RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 RAXQ9Y2V3 346 aa10.34□□□□□ -0.75
TRIM35-201ENST00000305364 H7C2G1 150 aa10.34□□□□□ -0.75
TRIM35-201ENST00000305364 IGHG3P01860 377 aa10.34□□□□□ -0.75
TRIM35-201ENST00000305364 IGHV1-8P0DP01 117 aa10.34□□□□□ -0.75
TRIM35-201ENST00000305364 GATA4P43694 442 aa10.34□□□□□ -0.75
TRIM35-201ENST00000305364 TMEM78Q5T7P6 136 aa10.34□□□□□ -0.75
TRIM35-201ENST00000305364 ZNF474Q6S9Z5 364 aaPredicted RBP10.34□□□□□ -0.75
TRIM35-201ENST00000305364 CEND1Q8N111 149 aa10.34□□□□□ -0.75
TRIM35-201ENST00000305364 ANKRD11Q6UB99 2663 aaPredicted RBP10.33□□□□□ -0.76
TRIM35-201ENST00000305364 UFSP1Q6NVU6 142 aa10.33□□□□□ -0.76
TRIM35-201ENST00000305364 LYPD1Q8N2G4 141 aa10.33□□□□□ -0.76
TRIM35-201ENST00000305364 SCGB3A1Q96QR1 104 aa10.33□□□□□ -0.76
TRIM35-201ENST00000305364 FOXE3Q13461 319 aa10.33□□□□□ -0.76
TRIM35-201ENST00000305364 TMEM14CQ9P0S9 112 aa10.33□□□□□ -0.76
TRIM35-201ENST00000305364 IGHV3-49A0A0A0MS15 119 aa10.33□□□□□ -0.76
TRIM35-201ENST00000305364 SPINK8P0C7L1 97 aa10.32□□□□□ -0.76
TRIM35-201ENST00000305364 ZNF562Q6V9R5 426 aa10.32□□□□□ -0.76
TRIM35-201ENST00000305364 GEMIN7Q9H840 131 aaKnown RBP10.32□□□□□ -0.76
TRIM35-201ENST00000305364 PGPEP1Q9NXJ5 209 aa10.32□□□□□ -0.76
TRIM35-201ENST00000305364 MRPL35Q9NZE8 188 aaKnown RBP10.32□□□□□ -0.76
TRIM35-201ENST00000305364 SRSF6Q13247 344 aaKnown RBP10.32□□□□□ -0.76
TRIM35-201ENST00000305364 C21orf62Q9NYP8 219 aa10.32□□□□□ -0.76
TRIM35-201ENST00000305364 DSCAMO60469 2012 aa10.32□□□□□ -0.76
TRIM35-201ENST00000305364 IGHV1-3A0A0C4DH29 117 aa10.32□□□□□ -0.76
TRIM35-201ENST00000305364 MSRB1Q9NZV6 116 aa10.31□□□□□ -0.76
TRIM35-201ENST00000305364 DSCAML1Q8TD84 2053 aa10.31□□□□□ -0.76
TRIM35-201ENST00000305364 NEGR1Q7Z3B1 354 aa10.31□□□□□ -0.76
TRIM35-201ENST00000305364 GATA1P15976 413 aaPredicted RBP10.31□□□□□ -0.76
TRIM35-201ENST00000305364 HERVK_113P61574 105 aa10.31□□□□□ -0.76
TRIM35-201ENST00000305364 C12orf74Q32Q52 190 aa10.31□□□□□ -0.76
TRIM35-201ENST00000305364 IGLL5B9A064 214 aa10.31□□□□□ -0.76
TRIM35-201ENST00000305364 BSPH1Q075Z2 132 aa10.31□□□□□ -0.76
TRIM35-201ENST00000305364 LAGE3Q14657 143 aa10.31□□□□□ -0.76
TRIM35-201ENST00000305364 SIGLEC15Q6ZMC9 328 aa10.31□□□□□ -0.76
TRIM35-201ENST00000305364 SYT8Q8NBV8 401 aa10.31□□□□□ -0.76
TRIM35-201ENST00000305364 TNRC6BQ9UPQ9 1833 aaKnown RBP10.3□□□□□ -0.76
TRIM35-201ENST00000305364 IGLV3-9A0A075B6K5 115 aa10.3□□□□□ -0.76
TRIM35-201ENST00000305364 F5H697 171 aa10.3□□□□□ -0.76
TRIM35-201ENST00000305364 M0R381 172 aa10.3□□□□□ -0.76
TRIM35-201ENST00000305364 ATP5G2Q06055 141 aa10.3□□□□□ -0.76
TRIM35-201ENST00000305364 Q71RC1 249 aaPredicted RBP10.3□□□□□ -0.76
TRIM35-201ENST00000305364 TMEM178BH3BS89 294 aa10.3□□□□□ -0.76
TRIM35-201ENST00000305364 EGR2P11161 476 aaPredicted RBP10.3□□□□□ -0.76
TRIM35-201ENST00000305364 KLRB1Q12918 225 aa10.3□□□□□ -0.76
TRIM35-201ENST00000305364 ECSCRQ19T08 205 aa10.3□□□□□ -0.76
TRIM35-201ENST00000305364 FOXI2Q6ZQN5 318 aa10.3□□□□□ -0.76
TRIM35-201ENST00000305364 PRR25Q96S07 402 aa10.3□□□□□ -0.76
TRIM35-201ENST00000305364 ZNF815PA8K554 130 aa10.3□□□□□ -0.76
TRIM35-201ENST00000305364 TIMM23O14925 209 aa10.3□□□□□ -0.76
TRIM35-201ENST00000305364 LYNX1G3V0Z9 82 aa10.29□□□□□ -0.76
TRIM35-201ENST00000305364 LYNX1P0DP58 116 aa10.29□□□□□ -0.76
TRIM35-201ENST00000305364 SRSF1Q07955 248 aaKnown RBP eCLIP10.29□□□□□ -0.76
TRIM35-201ENST00000305364 IGKV1-17P01599 117 aa10.29□□□□□ -0.76
TRIM35-201ENST00000305364 FGF6P10767 208 aa10.29□□□□□ -0.76
TRIM35-201ENST00000305364 IGKV2D-26A0A0A0MRZ7 120 aa10.29□□□□□ -0.76
TRIM35-201ENST00000305364 INS-IGF2F8WCM5 200 aa10.29□□□□□ -0.76
TRIM35-201ENST00000305364 H3BRN7 92 aa10.29□□□□□ -0.76
TRIM35-201ENST00000305364 IGLV2-23P01705 113 aa10.29□□□□□ -0.76
TRIM35-201ENST00000305364 SCGB1A1P11684 91 aa10.29□□□□□ -0.76
TRIM35-201ENST00000305364 VPS13AQ96RL7 3174 aa10.29□□□□□ -0.76
TRIM35-201ENST00000305364 ABCA2Q9BZC7 2435 aa10.28□□□□□ -0.76
TRIM35-201ENST00000305364 IGKV3-7A0A075B6H7 116 aa10.28□□□□□ -0.76
TRIM35-201ENST00000305364 ERCC8Q13216 396 aa10.28□□□□□ -0.76
TRIM35-201ENST00000305364 RUSC1-AS1Q66K80 236 aa10.28□□□□□ -0.76
TRIM35-201ENST00000305364 ZNF491Q8N8L2 437 aa10.28□□□□□ -0.76
TRIM35-201ENST00000305364 ANAPC13Q9BS18 74 aa10.28□□□□□ -0.76
TRIM35-201ENST00000305364 CELSR3Q9NYQ7 3312 aa10.28□□□□□ -0.76
TRIM35-201ENST00000305364 DLX4Q92988 240 aaPredicted RBP10.28□□□□□ -0.76
TRIM35-201ENST00000305364 MRAP2Q96G30 205 aa10.28□□□□□ -0.76
TRIM35-201ENST00000305364 K7EM74 188 aa10.28□□□□□ -0.76
TRIM35-201ENST00000305364 EFNA4P52798 201 aa10.28□□□□□ -0.76
TRIM35-201ENST00000305364 FAM57AQ8TBR7 257 aa10.28□□□□□ -0.76
TRIM35-201ENST00000305364 ADAMTS20P59510 1910 aa10.28□□□□□ -0.76
TRIM35-201ENST00000305364 MYO15AQ9UKN7 3530 aa10.28□□□□□ -0.76
TRIM35-201ENST00000305364 CRYGCP07315 174 aa10.28□□□□□ -0.76
TRIM35-201ENST00000305364 TEX36Q5VZQ5 186 aa10.28□□□□□ -0.76
TRIM35-201ENST00000305364 TRAV26-2A0A0B4J265 109 aa10.27□□□□□ -0.76
TRIM35-201ENST00000305364 NBR2O15453 112 aa10.27□□□□□ -0.76
TRIM35-201ENST00000305364 SPAG8Q99932 426 aaPredicted RBP10.27□□□□□ -0.76
TRIM35-201ENST00000305364 PDE6HQ13956 83 aa10.27□□□□□ -0.77
TRIM35-201ENST00000305364 LINC01559Q495D7 138 aa10.27□□□□□ -0.77
TRIM35-201ENST00000305364 DEFB104AQ8WTQ1 72 aa10.27□□□□□ -0.77
TRIM35-201ENST00000305364 PLNP26678 52 aa10.27□□□□□ -0.77
TRIM35-201ENST00000305364 DLX6P56179 175 aa10.27□□□□□ -0.77
TRIM35-201ENST00000305364 ODF1Q14990 250 aa10.27□□□□□ -0.77
TRIM35-201ENST00000305364 A0A1W2PNU3 283 aaPredicted RBP10.26□□□□□ -0.77
TRIM35-201ENST00000305364 HLA-DMBP28068 263 aa10.26□□□□□ -0.77
TRIM35-201ENST00000305364 LOXP28300 417 aaPredicted RBP10.26□□□□□ -0.77
TRIM35-201ENST00000305364 CRIP1P50238 77 aa10.26□□□□□ -0.77
TRIM35-201ENST00000305364 PHLDA3Q9Y5J5 127 aa10.26□□□□□ -0.77
TRIM35-201ENST00000305364 TRAV26-1A0A087WT03 109 aa10.26□□□□□ -0.77
TRIM35-201ENST00000305364 LINC01549A6NIU2 74 aa10.26□□□□□ -0.77
TRIM35-201ENST00000305364 IGLV2-11P01706 119 aa10.26□□□□□ -0.77
TRIM35-201ENST00000305364 ADIPOQQ15848 244 aa10.26□□□□□ -0.77
TRIM35-201ENST00000305364 DTX2Q86UW9 622 aa10.26□□□□□ -0.77
TRIM35-201ENST00000305364 CLUHP3Q96NS8 147 aa10.26□□□□□ -0.77
TRIM35-201ENST00000305364 HIGD1BQ9P298 99 aa10.26□□□□□ -0.77
TRIM35-201ENST00000305364 MBD3L4A6NDZ8 208 aaPredicted RBP10.26□□□□□ -0.77
TRIM35-201ENST00000305364 MBD3L3A6NE82 208 aaPredicted RBP10.26□□□□□ -0.77
TRIM35-201ENST00000305364 MBD3L5A6NJ08 208 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms