RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 NDUFB8O95169 186 aa11.22□□□□□ -0.61
EPHB3-201ENST00000330394 ZNF883P0CG24 379 aa11.22□□□□□ -0.61
EPHB3-201ENST00000330394 KLF5Q13887 457 aaPredicted RBP11.22□□□□□ -0.61
EPHB3-201ENST00000330394 CUL9Q8IWT3 2517 aa11.22□□□□□ -0.61
EPHB3-201ENST00000330394 EML5Q05BV3 1969 aa11.22□□□□□ -0.61
EPHB3-201ENST00000330394 H7C1H1 209 aa11.22□□□□□ -0.61
EPHB3-201ENST00000330394 CIRBPQ14011 172 aaKnown RBP11.22□□□□□ -0.61
EPHB3-201ENST00000330394 NDUFS7O75251 213 aa11.22□□□□□ -0.61
EPHB3-201ENST00000330394 CD59P13987 128 aa11.22□□□□□ -0.61
EPHB3-201ENST00000330394 BRWD1-AS2P59051 145 aa11.22□□□□□ -0.61
EPHB3-201ENST00000330394 ERG28Q9UKR5 140 aa11.22□□□□□ -0.61
EPHB3-201ENST00000330394 PPP1R17O96001 155 aa11.21□□□□□ -0.61
EPHB3-201ENST00000330394 TMEM155Q4W5P6 130 aa11.21□□□□□ -0.61
EPHB3-201ENST00000330394 WIPF2Q8TF74 440 aaPredicted RBP11.21□□□□□ -0.61
EPHB3-201ENST00000330394 HCFC1P51610 2035 aa11.21□□□□□ -0.61
EPHB3-201ENST00000330394 SONP18583 2426 aaKnown RBP11.21□□□□□ -0.61
EPHB3-201ENST00000330394 BUB1B-PAK6H3BSN5 160 aa11.21□□□□□ -0.61
EPHB3-201ENST00000330394 PROP1O75360 226 aa11.21□□□□□ -0.61
EPHB3-201ENST00000330394 FAM106AQ4KMX7 169 aa11.21□□□□□ -0.61
EPHB3-201ENST00000330394 GTSF1Q8WW33 167 aa11.21□□□□□ -0.61
EPHB3-201ENST00000330394 VGLL1Q99990 258 aa11.21□□□□□ -0.61
EPHB3-201ENST00000330394 SRSF8Q9BRL6 282 aaKnown RBP11.21□□□□□ -0.61
EPHB3-201ENST00000330394 TRAV21A0A0B4J279 112 aa11.21□□□□□ -0.62
EPHB3-201ENST00000330394 C9JAW5 83 aa11.21□□□□□ -0.62
EPHB3-201ENST00000330394 PLNP26678 52 aa11.21□□□□□ -0.62
EPHB3-201ENST00000330394 TLN1Q9Y490 2541 aaKnown RBP11.21□□□□□ -0.62
EPHB3-201ENST00000330394 GATA1P15976 413 aaPredicted RBP11.2□□□□□ -0.62
EPHB3-201ENST00000330394 KRTAP27-1Q3LI81 207 aa11.2□□□□□ -0.62
EPHB3-201ENST00000330394 PAPPA-AS1Q5QFB9 102 aa11.2□□□□□ -0.62
EPHB3-201ENST00000330394 CLEC2AQ6UVW9 174 aa11.2□□□□□ -0.62
EPHB3-201ENST00000330394 LYPD1Q8N2G4 141 aa11.2□□□□□ -0.62
EPHB3-201ENST00000330394 IGFBPL1Q8WX77 278 aa11.2□□□□□ -0.62
EPHB3-201ENST00000330394 TMEM262E9PQX1 116 aa11.2□□□□□ -0.62
EPHB3-201ENST00000330394 ZNF562Q6V9R5 426 aa11.2□□□□□ -0.62
EPHB3-201ENST00000330394 DDB2Q92466 427 aa11.2□□□□□ -0.62
EPHB3-201ENST00000330394 FAM167A-AS1Q96KT0 104 aa11.2□□□□□ -0.62
EPHB3-201ENST00000330394 C5orf64Q2M2E5 130 aa11.2□□□□□ -0.62
EPHB3-201ENST00000330394 C19orf54Q5BKX5 351 aa11.2□□□□□ -0.62
EPHB3-201ENST00000330394 C2orf70A6NJV1 201 aa11.2□□□□□ -0.62
EPHB3-201ENST00000330394 HLA-DMBP28068 263 aa11.2□□□□□ -0.62
EPHB3-201ENST00000330394 TMEM219Q86XT9 240 aa11.2□□□□□ -0.62
EPHB3-201ENST00000330394 SPRY2O43597 315 aa11.19□□□□□ -0.62
EPHB3-201ENST00000330394 IGLC1P0CG04 106 aa11.19□□□□□ -0.62
EPHB3-201ENST00000330394 C3orf36Q3SXR2 165 aa11.19□□□□□ -0.62
EPHB3-201ENST00000330394 IGF2BP2-AS1Q96M15 143 aa11.19□□□□□ -0.62
EPHB3-201ENST00000330394 PRR25Q96S07 402 aa11.19□□□□□ -0.62
EPHB3-201ENST00000330394 SLC25A16P16260 332 aa11.19□□□□□ -0.62
EPHB3-201ENST00000330394 MRPL36Q9P0J6 103 aaKnown RBP11.19□□□□□ -0.62
EPHB3-201ENST00000330394 TNFRSF18Q9Y5U5 241 aa11.19□□□□□ -0.62
EPHB3-201ENST00000330394 ZNF672Q499Z4 452 aaPredicted RBP11.19□□□□□ -0.62
EPHB3-201ENST00000330394 PRSS46E5RG02 174 aa11.18□□□□□ -0.62
EPHB3-201ENST00000330394 LTAP01374 205 aa11.18□□□□□ -0.62
EPHB3-201ENST00000330394 ZNF833PQ6ZTB9 187 aa11.18□□□□□ -0.62
EPHB3-201ENST00000330394 DYNLRB2Q8TF09 96 aa11.18□□□□□ -0.62
EPHB3-201ENST00000330394 TNFRSF14Q92956 283 aa11.18□□□□□ -0.62
EPHB3-201ENST00000330394 SCRT2Q9NQ03 307 aa11.18□□□□□ -0.62
EPHB3-201ENST00000330394 E7EUB6 86 aa11.18□□□□□ -0.62
EPHB3-201ENST00000330394 POU2AF1Q16633 256 aa11.18□□□□□ -0.62
EPHB3-201ENST00000330394 UTF1Q5T230 341 aa11.18□□□□□ -0.62
EPHB3-201ENST00000330394 MSRB1Q9NZV6 116 aa11.18□□□□□ -0.62
EPHB3-201ENST00000330394 PRUNE2Q8WUY3 3088 aa11.18□□□□□ -0.62
EPHB3-201ENST00000330394 NEGR1Q7Z3B1 354 aa11.18□□□□□ -0.62
EPHB3-201ENST00000330394 A0A087WWL8 130 aa11.17□□□□□ -0.62
EPHB3-201ENST00000330394 IL17RELQ6ZVW7 336 aa11.17□□□□□ -0.62
EPHB3-201ENST00000330394 OR13C6PQ8NH95 151 aa11.17□□□□□ -0.62
EPHB3-201ENST00000330394 ZNF503Q96F45 646 aa11.17□□□□□ -0.62
EPHB3-201ENST00000330394 DNAL4O96015 105 aa11.17□□□□□ -0.62
EPHB3-201ENST00000330394 IGHG3P01860 377 aa11.17□□□□□ -0.62
EPHB3-201ENST00000330394 WFDC2Q14508 124 aa11.17□□□□□ -0.62
EPHB3-201ENST00000330394 ANXA2RQ3ZCQ2 193 aa11.17□□□□□ -0.62
EPHB3-201ENST00000330394 GDF5OSQ5U4N7 250 aa11.17□□□□□ -0.62
EPHB3-201ENST00000330394 TOMM7Q9P0U1 55 aa11.17□□□□□ -0.62
EPHB3-201ENST00000330394 MUC6Q6W4X9 2439 aa11.17□□□□□ -0.62
EPHB3-201ENST00000330394 SETD2Q9BYW2 2564 aaPredicted RBP11.17□□□□□ -0.62
EPHB3-201ENST00000330394 FXYD2P54710 66 aa11.17□□□□□ -0.62
EPHB3-201ENST00000330394 RBX1P62877 108 aa11.17□□□□□ -0.62
EPHB3-201ENST00000330394 TRAV8-4A0A0B4J246 113 aa11.17□□□□□ -0.62
EPHB3-201ENST00000330394 LINC01545Q5VT33 79 aa11.17□□□□□ -0.62
EPHB3-201ENST00000330394 ATP6V0BQ99437 205 aa11.17□□□□□ -0.62
EPHB3-201ENST00000330394 TNRC6AQ8NDV7 1962 aaKnown RBP11.17□□□□□ -0.62
EPHB3-201ENST00000330394 SNRPD3P62318 126 aaKnown RBP11.16□□□□□ -0.62
EPHB3-201ENST00000330394 NEU4Q8WWR8 484 aaPredicted RBP11.16□□□□□ -0.62
EPHB3-201ENST00000330394 IGHV3-73A0A0B4J1V6 119 aa11.16□□□□□ -0.62
EPHB3-201ENST00000330394 C22orf46C9J442 243 aa11.16□□□□□ -0.62
EPHB3-201ENST00000330394 C2orf66Q6UXQ4 117 aa11.16□□□□□ -0.62
EPHB3-201ENST00000330394 SIGLEC15Q6ZMC9 328 aa11.16□□□□□ -0.62
EPHB3-201ENST00000330394 DTX2Q86UW9 622 aa11.16□□□□□ -0.62
EPHB3-201ENST00000330394 TRBV25-1A0A075B6N4 114 aa11.15□□□□□ -0.62
EPHB3-201ENST00000330394 F8W1H4 67 aa11.15□□□□□ -0.62
EPHB3-201ENST00000330394 PAX8Q06710 450 aa11.15□□□□□ -0.62
EPHB3-201ENST00000330394 MBD3L4A6NDZ8 208 aaPredicted RBP11.15□□□□□ -0.62
EPHB3-201ENST00000330394 MBD3L3A6NE82 208 aaPredicted RBP11.15□□□□□ -0.62
EPHB3-201ENST00000330394 MBD3L5A6NJ08 208 aaPredicted RBP11.15□□□□□ -0.62
EPHB3-201ENST00000330394 LOXP28300 417 aaPredicted RBP11.15□□□□□ -0.62
EPHB3-201ENST00000330394 MBD3L2Q8NHZ7 208 aaPredicted RBP11.15□□□□□ -0.62
EPHB3-201ENST00000330394 P0C879 139 aa11.15□□□□□ -0.62
EPHB3-201ENST00000330394 EGR2P11161 476 aaPredicted RBP11.15□□□□□ -0.62
EPHB3-201ENST00000330394 C12orf74Q32Q52 190 aa11.15□□□□□ -0.62
EPHB3-201ENST00000330394 LINC01559Q495D7 138 aa11.15□□□□□ -0.62
EPHB3-201ENST00000330394 LINC00322Q6ZN03 302 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms