RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 A0A087X0K7 114 aa11.95□□□□□ -0.5
BRCC3-201ENST00000330045 ZNF80P51504 273 aaPredicted RBP11.95□□□□□ -0.5
BRCC3-201ENST00000330045 FER1L6-AS1Q8NA97 138 aa11.95□□□□□ -0.5
BRCC3-201ENST00000330045 MYO18BQ8IUG5 2567 aa11.95□□□□□ -0.5
BRCC3-201ENST00000330045 IGHV7-81A0A0B4J1V7 117 aa11.94□□□□□ -0.5
BRCC3-201ENST00000330045 IGHG4P01861 327 aa11.94□□□□□ -0.5
BRCC3-201ENST00000330045 HLA-DMBP28068 263 aa11.94□□□□□ -0.5
BRCC3-201ENST00000330045 TWIST1Q15672 202 aa11.94□□□□□ -0.5
BRCC3-201ENST00000330045 MINOS1Q5TGZ0 78 aa11.94□□□□□ -0.5
BRCC3-201ENST00000330045 MINOS1-NBL1R4GNA1 71 aa11.94□□□□□ -0.5
BRCC3-201ENST00000330045 MAP1AP78559 2803 aaPredicted RBP11.94□□□□□ -0.5
BRCC3-201ENST00000330045 PRB1P04280 392 aa11.94□□□□□ -0.5
BRCC3-201ENST00000330045 GPR183P32249 361 aa11.94□□□□□ -0.5
BRCC3-201ENST00000330045 IGHV3OR16-8A0A075B7F1 116 aa11.93□□□□□ -0.5
BRCC3-201ENST00000330045 IGHV3-35A0A0C4DH35 117 aa11.93□□□□□ -0.5
BRCC3-201ENST00000330045 CKS2P33552 79 aa11.93□□□□□ -0.5
BRCC3-201ENST00000330045 OR4C5Q8NGB2 326 aa11.93□□□□□ -0.5
BRCC3-201ENST00000330045 MED13LQ71F56 2210 aa11.93□□□□□ -0.5
BRCC3-201ENST00000330045 S100A7P31151 101 aa11.93□□□□□ -0.5
BRCC3-201ENST00000330045 ERASQ7Z444 233 aa11.93□□□□□ -0.5
BRCC3-201ENST00000330045 ZNF462Q96JM2 2506 aa11.92□□□□□ -0.5
BRCC3-201ENST00000330045 IGLC6P0CF74 106 aa11.92□□□□□ -0.5
BRCC3-201ENST00000330045 ZFP36P26651 326 aaKnown RBP11.92□□□□□ -0.5
BRCC3-201ENST00000330045 LGALS9BQ3B8N2 356 aa11.92□□□□□ -0.5
BRCC3-201ENST00000330045 LGALS9CQ6DKI2 356 aa11.92□□□□□ -0.5
BRCC3-201ENST00000330045 Q8N9W7 124 aa11.92□□□□□ -0.5
BRCC3-201ENST00000330045 SMKR1H3BMG3 65 aa11.92□□□□□ -0.5
BRCC3-201ENST00000330045 SNAI2O43623 268 aa11.92□□□□□ -0.5
BRCC3-201ENST00000330045 HBDP02042 147 aa11.92□□□□□ -0.5
BRCC3-201ENST00000330045 FXYD7P58549 80 aa11.92□□□□□ -0.5
BRCC3-201ENST00000330045 RHOGP84095 191 aa11.92□□□□□ -0.5
BRCC3-201ENST00000330045 C2orf91Q6ZV80 131 aa11.92□□□□□ -0.5
BRCC3-201ENST00000330045 PIP4P2Q8N4L2 257 aa11.92□□□□□ -0.5
BRCC3-201ENST00000330045 DPF1Q92782 380 aa11.92□□□□□ -0.5
BRCC3-201ENST00000330045 CD5LO43866 347 aa11.91□□□□□ -0.5
BRCC3-201ENST00000330045 NDUFS7O75251 213 aa11.91□□□□□ -0.5
BRCC3-201ENST00000330045 NPYP01303 97 aa11.91□□□□□ -0.5
BRCC3-201ENST00000330045 PAX8Q06710 450 aa11.91□□□□□ -0.5
BRCC3-201ENST00000330045 ZNF575Q86XF7 245 aa11.91□□□□□ -0.5
BRCC3-201ENST00000330045 RNASE8Q8TDE3 154 aaKnown RBP11.91□□□□□ -0.5
BRCC3-201ENST00000330045 K7EP13 123 aa11.91□□□□□ -0.5
BRCC3-201ENST00000330045 ORM1P02763 201 aa11.91□□□□□ -0.5
BRCC3-201ENST00000330045 SRSF2Q01130 221 aaKnown RBP11.91□□□□□ -0.5
BRCC3-201ENST00000330045 CBY3A6NI87 242 aa11.9□□□□□ -0.5
BRCC3-201ENST00000330045 FABP5P3A8MUU1 101 aa11.9□□□□□ -0.5
BRCC3-201ENST00000330045 CACNG7P62955 275 aa11.9□□□□□ -0.5
BRCC3-201ENST00000330045 FOXE3Q13461 319 aa11.9□□□□□ -0.5
BRCC3-201ENST00000330045 C15orf32Q32M92 178 aa11.9□□□□□ -0.5
BRCC3-201ENST00000330045 ANKRD39Q53RE8 183 aa11.9□□□□□ -0.5
BRCC3-201ENST00000330045 ZFHX3Q15911 3703 aa11.9□□□□□ -0.5
BRCC3-201ENST00000330045 FAM110DQ8TAY7 271 aaPredicted RBP11.89□□□□□ -0.51
BRCC3-201ENST00000330045 BBC3Q96PG8 261 aaPredicted RBP11.89□□□□□ -0.51
BRCC3-201ENST00000330045 SIRPDQ9H106 197 aa11.89□□□□□ -0.51
BRCC3-201ENST00000330045 TMEM8BA6NDV4 472 aa11.89□□□□□ -0.51
BRCC3-201ENST00000330045 ERCC8Q13216 396 aa11.89□□□□□ -0.51
BRCC3-201ENST00000330045 OR1N2Q8NGR9 330 aa11.89□□□□□ -0.51
BRCC3-201ENST00000330045 ZNF502Q8TBZ5 544 aa11.89□□□□□ -0.51
BRCC3-201ENST00000330045 MSRB1Q9NZV6 116 aa11.89□□□□□ -0.51
BRCC3-201ENST00000330045 CELSR2Q9HCU4 2923 aa11.89□□□□□ -0.51
BRCC3-201ENST00000330045 CLEC3BP05452 202 aa11.88□□□□□ -0.51
BRCC3-201ENST00000330045 FGF6P10767 208 aa11.88□□□□□ -0.51
BRCC3-201ENST00000330045 ECSCRQ19T08 205 aa11.88□□□□□ -0.51
BRCC3-201ENST00000330045 IFI27L1Q96BM0 104 aa11.88□□□□□ -0.51
BRCC3-201ENST00000330045 BUB3O43684 328 aa11.88□□□□□ -0.51
BRCC3-201ENST00000330045 RAB9AP51151 201 aa11.88□□□□□ -0.51
BRCC3-201ENST00000330045 DTX2Q86UW9 622 aa11.88□□□□□ -0.51
BRCC3-201ENST00000330045 CNFNQ9BYD5 112 aa11.88□□□□□ -0.51
BRCC3-201ENST00000330045 ZFAND3Q9H8U3 227 aa11.88□□□□□ -0.51
BRCC3-201ENST00000330045 CELSR1Q9NYQ6 3014 aa11.88□□□□□ -0.51
BRCC3-201ENST00000330045 PRAC2D3DTV9 90 aa11.87□□□□□ -0.51
BRCC3-201ENST00000330045 RNF185Q96GF1 192 aa11.87□□□□□ -0.51
BRCC3-201ENST00000330045 TMEM97Q5BJF2 176 aa11.87□□□□□ -0.51
BRCC3-201ENST00000330045 PRSS57Q6UWY2 283 aa11.87□□□□□ -0.51
BRCC3-201ENST00000330045 PSMG3-AS1Q96PY0 264 aa11.87□□□□□ -0.51
BRCC3-201ENST00000330045 DOPEY1Q5JWR5 2465 aa11.87□□□□□ -0.51
BRCC3-201ENST00000330045 ATP6V0E1O15342 81 aa11.86□□□□□ -0.51
BRCC3-201ENST00000330045 GOSR1O95249 250 aa11.86□□□□□ -0.51
BRCC3-201ENST00000330045 PPBPP02775 128 aa11.86□□□□□ -0.51
BRCC3-201ENST00000330045 AMMECR1LQ6DCA0 310 aa11.86□□□□□ -0.51
BRCC3-201ENST00000330045 RNF182Q8N6D2 247 aa11.86□□□□□ -0.51
BRCC3-201ENST00000330045 MAP1LC3AQ9H492 121 aa11.86□□□□□ -0.51
BRCC3-201ENST00000330045 LINC01559Q495D7 138 aa11.86□□□□□ -0.51
BRCC3-201ENST00000330045 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.86□□□□□ -0.51
BRCC3-201ENST00000330045 UBTD1Q9HAC8 227 aa11.86□□□□□ -0.51
BRCC3-201ENST00000330045 SPG11Q96JI7 2443 aa11.86□□□□□ -0.51
BRCC3-201ENST00000330045 WNK2Q9Y3S1 2297 aa11.86□□□□□ -0.51
BRCC3-201ENST00000330045 IGHV3-66A0A0C4DH42 116 aa11.85□□□□□ -0.51
BRCC3-201ENST00000330045 RBAKDNA6NC62 111 aa11.85□□□□□ -0.51
BRCC3-201ENST00000330045 UBE2E1P51965 193 aa11.85□□□□□ -0.51
BRCC3-201ENST00000330045 RBX1P62877 108 aa11.85□□□□□ -0.51
BRCC3-201ENST00000330045 SEC11AP67812 179 aa11.85□□□□□ -0.51
BRCC3-201ENST00000330045 BOD1L2Q8IYS8 172 aa11.85□□□□□ -0.51
BRCC3-201ENST00000330045 SLC50A1Q9BRV3 221 aa11.85□□□□□ -0.51
BRCC3-201ENST00000330045 NPFFR1Q9GZQ6 430 aa11.85□□□□□ -0.51
BRCC3-201ENST00000330045 KLK9Q2XQG4 91 aa11.85□□□□□ -0.51
BRCC3-201ENST00000330045 IL17RELQ6ZVW7 336 aa11.85□□□□□ -0.51
BRCC3-201ENST00000330045 AJUBAQ96IF1 538 aa11.85□□□□□ -0.51
BRCC3-201ENST00000330045 PEF1Q9UBV8 284 aaKnown RBP11.85□□□□□ -0.51
BRCC3-201ENST00000330045 KLK9Q9UKQ9 250 aa11.85□□□□□ -0.51
BRCC3-201ENST00000330045 CENPEQ02224 2701 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms