RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 SAPCD1Q5SSQ6 148 aa9.66□□□□□ -0.86
SHANK2-AS3-201ENST00000307548 ZNF492Q9P255 531 aa9.66□□□□□ -0.86
SHANK2-AS3-201ENST00000307548 OVOL1O14753 267 aa9.65□□□□□ -0.86
SHANK2-AS3-201ENST00000307548 PFN1P07737 140 aaKnown RBP9.65□□□□□ -0.86
SHANK2-AS3-201ENST00000307548 OR5I1Q13606 314 aa9.65□□□□□ -0.86
SHANK2-AS3-201ENST00000307548 C9orf47Q6ZRZ4 202 aa9.65□□□□□ -0.86
SHANK2-AS3-201ENST00000307548 PRNTQ86SH4 94 aa9.65□□□□□ -0.86
SHANK2-AS3-201ENST00000307548 RNF182Q8N6D2 247 aa9.65□□□□□ -0.86
SHANK2-AS3-201ENST00000307548 SGK494Q96LW2 274 aa9.65□□□□□ -0.86
SHANK2-AS3-201ENST00000307548 MS4A6AQ9H2W1 248 aa9.65□□□□□ -0.86
SHANK2-AS3-201ENST00000307548 IGKV2-40A0A087WW87 121 aaPredicted RBP9.64□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 PRAC2D3DTV9 90 aa9.64□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 K7EQG2 157 aa9.64□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 IGKV2D-40P01614 121 aaPredicted RBP9.64□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 MGST1P10620 155 aaKnown RBP9.64□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 ERVFC1-1P60608 527 aa9.64□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 C20orf173Q96LM9 149 aa9.64□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 VGLL1Q99990 258 aa9.64□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 PAFAH1B2P68402 229 aa9.64□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 ELOBQ15370 118 aa9.64□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 DEFB114Q30KQ6 69 aa9.64□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 LINC01559Q495D7 138 aa9.64□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 PRR25Q96S07 402 aa9.64□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 LENEPQ9Y5L5 61 aa9.64□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 V9GYV3 84 aa9.64□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 TRAV25A0A0B4J276 109 aa9.63□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 C19orf71A6NCJ1 209 aa9.63□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 IBA57Q5T440 356 aaKnown RBP9.63□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 C12orf54Q6X4T0 127 aa9.63□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 NHLRC2Q8NBF2 726 aa9.63□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 LINC00477Q96M19 166 aa9.63□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 PYGO2Q9BRQ0 406 aa9.63□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 AGPAT4-IT1Q9H0P7 198 aa9.63□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 TRBV24-1A0A075B6N3 115 aa9.62□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 SHISA2Q6UWI4 295 aa9.62□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 FAM24BQ8N5W8 94 aa9.62□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 C3orf56Q8N813 242 aa9.62□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 ZNF738Q8NE65 137 aa9.62□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 NUDT10Q8NFP7 164 aa9.62□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 NUDT11Q96G61 164 aa9.62□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 RNASE7Q9H1E1 156 aaKnown RBP9.62□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 CMYA5Q8N3K9 4069 aa9.62□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 TRAV9-1A0A075B6T8 112 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 TRBV7-9A0A0J9YWB2 115 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 NPIPB6E9PJ23 425 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 S100PP25815 95 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 ZNF138P52744 262 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 SNRPD3P62318 126 aaKnown RBP9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 GBGT1Q8N5D6 347 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 LINC00482Q8N8I6 264 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 BTF3L4Q96K17 158 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 NDFIP1Q9BT67 221 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 IL36BQ9NZH7 164 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 WNK1Q9H4A3 2382 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 IGKV3-7A0A075B6H7 116 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 GATCO43716 136 aaKnown RBP9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 ERCC8Q13216 396 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 CT83Q5H943 113 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 TMEM78Q5T7P6 136 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 KCNIP4Q6PIL6 250 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 LINC00322Q6ZN03 302 aaPredicted RBP9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 OR4B1Q8NGF8 309 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 OR8A1Q8NGG7 326 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 OR10J6PQ8NGY7 276 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 DYNLRB2Q8TF09 96 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 ZC2HC1AQ96GY0 325 aa9.61□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 VWFP04275 2813 aa9.6□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 RBPMS2Q6ZRY4 209 aaKnown RBP9.6□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.6□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 DAZAP1Q96EP5 407 aaKnown RBP9.6□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 URGCP-MRPS24S4R325 110 aa9.6□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 SMIM27A0A1W2PRY6 76 aa9.59□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 ZNF705GA8MUZ8 300 aaPredicted RBP9.59□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 CT45A10P0DMU9 189 aa9.59□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 CRIP1P50238 77 aa9.59□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 SMUG1Q53HV7 270 aa9.59□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 OXLD1Q5BKU9 147 aa9.59□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 PRR27Q6MZM9 219 aa9.59□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 WFDC3Q8IUB2 231 aa9.59□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 TMEM61Q8N0U2 210 aa9.59□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 SPATA3Q8NHX4 192 aa9.59□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 C8orf49Q96NF6 230 aa9.59□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 SPAG8Q99932 426 aaPredicted RBP9.59□□□□□ -0.87
SHANK2-AS3-201ENST00000307548 FAM231BA6NCW3 169 aa9.58□□□□□ -0.88
SHANK2-AS3-201ENST00000307548 P01737 135 aa9.58□□□□□ -0.88
SHANK2-AS3-201ENST00000307548 CXCL1P09341 107 aa9.58□□□□□ -0.88
SHANK2-AS3-201ENST00000307548 RAB5AP20339 215 aa9.58□□□□□ -0.88
SHANK2-AS3-201ENST00000307548 OR2K2Q8NGT1 345 aa9.58□□□□□ -0.88
SHANK2-AS3-201ENST00000307548 Q8TAT8 98 aa9.58□□□□□ -0.88
SHANK2-AS3-201ENST00000307548 FAM19A4Q96LR4 140 aa9.58□□□□□ -0.88
SHANK2-AS3-201ENST00000307548 GPR61Q9BZJ8 451 aa9.58□□□□□ -0.88
SHANK2-AS3-201ENST00000307548 RPP21Q9H633 154 aaKnown RBP9.58□□□□□ -0.88
SHANK2-AS3-201ENST00000307548 SELENOKQ9Y6D0 94 aa9.58□□□□□ -0.88
SHANK2-AS3-201ENST00000307548 TGIF2-C20orf24A0A0A6YYL0 155 aa9.58□□□□□ -0.88
SHANK2-AS3-201ENST00000307548 A8MWL6 223 aa9.58□□□□□ -0.88
SHANK2-AS3-201ENST00000307548 PF4P02776 101 aa9.58□□□□□ -0.88
SHANK2-AS3-201ENST00000307548 TYMSP04818 313 aa9.58□□□□□ -0.88
SHANK2-AS3-201ENST00000307548 PRB4P10163 310 aaPredicted RBP9.58□□□□□ -0.88
SHANK2-AS3-201ENST00000307548 CD300EQ496F6 205 aaPredicted RBP9.58□□□□□ -0.88
SHANK2-AS3-201ENST00000307548 FAM162BQ5T6X4 162 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms