RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 C1orf122Q6ZSJ8 110 aa12.59□□□□□ -0.39
SYNM-201ENST00000328642 REC114Q7Z4M0 266 aa12.59□□□□□ -0.39
SYNM-201ENST00000328642 ORMDL3Q8N138 153 aa12.59□□□□□ -0.39
SYNM-201ENST00000328642 FLNCQ14315 2725 aa12.59□□□□□ -0.39
SYNM-201ENST00000328642 EMP1P54849 157 aa12.59□□□□□ -0.39
SYNM-201ENST00000328642 TMEM249Q2WGJ8 235 aa12.59□□□□□ -0.39
SYNM-201ENST00000328642 DEFB136Q30KP8 78 aa12.59□□□□□ -0.39
SYNM-201ENST00000328642 ZNF664Q8N3J9 261 aa12.59□□□□□ -0.39
SYNM-201ENST00000328642 IGHV3-73A0A0B4J1V6 119 aa12.58□□□□□ -0.4
SYNM-201ENST00000328642 DGAT2L7PQ6IED9 249 aa12.58□□□□□ -0.4
SYNM-201ENST00000328642 Q8N9W7 124 aa12.58□□□□□ -0.4
SYNM-201ENST00000328642 PSMB11A5LHX3 300 aa12.58□□□□□ -0.4
SYNM-201ENST00000328642 THAP8Q8NA92 274 aa12.58□□□□□ -0.4
SYNM-201ENST00000328642 IGKV1D-37A0A075B6S9 117 aa12.58□□□□□ -0.4
SYNM-201ENST00000328642 FBXL19-AS1Q494R0 122 aa12.58□□□□□ -0.4
SYNM-201ENST00000328642 FBLL1A6NHQ2 334 aaKnown RBP12.57□□□□□ -0.4
SYNM-201ENST00000328642 C3orf79P0CE67 100 aa12.57□□□□□ -0.4
SYNM-201ENST00000328642 TRAV8-6A0A0B4J262 113 aa12.57□□□□□ -0.4
SYNM-201ENST00000328642 SCGB1D4Q6XE38 83 aa12.57□□□□□ -0.4
SYNM-201ENST00000328642 FAM110DQ8TAY7 271 aaPredicted RBP12.57□□□□□ -0.4
SYNM-201ENST00000328642 LINC00477Q96M19 166 aa12.57□□□□□ -0.4
SYNM-201ENST00000328642 LMO4P61968 165 aa12.56□□□□□ -0.4
SYNM-201ENST00000328642 LINC01356Q8N9X3 169 aa12.56□□□□□ -0.4
SYNM-201ENST00000328642 SLC50A1Q9BRV3 221 aa12.56□□□□□ -0.4
SYNM-201ENST00000328642 IGKV3OR2-268A0A0C4DH90 116 aa12.55□□□□□ -0.4
SYNM-201ENST00000328642 CTSGP08311 255 aa12.55□□□□□ -0.4
SYNM-201ENST00000328642 ASIPP42127 132 aa12.55□□□□□ -0.4
SYNM-201ENST00000328642 NSUN5P1Q3KNT7 163 aa12.55□□□□□ -0.4
SYNM-201ENST00000328642 hDV102S1A0JD36 115 aa12.55□□□□□ -0.4
SYNM-201ENST00000328642 PRSS46E5RG02 174 aa12.55□□□□□ -0.4
SYNM-201ENST00000328642 RPS20P60866 119 aaKnown RBP12.55□□□□□ -0.4
SYNM-201ENST00000328642 C14orf178Q8N769 122 aaPredicted RBP12.55□□□□□ -0.4
SYNM-201ENST00000328642 TRAV12-2A0A075B6T6 113 aa12.55□□□□□ -0.4
SYNM-201ENST00000328642 C11orf52Q96A22 123 aa12.55□□□□□ -0.4
SYNM-201ENST00000328642 ZNF414Q96IQ9 312 aa12.54□□□□□ -0.4
SYNM-201ENST00000328642 FANCD2OSQ96PS1 177 aa12.54□□□□□ -0.4
SYNM-201ENST00000328642 PRDM13Q9H4Q3 707 aa12.54□□□□□ -0.4
SYNM-201ENST00000328642 TNRC6BQ9UPQ9 1833 aaKnown RBP12.54□□□□□ -0.4
SYNM-201ENST00000328642 H3BRN7 92 aa12.54□□□□□ -0.4
SYNM-201ENST00000328642 TRBV12-3P01733 135 aa12.54□□□□□ -0.4
SYNM-201ENST00000328642 YPEL3P61236 119 aaPredicted RBP12.54□□□□□ -0.4
SYNM-201ENST00000328642 DTX2Q86UW9 622 aa12.54□□□□□ -0.4
SYNM-201ENST00000328642 C18orf32Q8TCD1 76 aa12.54□□□□□ -0.4
SYNM-201ENST00000328642 M0QZK8 103 aa12.54□□□□□ -0.4
SYNM-201ENST00000328642 CACNG7P62955 275 aa12.54□□□□□ -0.4
SYNM-201ENST00000328642 FOXC2Q99958 501 aa12.54□□□□□ -0.4
SYNM-201ENST00000328642 IFI27P40305 119 aaPredicted RBP12.54□□□□□ -0.4
SYNM-201ENST00000328642 RIPPLY3P57055 190 aa12.54□□□□□ -0.4
SYNM-201ENST00000328642 UQCR10Q9UDW1 63 aa12.54□□□□□ -0.4
SYNM-201ENST00000328642 PRAC2D3DTV9 90 aa12.53□□□□□ -0.4
SYNM-201ENST00000328642 LEPP41159 167 aa12.53□□□□□ -0.4
SYNM-201ENST00000328642 C8orf86Q6ZUL3 223 aa12.53□□□□□ -0.4
SYNM-201ENST00000328642 ARL6IP6Q8N6S5 226 aa12.53□□□□□ -0.4
SYNM-201ENST00000328642 TRAV9-1A0A075B6T8 112 aa12.53□□□□□ -0.4
SYNM-201ENST00000328642 TRBV7-1A0A0A6YYK4 115 aa12.53□□□□□ -0.4
SYNM-201ENST00000328642 FAM181BA6NEQ2 426 aa12.53□□□□□ -0.4
SYNM-201ENST00000328642 HOXA3O43365 443 aaPredicted RBP12.53□□□□□ -0.4
SYNM-201ENST00000328642 TRAV26-2A0A0B4J265 109 aa12.53□□□□□ -0.4
SYNM-201ENST00000328642 GP9P14770 177 aa12.53□□□□□ -0.4
SYNM-201ENST00000328642 A0A087WWL8 130 aa12.52□□□□□ -0.4
SYNM-201ENST00000328642 Q6ZWC4 215 aa12.52□□□□□ -0.4
SYNM-201ENST00000328642 KLHL30-AS1Q8NEE0 82 aa12.52□□□□□ -0.4
SYNM-201ENST00000328642 C1orf159Q96HA4 380 aa12.52□□□□□ -0.4
SYNM-201ENST00000328642 PRR25Q96S07 402 aa12.52□□□□□ -0.41
SYNM-201ENST00000328642 IGLV11-55A0A075B6I3 123 aa12.52□□□□□ -0.41
SYNM-201ENST00000328642 C8orf31Q8N9H6 132 aa12.52□□□□□ -0.41
SYNM-201ENST00000328642 UBE2E2Q96LR5 201 aa12.52□□□□□ -0.41
SYNM-201ENST00000328642 PRORYQ9H606 182 aa12.52□□□□□ -0.41
SYNM-201ENST00000328642 MSRB1Q9NZV6 116 aa12.52□□□□□ -0.41
SYNM-201ENST00000328642 PEF1Q9UBV8 284 aaKnown RBP12.52□□□□□ -0.41
SYNM-201ENST00000328642 LY96Q9Y6Y9 160 aa12.52□□□□□ -0.41
SYNM-201ENST00000328642 GCSHP23434 173 aa12.51□□□□□ -0.41
SYNM-201ENST00000328642 SLC25A34Q6PIV7 304 aa12.51□□□□□ -0.41
SYNM-201ENST00000328642 LINC00322Q6ZN03 302 aaPredicted RBP12.51□□□□□ -0.41
SYNM-201ENST00000328642 C10orf105Q8TEF2 133 aa12.51□□□□□ -0.41
SYNM-201ENST00000328642 USP24Q9UPU5 2620 aa12.51□□□□□ -0.41
SYNM-201ENST00000328642 TDRG1Q3Y452 100 aa12.51□□□□□ -0.41
SYNM-201ENST00000328642 KNCNA6PVL3 124 aa12.51□□□□□ -0.41
SYNM-201ENST00000328642 TCF21O43680 179 aa12.51□□□□□ -0.41
SYNM-201ENST00000328642 PCP4P48539 62 aa12.51□□□□□ -0.41
SYNM-201ENST00000328642 SPINK13Q1W4C9 94 aa12.51□□□□□ -0.41
SYNM-201ENST00000328642 OR4C5Q8NGB2 326 aa12.51□□□□□ -0.41
SYNM-201ENST00000328642 VPS25Q9BRG1 176 aa12.51□□□□□ -0.41
SYNM-201ENST00000328642 LINC00574Q9H8X3 128 aa12.51□□□□□ -0.41
SYNM-201ENST00000328642 NDUFA3O95167 84 aa12.5□□□□□ -0.41
SYNM-201ENST00000328642 LINC01587Q99440 93 aa12.5□□□□□ -0.41
SYNM-201ENST00000328642 SIRPDQ9H106 197 aa12.5□□□□□ -0.41
SYNM-201ENST00000328642 PTPRBP23467 1997 aa12.5□□□□□ -0.41
SYNM-201ENST00000328642 RAI1Q7Z5J4 1906 aaPredicted RBP12.5□□□□□ -0.41
SYNM-201ENST00000328642 RPLP1P05386 114 aaKnown RBP12.5□□□□□ -0.41
SYNM-201ENST00000328642 ZNF124Q15973 351 aa12.5□□□□□ -0.41
SYNM-201ENST00000328642 MAJINQ3KP22 176 aa12.5□□□□□ -0.41
SYNM-201ENST00000328642 FOXE3Q13461 319 aa12.5□□□□□ -0.41
SYNM-201ENST00000328642 TTC9CQ8N5M4 171 aa12.5□□□□□ -0.41
SYNM-201ENST00000328642 CBY1Q9Y3M2 126 aa12.5□□□□□ -0.41
SYNM-201ENST00000328642 SRSF9Q13242 221 aaKnown RBP eCLIP12.49□□□□□ -0.41
SYNM-201ENST00000328642 PRSS57Q6UWY2 283 aa12.49□□□□□ -0.41
SYNM-201ENST00000328642 WIPF2Q8TF74 440 aaPredicted RBP12.49□□□□□ -0.41
SYNM-201ENST00000328642 NAA38Q9BRA0 125 aaKnown RBP12.49□□□□□ -0.41
SYNM-201ENST00000328642 KLK9Q9UKQ9 250 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms