RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ERCC8Q13216 396 aa7.97□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 ZNF726P1Q15940 193 aa7.97□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 RRN3P1Q2M238 152 aa7.97□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 C9orf47Q6ZRZ4 202 aa7.97□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 C20orf144Q9BQM9 153 aa7.97□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 HUWE1Q7Z6Z7 4374 aaKnown RBP7.97□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 SERTM2A0A1B0GWG4 89 aa7.96□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 K7EQM0 130 aa7.96□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 CRXO43186 299 aaPredicted RBP7.96□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 CT45A10P0DMU9 189 aa7.96□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 C1orf158Q8N1D5 194 aa7.96□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 C9orf62Q8N4C0 152 aa7.96□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 ARL6IP6Q8N6S5 226 aa7.96□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 C5orf17Q8NAS9 161 aa7.96□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 SUN5Q8TC36 379 aa7.96□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 LINC01587Q99440 93 aa7.96□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 VGLL1Q99990 258 aa7.96□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 NIPSNAP3BQ9BS92 247 aa7.96□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 AGPAT4-IT1Q9H0P7 198 aa7.96□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 TENM3Q9P273 2699 aa7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 TEX48A0A1B0GUV7 120 aa7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 LOC102723971A0A1B0GUV8 181 aa7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 A0A1W2PRE2 83 aa7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 TEX46H3BTG2 121 aa7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 FHITP49789 147 aa7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 RAB5CP51148 216 aa7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 ZNF138P52744 262 aa7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 UBE2G2P60604 165 aa7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 SUMO1P63165 101 aaKnown RBP7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 GNG5P63218 68 aa7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 PMS2P11Q13670 270 aa7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 GFI1BQ5VTD9 330 aa7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 ZFAND6Q6FIF0 208 aa7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 GOLT1AQ6ZVE7 132 aa7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 C11orf45Q8TAV5 145 aa7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 SFT2D1Q8WV19 159 aa7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 NDFIP1Q9BT67 221 aa7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 NKX6-2Q9C056 277 aaPredicted RBP7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 TMPRSS5Q9H3S3 457 aa7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 ZNF492Q9P255 531 aa7.95□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 A0A1B0GV50 99 aa7.94□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 C7orf71A4D174 169 aa7.94□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 CXorf65A6NEN9 183 aa7.94□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 H7BYZ3 331 aa7.94□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 IFNA7P01567 189 aa7.94□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 GPX1P07203 203 aa7.94□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 H2AFB1P0C5Y9 115 aa7.94□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 RBMY1A1P0DJD3 496 aaKnown RBP7.94□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 RBMY1CP0DJD4 496 aa7.94□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 HTN1P15515 57 aa7.94□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 EMP1P54849 157 aa7.94□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 TAS2R60P59551 318 aa7.94□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 RBMY1FQ15415 496 aaKnown RBP7.94□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 Q8TAT8 98 aa7.94□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 LENEPQ9Y5L5 61 aa7.94□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 TRAV12-3A0A0B4J271 114 aa7.93□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 TRBV7-9A0A0J9YWB2 115 aa7.93□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 NUPR2A6NF83 97 aa7.93□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 ZNF705GA8MUZ8 300 aaPredicted RBP7.93□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 GGTLC3B5MD39 225 aa7.93□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 NMBP08949 121 aa7.93□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 CRISP2P16562 243 aa7.93□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 SULT1A2P50226 295 aa7.93□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 PPT1P50897 306 aa7.93□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 BTN1A1Q13410 526 aa7.93□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 CCDC28AQ8IWP9 274 aa7.93□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 C16orf74Q96GX8 76 aa7.93□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 ATG101Q9BSB4 218 aa7.93□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 ARL2-SNX15V9GYD0 113 aa7.93□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 FBLL1A6NHQ2 334 aaKnown RBP7.92□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 FAM74A7A6NL05 159 aa7.92□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 KLLNB2CW77 178 aa7.92□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 F6UZH7 168 aa7.92□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 TCRAP04437 139 aa7.92□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 SPART-AS1P0CW21 52 aa7.92□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 RNASE4P34096 147 aaKnown RBP7.92□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 NKX2-5P52952 324 aaPredicted RBP7.92□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 NANOS2P60321 138 aaKnown RBP7.92□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 KIR3DS1Q14943 382 aa7.92□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 CASC10Q5T4H9 136 aa7.92□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 CST9LP1Q5W188 147 aa7.92□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 CYB561D1Q8N8Q1 229 aa7.92□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 TMEM263Q8WUH6 116 aaKnown RBP7.92□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 MBD3L1Q8WWY6 194 aa7.92□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 FAM19A4Q96LR4 140 aa7.92□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 PYGO2Q9BRQ0 406 aa7.92□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 PLA2G2EQ9NZK7 142 aa7.92□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 EPDR1Q9UM22 224 aa7.92□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 YTHDF2Q9Y5A9 579 aaKnown RBP7.92□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 PEX7O00628 323 aa7.91□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 RGS13O14921 159 aa7.91□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 ZFAND2AQ8N6M9 145 aa7.91□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 TMEM75Q8N9X5 138 aa7.91□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 TCEAL7Q9BRU2 100 aa7.91□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 NBEAL2Q6ZNJ1 2754 aa7.9□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 TRAV8-1A0A0A6YYK1 113 aa7.9□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 PAGE4O60829 102 aa7.9□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 IFNA1P01562 189 aa7.9□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 FLI1Q01543 452 aaPredicted RBP7.9□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 FAM222AQ5U5X8 452 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms