943 CEND1Q8N111 149 aa11.25□□□□□ -0.61
SNX20-202ENST00000330943 NXT2Q9NPJ8 142 aaKnown RBP11.25□□□□□ -0.61
SNX20-202ENST00000330943 SHISA9B4DS77 424 aa11.25□□□□□ -0.61
SNX20-202ENST00000330943 ZNF207O43670 478 aaKnown RBP11.25□□□□□ -0.61
SNX20-202ENST00000330943 DPM2O94777 84 aa11.25□□□□□ -0.61
SNX20-202ENST00000330943 IGHV3-23P01764 117 aa11.25□□□□□ -0.61
SNX20-202ENST00000330943 SMAGPQ0VAQ4 97 aa11.25□□□□□ -0.61
SNX20-202ENST00000330943 PIEZO1Q92508 2521 aa11.25□□□□□ -0.61
SNX20-202ENST00000330943 A0A0G2JNJ9 132 aa11.25□□□□□ -0.61
SNX20-202ENST00000330943 TMEM8BA6NDV4 472 aa11.25□□□□□ -0.61
SNX20-202ENST00000330943 COX8CQ7Z4L0 72 aa11.25□□□□□ -0.61
SNX20-202ENST00000330943 ZNF575Q86XF7 245 aa11.25□□□□□ -0.61
SNX20-202ENST00000330943 FAM57AQ8TBR7 257 aa11.25□□□□□ -0.61
SNX20-202ENST00000330943 TMEM160Q9NX00 188 aa11.25□□□□□ -0.61
SNX20-202ENST00000330943 Q9UFV3 132 aa11.25□□□□□ -0.61
SNX20-202ENST00000330943 PSMG4Q5JS54 123 aa11.24□□□□□ -0.61
SNX20-202ENST00000330943 TSSC4Q9Y5U2 329 aaPredicted RBP11.24□□□□□ -0.61
SNX20-202ENST00000330943 VSTM5A8MXK1 200 aa11.24□□□□□ -0.61
SNX20-202ENST00000330943 RPL7P18124 248 aaKnown RBP11.24□□□□□ -0.61
SNX20-202ENST00000330943 MFAP4P55083 255 aa11.24□□□□□ -0.61
SNX20-202ENST00000330943 WFDC2Q14508 124 aa11.24□□□□□ -0.61
SNX20-202ENST00000330943 CACNA1AO00555 2505 aa11.24□□□□□ -0.61
SNX20-202ENST00000330943 ITPR1Q14643 2758 aa11.24□□□□□ -0.61
SNX20-202ENST00000330943 IGHV3OR16-8A0A075B7F1 116 aa11.23□□□□□ -0.61
SNX20-202ENST00000330943 NBR2O15453 112 aa11.23□□□□□ -0.61
SNX20-202ENST00000330943 Q6ZS92 163 aa11.23□□□□□ -0.61
SNX20-202ENST00000330943 SIGMAR1Q99720 223 aa11.23□□□□□ -0.61
SNX20-202ENST00000330943 TM2D2Q9BX73 214 aa11.23□□□□□ -0.61
SNX20-202ENST00000330943 TRAV40A0A0B4J280 105 aa11.23□□□□□ -0.61
SNX20-202ENST00000330943 LINC01546A6NGU7 62 aa11.23□□□□□ -0.61
SNX20-202ENST00000330943 RNF5Q99942 180 aa11.23□□□□□ -0.61
SNX20-202ENST00000330943 ZNF479Q96JC4 524 aa11.22□□□□□ -0.61
SNX20-202ENST00000330943 FANCD2OSQ96PS1 177 aa11.22□□□□□ -0.61
SNX20-202ENST00000330943 ONECUT1Q9UBC0 465 aa11.22□□□□□ -0.61
SNX20-202ENST00000330943 UTP20O75691 2785 aaKnown RBP11.22□□□□□ -0.61
SNX20-202ENST00000330943 HIVEP3Q5T1R4 2406 aa11.22□□□□□ -0.61
SNX20-202ENST00000330943 IGLL5B9A064 214 aa11.22□□□□□ -0.61
SNX20-202ENST00000330943 F8W735 103 aaPredicted RBP11.22□□□□□ -0.61
SNX20-202ENST00000330943 ATP5LO75964 103 aa11.22□□□□□ -0.61
SNX20-202ENST00000330943 ERCC8Q13216 396 aa11.22□□□□□ -0.61
SNX20-202ENST00000330943 MRPL35Q9NZE8 188 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms