RNA–Protein interactions for RNA: ENST00000321337.11

SENP3-201, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SENP3, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-201ENST00000321337 GCSHP23434 173 aa19.66■□□□□ 0.74
SENP3-201ENST00000321337 NEGR1Q7Z3B1 354 aa19.66■□□□□ 0.74
SENP3-201ENST00000321337 HHLA3Q9XRX5 114 aa19.66■□□□□ 0.74
SENP3-201ENST00000321337 SRSF8Q9BRL6 282 aaKnown RBP19.66■□□□□ 0.74
SENP3-201ENST00000321337 PRR30Q53SZ7 412 aaPredicted RBP19.65■□□□□ 0.74
SENP3-201ENST00000321337 PRAC2D3DTV9 90 aa19.65■□□□□ 0.74
SENP3-201ENST00000321337 MFAP4P55083 255 aa19.65■□□□□ 0.74
SENP3-201ENST00000321337 ODF1Q14990 250 aa19.65■□□□□ 0.74
SENP3-201ENST00000321337 RNF5Q99942 180 aa19.65■□□□□ 0.74
SENP3-201ENST00000321337 ZNF562Q6V9R5 426 aa19.64■□□□□ 0.73
SENP3-201ENST00000321337 NPFFR1Q9GZQ6 430 aa19.64■□□□□ 0.73
SENP3-201ENST00000321337 RAB1BQ9H0U4 201 aa19.64■□□□□ 0.73
SENP3-201ENST00000321337 COX8CQ7Z4L0 72 aa19.63■□□□□ 0.73
SENP3-201ENST00000321337 GTSCR1Q86UQ5 136 aa19.63■□□□□ 0.73
SENP3-201ENST00000321337 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.63■□□□□ 0.73
SENP3-201ENST00000321337 C21orf62Q9NYP8 219 aa19.63■□□□□ 0.73
SENP3-201ENST00000321337 DYNAPQ8N1N2 210 aa19.62■□□□□ 0.73
SENP3-201ENST00000321337 COL25A1Q9BXS0 654 aaPredicted RBP19.62■□□□□ 0.73
SENP3-201ENST00000321337 MAP1LC3AQ9H492 121 aa19.62■□□□□ 0.73
SENP3-201ENST00000321337 TNFRSF6BO95407 300 aa19.62■□□□□ 0.73
SENP3-201ENST00000321337 ABCA4P78363 2273 aa19.62■□□□□ 0.73
SENP3-201ENST00000321337 TMEM238C9JI98 176 aa19.61■□□□□ 0.73
SENP3-201ENST00000321337 C5orf64Q2M2E5 130 aa19.61■□□□□ 0.73
SENP3-201ENST00000321337 SAMD5Q5TGI4 173 aa19.61■□□□□ 0.73
SENP3-201ENST00000321337 WNK2Q9Y3S1 2297 aa19.61■□□□□ 0.73
SENP3-201ENST00000321337 NDUFA3O95167 84 aa19.61■□□□□ 0.73
SENP3-201ENST00000321337 PRSS1P07477 247 aa19.61■□□□□ 0.73
SENP3-201ENST00000321337 Q8NA96 180 aa19.61■□□□□ 0.73
SENP3-201ENST00000321337 LINC01560Q8TB33 94 aa19.61■□□□□ 0.73
SENP3-201ENST00000321337 DPM3Q9P2X0 92 aa19.61■□□□□ 0.73
SENP3-201ENST00000321337 IGF2-ASQ6U949 168 aa19.6■□□□□ 0.73
SENP3-201ENST00000321337 RNF182Q8N6D2 247 aa19.6■□□□□ 0.73
SENP3-201ENST00000321337 RPL7P18124 248 aaKnown RBP19.6■□□□□ 0.73
SENP3-201ENST00000321337 NPBQ8NG41 125 aa19.6■□□□□ 0.73
SENP3-201ENST00000321337 FOXC2Q99958 501 aa19.6■□□□□ 0.73
SENP3-201ENST00000321337 ZMAT4Q9H898 229 aa19.6■□□□□ 0.73
SENP3-201ENST00000321337 ASH1LQ9NR48 2969 aaKnown RBP19.59■□□□□ 0.73
SENP3-201ENST00000321337 B9A039 149 aa19.59■□□□□ 0.73
SENP3-201ENST00000321337 CTSGP08311 255 aa19.59■□□□□ 0.73
SENP3-201ENST00000321337 FCER1GP30273 86 aa19.59■□□□□ 0.73
SENP3-201ENST00000321337 TMEM190Q8WZ59 177 aa19.59■□□□□ 0.73
SENP3-201ENST00000321337 TMEM158Q8WZ71 300 aa19.59■□□□□ 0.73
SENP3-201ENST00000321337 CHAC1Q9BUX1 264 aa19.59■□□□□ 0.73
SENP3-201ENST00000321337 NCBP2LA6PVI3 153 aaKnown RBP19.58■□□□□ 0.73
SENP3-201ENST00000321337 SMIM13P0DJ93 91 aa19.58■□□□□ 0.73
SENP3-201ENST00000321337 BMI1P35226 326 aa19.58■□□□□ 0.73
SENP3-201ENST00000321337 IGHV3-66A0A0C4DH42 116 aa19.58■□□□□ 0.72
SENP3-201ENST00000321337 FABP2P12104 132 aa19.58■□□□□ 0.72
SENP3-201ENST00000321337 ARPC1AQ92747 370 aa19.58■□□□□ 0.72
SENP3-201ENST00000321337 SPTBN2O15020 2390 aa19.58■□□□□ 0.72
SENP3-201ENST00000321337 TRGV3P03979 118 aa19.57■□□□□ 0.72
SENP3-201ENST00000321337 Q6ZQT7 251 aa19.57■□□□□ 0.72
SENP3-201ENST00000321337 ZNF672Q499Z4 452 aaPredicted RBP19.57■□□□□ 0.72
SENP3-201ENST00000321337 IL17RELQ6ZVW7 336 aa19.57■□□□□ 0.72
SENP3-201ENST00000321337 TRBV25-1A0A075B6N4 114 aa19.56■□□□□ 0.72
SENP3-201ENST00000321337 C11orf21Q9P2W6 132 aa19.56■□□□□ 0.72
SENP3-201ENST00000321337 CD3EP07766 207 aa19.56■□□□□ 0.72
SENP3-201ENST00000321337 ZC2HC1BQ5TFG8 222 aa19.56■□□□□ 0.72
SENP3-201ENST00000321337 DTX2Q86UW9 622 aa19.56■□□□□ 0.72
SENP3-201ENST00000321337 OR5A1Q8NGJ0 315 aa19.56■□□□□ 0.72
SENP3-201ENST00000321337 IGHV3OR16-13A0A075B7E8 117 aa19.55■□□□□ 0.72
SENP3-201ENST00000321337 IGHV3-74A0A0B4J1X5 117 aa19.55■□□□□ 0.72
SENP3-201ENST00000321337 TRAV26-2A0A0B4J265 109 aa19.55■□□□□ 0.72
SENP3-201ENST00000321337 FBLL1A6NHQ2 334 aaKnown RBP19.55■□□□□ 0.72
SENP3-201ENST00000321337 IGKCP01834 107 aa19.55■□□□□ 0.72
SENP3-201ENST00000321337 MAPKAPK5-AS1Q8N8E1 139 aa19.55■□□□□ 0.72
SENP3-201ENST00000321337 LY6G5BQ8NDX9 201 aa19.55■□□□□ 0.72
SENP3-201ENST00000321337 PHLDA1Q8WV24 401 aaPredicted RBP19.55■□□□□ 0.72
SENP3-201ENST00000321337 TMEM8BA6NDV4 472 aa19.55■□□□□ 0.72
SENP3-201ENST00000321337 GRNP28799 593 aaKnown RBP19.55■□□□□ 0.72
SENP3-201ENST00000321337 ZNF292O60281 2723 aa19.55■□□□□ 0.72
SENP3-201ENST00000321337 LINC01546A6NGU7 62 aa19.55■□□□□ 0.72
SENP3-201ENST00000321337 RPL24P83731 157 aaKnown RBP19.55■□□□□ 0.72
SENP3-201ENST00000321337 TMEM160Q9NX00 188 aa19.55■□□□□ 0.72
SENP3-201ENST00000321337 NHP2Q9NX24 153 aaKnown RBP19.55■□□□□ 0.72
SENP3-201ENST00000321337 CACNA1BQ00975 2339 aa19.54■□□□□ 0.72
SENP3-201ENST00000321337 TEX48A0A1B0GUV7 120 aa19.54■□□□□ 0.72
SENP3-201ENST00000321337 FABP5P3A8MUU1 101 aa19.54■□□□□ 0.72
SENP3-201ENST00000321337 CNFNQ9BYD5 112 aa19.54■□□□□ 0.72
SENP3-201ENST00000321337 TRAV40A0A0B4J280 105 aa19.54■□□□□ 0.72
SENP3-201ENST00000321337 IGKV3D-20A0A0C4DH25 116 aa19.54■□□□□ 0.72
SENP3-201ENST00000321337 ZNF207O43670 478 aaKnown RBP19.54■□□□□ 0.72
SENP3-201ENST00000321337 TTC9CQ8N5M4 171 aa19.54■□□□□ 0.72
SENP3-201ENST00000321337 OR11H6Q8NGC7 330 aa19.54■□□□□ 0.72
SENP3-201ENST00000321337 ZNF48Q96MX3 618 aaPredicted RBP19.54■□□□□ 0.72
SENP3-201ENST00000321337 MED13LQ71F56 2210 aa19.53■□□□□ 0.72
SENP3-201ENST00000321337 RIF1Q5UIP0 2472 aaKnown RBP19.53■□□□□ 0.72
SENP3-201ENST00000321337 GOSR1O95249 250 aa19.53■□□□□ 0.72
SENP3-201ENST00000321337 PIFOQ8TCI5 191 aa19.53■□□□□ 0.72
SENP3-201ENST00000321337 IGLV2-18A0A075B6J9 118 aa19.52■□□□□ 0.72
SENP3-201ENST00000321337 S100A7AQ86SG5 101 aa19.52■□□□□ 0.72
SENP3-201ENST00000321337 MRPL35Q9NZE8 188 aaKnown RBP19.52■□□□□ 0.71
SENP3-201ENST00000321337 NXT2Q9NPJ8 142 aaKnown RBP19.51■□□□□ 0.71
SENP3-201ENST00000321337 HIGD1BQ9P298 99 aa19.51■□□□□ 0.71
SENP3-201ENST00000321337 ZFHX3Q15911 3703 aa19.5■□□□□ 0.71
SENP3-201ENST00000321337 SMIM17P0DL12 118 aa19.5■□□□□ 0.71
SENP3-201ENST00000321337 IGHV3-49A0A0A0MS15 119 aa19.5■□□□□ 0.71
SENP3-201ENST00000321337 LINC01559Q495D7 138 aa19.49■□□□□ 0.71
SENP3-201ENST00000321337 ODF3BA8MYP8 253 aa19.49■□□□□ 0.71
SENP3-201ENST00000321337 DPM2O94777 84 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms