RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 MC5RP33032 325 aa13.46□□□□□ -0.26
SCAMP4-201ENST00000316097 TM4SF20Q53R12 229 aa13.46□□□□□ -0.26
SCAMP4-201ENST00000316097 NEGR1Q7Z3B1 354 aa13.46□□□□□ -0.26
SCAMP4-201ENST00000316097 F11RQ9Y624 299 aaKnown RBP13.46□□□□□ -0.26
SCAMP4-201ENST00000316097 UBR5O95071 2799 aaPredicted RBP13.45□□□□□ -0.26
SCAMP4-201ENST00000316097 TRBV6-1A0A0K0K1D8 114 aa13.45□□□□□ -0.26
SCAMP4-201ENST00000316097 LGALS7P47929 136 aa13.45□□□□□ -0.26
SCAMP4-201ENST00000316097 ZNF414Q96IQ9 312 aa13.45□□□□□ -0.26
SCAMP4-201ENST00000316097 TRBV19A0A075B6N1 114 aa13.45□□□□□ -0.26
SCAMP4-201ENST00000316097 A0A1W2PPM0 123 aa13.45□□□□□ -0.26
SCAMP4-201ENST00000316097 RPEQ96AT9 228 aa13.45□□□□□ -0.26
SCAMP4-201ENST00000316097 RASL11BQ9BPW5 248 aa13.45□□□□□ -0.26
SCAMP4-201ENST00000316097 POLQO75417 2590 aa13.45□□□□□ -0.26
SCAMP4-201ENST00000316097 K7EQM0 130 aa13.44□□□□□ -0.26
SCAMP4-201ENST00000316097 PSG3Q16557 428 aa13.44□□□□□ -0.26
SCAMP4-201ENST00000316097 Q6AWC8 147 aa13.44□□□□□ -0.26
SCAMP4-201ENST00000316097 LYZL1Q6UWQ5 148 aa13.44□□□□□ -0.26
SCAMP4-201ENST00000316097 ZNF493Q6ZR52 646 aa13.44□□□□□ -0.26
SCAMP4-201ENST00000316097 OR4X2Q8NGF9 303 aa13.44□□□□□ -0.26
SCAMP4-201ENST00000316097 C8orf49Q96NF6 230 aa13.44□□□□□ -0.26
SCAMP4-201ENST00000316097 M0R3E3 92 aa13.44□□□□□ -0.26
SCAMP4-201ENST00000316097 HBDP02042 147 aa13.44□□□□□ -0.26
SCAMP4-201ENST00000316097 WFDC3Q8IUB2 231 aa13.44□□□□□ -0.26
SCAMP4-201ENST00000316097 ORMDL3Q8N138 153 aa13.44□□□□□ -0.26
SCAMP4-201ENST00000316097 SIGLEC15Q6ZMC9 328 aa13.43□□□□□ -0.26
SCAMP4-201ENST00000316097 CCL19Q99731 98 aa13.43□□□□□ -0.26
SCAMP4-201ENST00000316097 FAM104BQ5XKR9 115 aa13.43□□□□□ -0.26
SCAMP4-201ENST00000316097 VMO1Q7Z5L0 202 aa13.43□□□□□ -0.26
SCAMP4-201ENST00000316097 IFI27L1Q96BM0 104 aa13.43□□□□□ -0.26
SCAMP4-201ENST00000316097 NPFFR1Q9GZQ6 430 aa13.43□□□□□ -0.26
SCAMP4-201ENST00000316097 SIVA1O15304 175 aa13.42□□□□□ -0.26
SCAMP4-201ENST00000316097 CT45A10P0DMU9 189 aa13.42□□□□□ -0.26
SCAMP4-201ENST00000316097 OR5A1Q8NGJ0 315 aa13.42□□□□□ -0.26
SCAMP4-201ENST00000316097 SMKR1H3BMG3 65 aa13.42□□□□□ -0.26
SCAMP4-201ENST00000316097 LY6LH3BQJ8 138 aa13.42□□□□□ -0.26
SCAMP4-201ENST00000316097 TIMM23O14925 209 aa13.42□□□□□ -0.26
SCAMP4-201ENST00000316097 LMO4P61968 165 aa13.42□□□□□ -0.26
SCAMP4-201ENST00000316097 TNFRSF14Q92956 283 aa13.42□□□□□ -0.26
SCAMP4-201ENST00000316097 SIGLEC9Q9Y336 463 aa13.42□□□□□ -0.26
SCAMP4-201ENST00000316097 CHD6Q8TD26 2715 aa13.41□□□□□ -0.26
SCAMP4-201ENST00000316097 TEX22C9J3V5 150 aa13.41□□□□□ -0.26
SCAMP4-201ENST00000316097 MRPL51Q4U2R6 128 aaKnown RBP13.41□□□□□ -0.26
SCAMP4-201ENST00000316097 DKK2Q9UBU2 259 aa13.41□□□□□ -0.26
SCAMP4-201ENST00000316097 U3KQK5 164 aa13.41□□□□□ -0.26
SCAMP4-201ENST00000316097 IGKV1-17P01599 117 aa13.41□□□□□ -0.26
SCAMP4-201ENST00000316097 DYNAPQ8N1N2 210 aa13.41□□□□□ -0.26
SCAMP4-201ENST00000316097 TMEM189A5PLL7 270 aa13.4□□□□□ -0.26
SCAMP4-201ENST00000316097 FABP2P12104 132 aa13.4□□□□□ -0.26
SCAMP4-201ENST00000316097 SHANK2-AS3Q9BTD1 123 aa13.4□□□□□ -0.26
SCAMP4-201ENST00000316097 PRTN3P24158 256 aa13.4□□□□□ -0.26
SCAMP4-201ENST00000316097 I3L2K1 104 aa13.39□□□□□ -0.27
SCAMP4-201ENST00000316097 NPYP01303 97 aa13.39□□□□□ -0.27
SCAMP4-201ENST00000316097 CRYGBP07316 175 aa13.39□□□□□ -0.27
SCAMP4-201ENST00000316097 PPP1R27Q86WC6 154 aa13.39□□□□□ -0.27
SCAMP4-201ENST00000316097 C18orf15Q96N68 181 aa13.39□□□□□ -0.27
SCAMP4-201ENST00000316097 FBXL15Q9H469 300 aa13.39□□□□□ -0.27
SCAMP4-201ENST00000316097 H3BRN7 92 aa13.39□□□□□ -0.27
SCAMP4-201ENST00000316097 GCSHP23434 173 aa13.39□□□□□ -0.27
SCAMP4-201ENST00000316097 RPL24P83731 157 aaKnown RBP13.39□□□□□ -0.27
SCAMP4-201ENST00000316097 PAX8Q06710 450 aa13.39□□□□□ -0.27
SCAMP4-201ENST00000316097 SAMD5Q5TGI4 173 aa13.39□□□□□ -0.27
SCAMP4-201ENST00000316097 OR11H6Q8NGC7 330 aa13.39□□□□□ -0.27
SCAMP4-201ENST00000316097 CKS2P33552 79 aa13.38□□□□□ -0.27
SCAMP4-201ENST00000316097 DPM3Q9P2X0 92 aa13.38□□□□□ -0.27
SCAMP4-201ENST00000316097 M0R1W7 72 aa13.38□□□□□ -0.27
SCAMP4-201ENST00000316097 SH2D1AO60880 128 aa13.38□□□□□ -0.27
SCAMP4-201ENST00000316097 ATP5J2P56134 94 aa13.38□□□□□ -0.27
SCAMP4-201ENST00000316097 SMIM13P0DJ93 91 aa13.37□□□□□ -0.27
SCAMP4-201ENST00000316097 TTTY13Q9BZ97 58 aa13.37□□□□□ -0.27
SCAMP4-201ENST00000316097 IGHV4-61A0A0C4DH41 118 aa13.37□□□□□ -0.27
SCAMP4-201ENST00000316097 IL4P05112 153 aa13.37□□□□□ -0.27
SCAMP4-201ENST00000316097 FXYD2P54710 66 aa13.37□□□□□ -0.27
SCAMP4-201ENST00000316097 LYPD1Q8N2G4 141 aa13.37□□□□□ -0.27
SCAMP4-201ENST00000316097 FCGR2BP31994 310 aaPredicted RBP13.36□□□□□ -0.27
SCAMP4-201ENST00000316097 BCL6BQ8N143 479 aaPredicted RBP13.36□□□□□ -0.27
SCAMP4-201ENST00000316097 IGHV3OR16-10A0A075B7F0 116 aa13.36□□□□□ -0.27
SCAMP4-201ENST00000316097 HES1Q14469 280 aa13.36□□□□□ -0.27
SCAMP4-201ENST00000316097 TWIST1Q15672 202 aa13.36□□□□□ -0.27
SCAMP4-201ENST00000316097 SPOCK3Q9BQ16 436 aa13.36□□□□□ -0.27
SCAMP4-201ENST00000316097 SIRPDQ9H106 197 aa13.36□□□□□ -0.27
SCAMP4-201ENST00000316097 IGKV2D-26A0A0A0MRZ7 120 aa13.36□□□□□ -0.27
SCAMP4-201ENST00000316097 TEX48A0A1B0GUV7 120 aa13.36□□□□□ -0.27
SCAMP4-201ENST00000316097 ODF3BA8MYP8 253 aa13.36□□□□□ -0.27
SCAMP4-201ENST00000316097 K7ERJ3 54 aa13.36□□□□□ -0.27
SCAMP4-201ENST00000316097 SMIM17P0DL12 118 aa13.36□□□□□ -0.27
SCAMP4-201ENST00000316097 TMEM11P17152 192 aa13.36□□□□□ -0.27
SCAMP4-201ENST00000316097 PLGLAQ15195 96 aa13.36□□□□□ -0.27
SCAMP4-201ENST00000316097 RNF125Q96EQ8 232 aa13.36□□□□□ -0.27
SCAMP4-201ENST00000316097 IGHV4-30-2A0A087WSY4 118 aa13.35□□□□□ -0.27
SCAMP4-201ENST00000316097 GOSR1O95249 250 aa13.35□□□□□ -0.27
SCAMP4-201ENST00000316097 ZNF491Q8N8L2 437 aa13.35□□□□□ -0.27
SCAMP4-201ENST00000316097 S4R3C0 116 aa13.35□□□□□ -0.27
SCAMP4-201ENST00000316097 WI2-2373I1.2A0A1W2PRP0 233 aa13.35□□□□□ -0.27
SCAMP4-201ENST00000316097 MRPS12O15235 138 aaKnown RBP13.35□□□□□ -0.27
SCAMP4-201ENST00000316097 CIDEAO60543 219 aa13.35□□□□□ -0.27
SCAMP4-201ENST00000316097 SAMD13Q5VXD3 122 aa13.35□□□□□ -0.27
SCAMP4-201ENST00000316097 CFHR4Q92496 578 aa13.35□□□□□ -0.27
SCAMP4-201ENST00000316097 AAMDCQ9H7C9 122 aa13.35□□□□□ -0.27
SCAMP4-201ENST00000316097 ABCA12Q86UK0 2595 aa13.34□□□□□ -0.27
SCAMP4-201ENST00000316097 ABCA2Q9BZC7 2435 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms