RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 STXBP6Q8NFX7 210 aa7.53□□□□□ -1.2
RPGR-201ENST00000318842 FOXC2Q99958 501 aa7.53□□□□□ -1.2
RPGR-201ENST00000318842 OTORQ9NRC9 128 aa7.53□□□□□ -1.2
RPGR-201ENST00000318842 WI2-2373I1.2A0A1W2PRP0 233 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 I3L2K1 104 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 K7EP34 96 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 CRYGCP07315 174 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 NDPQ00604 133 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 RIGQ13278 110 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 TRGV9Q99603 122 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 MUC6Q6W4X9 2439 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 A0A0G2JNJ9 132 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 A0A1W2PPM0 123 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 NDUFA3O95167 84 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 SCGB1A1P11684 91 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 GATA4P43694 442 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 ZNF491Q8N8L2 437 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 RNF125Q96EQ8 232 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 NPFFR1Q9GZQ6 430 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 Q9UFV3 132 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 IGKV3-7A0A075B6H7 116 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 TRAV40A0A0B4J280 105 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 G3V4G9 280 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 PAX2Q02962 417 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 ETDBQ3ZM63 59 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 SAMD5Q5TGI4 173 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 ZNF575Q86XF7 245 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 ZNF492Q9P255 531 aa7.52□□□□□ -1.21
RPGR-201ENST00000318842 MBD3L4A6NDZ8 208 aaPredicted RBP7.51□□□□□ -1.21
RPGR-201ENST00000318842 MBD3L3A6NE82 208 aaPredicted RBP7.51□□□□□ -1.21
RPGR-201ENST00000318842 MBD3L5A6NJ08 208 aaPredicted RBP7.51□□□□□ -1.21
RPGR-201ENST00000318842 NCBP2LA6PVI3 153 aaKnown RBP7.51□□□□□ -1.21
RPGR-201ENST00000318842 IGF1P05019 195 aa7.51□□□□□ -1.21
RPGR-201ENST00000318842 CT45A10P0DMU9 189 aa7.51□□□□□ -1.21
RPGR-201ENST00000318842 ZC2HC1BQ5TFG8 222 aa7.51□□□□□ -1.21
RPGR-201ENST00000318842 FAM104BQ5XKR9 115 aa7.51□□□□□ -1.21
RPGR-201ENST00000318842 NEGR1Q7Z3B1 354 aa7.51□□□□□ -1.21
RPGR-201ENST00000318842 BOD1L2Q8IYS8 172 aa7.51□□□□□ -1.21
RPGR-201ENST00000318842 MBD3L2Q8NHZ7 208 aaPredicted RBP7.51□□□□□ -1.21
RPGR-201ENST00000318842 RPEQ96AT9 228 aa7.51□□□□□ -1.21
RPGR-201ENST00000318842 LINC00527Q9UJ94 153 aa7.51□□□□□ -1.21
RPGR-201ENST00000318842 UFC1Q9Y3C8 167 aa7.51□□□□□ -1.21
RPGR-201ENST00000318842 TSSC4Q9Y5U2 329 aaPredicted RBP7.51□□□□□ -1.21
RPGR-201ENST00000318842 ZANQ9Y493 2812 aa7.51□□□□□ -1.21
RPGR-201ENST00000318842 TM4SF5O14894 197 aa7.51□□□□□ -1.21
RPGR-201ENST00000318842 FTH1P19P0C7X4 201 aa7.51□□□□□ -1.21
RPGR-201ENST00000318842 AZU1P20160 251 aa7.51□□□□□ -1.21
RPGR-201ENST00000318842 TEX36Q5VZQ5 186 aa7.51□□□□□ -1.21
RPGR-201ENST00000318842 GFRALQ6UXV0 394 aa7.51□□□□□ -1.21
RPGR-201ENST00000318842 ORMDL3Q8N138 153 aa7.51□□□□□ -1.21
RPGR-201ENST00000318842 LINC01560Q8TB33 94 aa7.51□□□□□ -1.21
RPGR-201ENST00000318842 PRRG2O14669 202 aa7.5□□□□□ -1.21
RPGR-201ENST00000318842 DLX6P56179 175 aa7.5□□□□□ -1.21
RPGR-201ENST00000318842 JKAMPQ9P055 326 aa7.5□□□□□ -1.21
RPGR-201ENST00000318842 HBDP02042 147 aa7.5□□□□□ -1.21
RPGR-201ENST00000318842 IL17RELQ6ZVW7 336 aa7.5□□□□□ -1.21
RPGR-201ENST00000318842 TMEM158Q8WZ71 300 aa7.5□□□□□ -1.21
RPGR-201ENST00000318842 ZNF479Q96JC4 524 aa7.5□□□□□ -1.21
RPGR-201ENST00000318842 MS4A6AQ9H2W1 248 aa7.5□□□□□ -1.21
RPGR-201ENST00000318842 PTPRQQ9UMZ3 2332 aa7.5□□□□□ -1.21
RPGR-201ENST00000318842 SPTBN4Q9H254 2564 aa7.5□□□□□ -1.21
RPGR-201ENST00000318842 TMEM8BA6NDV4 472 aa7.49□□□□□ -1.21
RPGR-201ENST00000318842 TMEM155Q4W5P6 130 aa7.49□□□□□ -1.21
RPGR-201ENST00000318842 DYNAPQ8N1N2 210 aa7.49□□□□□ -1.21
RPGR-201ENST00000318842 SHANK2-AS3Q9BTD1 123 aa7.49□□□□□ -1.21
RPGR-201ENST00000318842 CHAC1Q9BUX1 264 aa7.49□□□□□ -1.21
RPGR-201ENST00000318842 C11orf21Q9P2W6 132 aa7.49□□□□□ -1.21
RPGR-201ENST00000318842 LINC00574Q9H8X3 128 aa7.49□□□□□ -1.21
RPGR-201ENST00000318842 A6NDN8 102 aa7.49□□□□□ -1.21
RPGR-201ENST00000318842 E7EQL1 145 aa7.49□□□□□ -1.21
RPGR-201ENST00000318842 H3BRM9 83 aa7.49□□□□□ -1.21
RPGR-201ENST00000318842 BUB1B-PAK6H3BSN5 160 aa7.49□□□□□ -1.21
RPGR-201ENST00000318842 GTF2H5Q6ZYL4 71 aa7.49□□□□□ -1.21
RPGR-201ENST00000318842 ATP6V0BQ99437 205 aa7.49□□□□□ -1.21
RPGR-201ENST00000318842 MRPL35Q9NZE8 188 aaKnown RBP7.49□□□□□ -1.21
RPGR-201ENST00000318842 TRBV25-1A0A075B6N4 114 aa7.48□□□□□ -1.21
RPGR-201ENST00000318842 CRYBA4P53673 196 aa7.48□□□□□ -1.21
RPGR-201ENST00000318842 CT83Q5H943 113 aa7.48□□□□□ -1.21
RPGR-201ENST00000318842 ZNF562Q6V9R5 426 aa7.48□□□□□ -1.21
RPGR-201ENST00000318842 PTH2Q96A98 100 aa7.48□□□□□ -1.21
RPGR-201ENST00000318842 GFRA4Q9GZZ7 299 aa7.48□□□□□ -1.21
RPGR-201ENST00000318842 CSPG4Q6UVK1 2322 aa7.48□□□□□ -1.21
RPGR-201ENST00000318842 H3BRN7 92 aa7.48□□□□□ -1.21
RPGR-201ENST00000318842 FABP2P12104 132 aa7.48□□□□□ -1.21
RPGR-201ENST00000318842 ODF1Q14990 250 aa7.48□□□□□ -1.21
RPGR-201ENST00000318842 CFHR4Q92496 578 aa7.48□□□□□ -1.21
RPGR-201ENST00000318842 RNASE6Q93091 150 aaKnown RBP7.48□□□□□ -1.21
RPGR-201ENST00000318842 RNF185Q96GF1 192 aa7.48□□□□□ -1.21
RPGR-201ENST00000318842 SCNM1Q9BWG6 230 aa7.48□□□□□ -1.21
RPGR-201ENST00000318842 SMAD5-AS1Q9Y6J3 95 aa7.48□□□□□ -1.21
RPGR-201ENST00000318842 IGHG4P01861 327 aa7.47□□□□□ -1.21
RPGR-201ENST00000318842 SEC11AP67812 179 aa7.47□□□□□ -1.21
RPGR-201ENST00000318842 HSD52Q0P140 79 aa7.47□□□□□ -1.21
RPGR-201ENST00000318842 RAB9BQ9NP90 201 aa7.47□□□□□ -1.21
RPGR-201ENST00000318842 HHLA3Q9XRX5 114 aa7.47□□□□□ -1.21
RPGR-201ENST00000318842 CRYGBP07316 175 aa7.47□□□□□ -1.21
RPGR-201ENST00000318842 PLA2G2CQ5R387 149 aa7.47□□□□□ -1.21
RPGR-201ENST00000318842 C2CD3Q4AC94 2353 aa7.47□□□□□ -1.21
RPGR-201ENST00000318842 SETD2Q9BYW2 2564 aaPredicted RBP7.47□□□□□ -1.21
RPGR-201ENST00000318842 TRAV26-1A0A087WT03 109 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms