RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 LYPD2Q6UXB3 125 aa8.52□□□□□ -1.05
ZNF558-201ENST00000301475 LYPD1Q8N2G4 141 aa8.52□□□□□ -1.05
ZNF558-201ENST00000301475 PRSS47A8MTI9 375 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 THBDP07204 575 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 GATA1P15976 413 aaPredicted RBP8.51□□□□□ -1.05
ZNF558-201ENST00000301475 ZNF80P51504 273 aaPredicted RBP8.51□□□□□ -1.05
ZNF558-201ENST00000301475 Q8TAT8 98 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 MAP1LC3AQ9H492 121 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 PIEZO1Q92508 2521 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 TRAV26-1A0A087WT03 109 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 TMEM8BA6NDV4 472 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 LINC01546A6NGU7 62 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 IL4P05112 153 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 FCER1GP30273 86 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 DLX6P56179 175 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 C12orf74Q32Q52 190 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 ZNF491Q8N8L2 437 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 FDCSPQ8NFU4 85 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 BSNQ9UPA5 3926 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 K7EIM0 57 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 IGLC6P0CF74 106 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 KLF17Q5JT82 389 aaPredicted RBP8.51□□□□□ -1.05
ZNF558-201ENST00000301475 C8orf31Q8N9H6 132 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 RNF125Q96EQ8 232 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 FBXL15Q9H469 300 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 CTSZQ9UBR2 303 aa8.51□□□□□ -1.05
ZNF558-201ENST00000301475 DPM2O94777 84 aa8.5□□□□□ -1.05
ZNF558-201ENST00000301475 LOXP28300 417 aaPredicted RBP8.5□□□□□ -1.05
ZNF558-201ENST00000301475 PPP1R27Q86WC6 154 aa8.5□□□□□ -1.05
ZNF558-201ENST00000301475 TMEM158Q8WZ71 300 aa8.5□□□□□ -1.05
ZNF558-201ENST00000301475 TRAV40A0A0B4J280 105 aa8.5□□□□□ -1.05
ZNF558-201ENST00000301475 TMEM238LA0A1B0GVL6 79 aa8.5□□□□□ -1.05
ZNF558-201ENST00000301475 TCTEX1D4Q5JR98 221 aa8.5□□□□□ -1.05
ZNF558-201ENST00000301475 PSMG3-AS1Q96PY0 264 aa8.5□□□□□ -1.05
ZNF558-201ENST00000301475 C20orf78Q9BR46 151 aa8.5□□□□□ -1.05
ZNF558-201ENST00000301475 TMEM160Q9NX00 188 aa8.5□□□□□ -1.05
ZNF558-201ENST00000301475 S4R3C0 116 aa8.5□□□□□ -1.05
ZNF558-201ENST00000301475 CEACAM4O75871 244 aa8.49□□□□□ -1.05
ZNF558-201ENST00000301475 TNFRSF6BO95407 300 aa8.49□□□□□ -1.05
ZNF558-201ENST00000301475 SRSF1Q07955 248 aaKnown RBP eCLIP8.49□□□□□ -1.05
ZNF558-201ENST00000301475 PRR25Q96S07 402 aa8.49□□□□□ -1.05
ZNF558-201ENST00000301475 MRPL35Q9NZE8 188 aaKnown RBP8.49□□□□□ -1.05
ZNF558-201ENST00000301475 ZGRF1Q86YA3 2104 aa8.49□□□□□ -1.05
ZNF558-201ENST00000301475 IGHV1-8P0DP01 117 aa8.49□□□□□ -1.05
ZNF558-201ENST00000301475 PPIFP30405 207 aaKnown RBP8.49□□□□□ -1.05
ZNF558-201ENST00000301475 DEFB109BQ30KR1 87 aa8.49□□□□□ -1.05
ZNF558-201ENST00000301475 GAGE13Q4V321 117 aa8.49□□□□□ -1.05
ZNF558-201ENST00000301475 ZNF502Q8TBZ5 544 aa8.49□□□□□ -1.05
ZNF558-201ENST00000301475 MBD3L4A6NDZ8 208 aaPredicted RBP8.48□□□□□ -1.05
ZNF558-201ENST00000301475 MBD3L3A6NE82 208 aaPredicted RBP8.48□□□□□ -1.05
ZNF558-201ENST00000301475 MBD3L5A6NJ08 208 aaPredicted RBP8.48□□□□□ -1.05
ZNF558-201ENST00000301475 SCGB2A2Q13296 93 aa8.48□□□□□ -1.05
ZNF558-201ENST00000301475 RRN3P1Q2M238 152 aa8.48□□□□□ -1.05
ZNF558-201ENST00000301475 LCNL1Q6ZST4 164 aa8.48□□□□□ -1.05
ZNF558-201ENST00000301475 ASCL5Q7RTU5 278 aa8.48□□□□□ -1.05
ZNF558-201ENST00000301475 MBD3L2Q8NHZ7 208 aaPredicted RBP8.48□□□□□ -1.05
ZNF558-201ENST00000301475 AAMDCQ9H7C9 122 aa8.48□□□□□ -1.05
ZNF558-201ENST00000301475 HLA-DRB4P13762 266 aa8.48□□□□□ -1.05
ZNF558-201ENST00000301475 TMEM155Q4W5P6 130 aa8.48□□□□□ -1.05
ZNF558-201ENST00000301475 PSMG4Q5JS54 123 aa8.48□□□□□ -1.05
ZNF558-201ENST00000301475 TMEM190Q8WZ59 177 aa8.48□□□□□ -1.05
ZNF558-201ENST00000301475 HLA-DRB4X5D2U9 266 aa8.48□□□□□ -1.05
ZNF558-201ENST00000301475 PTPRQQ9UMZ3 2332 aa8.48□□□□□ -1.05
ZNF558-201ENST00000301475 CRYBA4P53673 196 aa8.48□□□□□ -1.05
ZNF558-201ENST00000301475 COX8CQ7Z4L0 72 aa8.48□□□□□ -1.05
ZNF558-201ENST00000301475 NXT2Q9NPJ8 142 aaKnown RBP8.48□□□□□ -1.05
ZNF558-201ENST00000301475 COL12A1Q99715 3063 aa8.48□□□□□ -1.05
ZNF558-201ENST00000301475 WNK2Q9Y3S1 2297 aa8.48□□□□□ -1.05
ZNF558-201ENST00000301475 IGLV2-18A0A075B6J9 118 aa8.47□□□□□ -1.05
ZNF558-201ENST00000301475 NDUFB3O43676 98 aa8.47□□□□□ -1.05
ZNF558-201ENST00000301475 CD40P25942 277 aa8.47□□□□□ -1.05
ZNF558-201ENST00000301475 PDE6HQ13956 83 aa8.47□□□□□ -1.05
ZNF558-201ENST00000301475 IGFL4Q6B9Z1 124 aa8.47□□□□□ -1.05
ZNF558-201ENST00000301475 MRAP2Q96G30 205 aa8.47□□□□□ -1.05
ZNF558-201ENST00000301475 TRBV7-3A0A075B6L6 115 aa8.47□□□□□ -1.05
ZNF558-201ENST00000301475 TMEM178BH3BS89 294 aa8.47□□□□□ -1.05
ZNF558-201ENST00000301475 FAM27E3Q08E93 113 aa8.47□□□□□ -1.05
ZNF558-201ENST00000301475 FHL3Q13643 280 aa8.47□□□□□ -1.05
ZNF558-201ENST00000301475 CCL17Q92583 94 aa8.47□□□□□ -1.05
ZNF558-201ENST00000301475 IGHV1-3A0A0C4DH29 117 aa8.46□□□□□ -1.05
ZNF558-201ENST00000301475 A0A1B0GWB2 263 aa8.46□□□□□ -1.05
ZNF558-201ENST00000301475 C17orf100A8MU93 164 aa8.46□□□□□ -1.05
ZNF558-201ENST00000301475 ATP5LO75964 103 aa8.46□□□□□ -1.05
ZNF558-201ENST00000301475 HLA-DMBP28068 263 aa8.46□□□□□ -1.05
ZNF558-201ENST00000301475 TTC9CQ8N5M4 171 aa8.46□□□□□ -1.05
ZNF558-201ENST00000301475 HIST1H4GQ99525 98 aa8.46□□□□□ -1.05
ZNF558-201ENST00000301475 CNFNQ9BYD5 112 aa8.46□□□□□ -1.05
ZNF558-201ENST00000301475 CDIP1Q9H305 208 aa8.46□□□□□ -1.05
ZNF558-201ENST00000301475 TNFRSF13BO14836 293 aaPredicted RBP8.46□□□□□ -1.06
ZNF558-201ENST00000301475 PLGLAQ15195 96 aa8.46□□□□□ -1.06
ZNF558-201ENST00000301475 TAL2Q16559 108 aa8.46□□□□□ -1.06
ZNF558-201ENST00000301475 C3orf36Q3SXR2 165 aa8.46□□□□□ -1.06
ZNF558-201ENST00000301475 MORN3Q6PF18 240 aaPredicted RBP8.46□□□□□ -1.06
ZNF558-201ENST00000301475 FAM215AQ9Y5M1 114 aa8.46□□□□□ -1.06
ZNF558-201ENST00000301475 APOMO95445 188 aa8.46□□□□□ -1.06
ZNF558-201ENST00000301475 SMCPP49901 116 aaPredicted RBP8.46□□□□□ -1.06
ZNF558-201ENST00000301475 GEMIN7Q9H840 131 aaKnown RBP8.46□□□□□ -1.06
ZNF558-201ENST00000301475 IGHG4P01861 327 aa8.45□□□□□ -1.06
ZNF558-201ENST00000301475 ORM1P02763 201 aa8.45□□□□□ -1.06
ZNF558-201ENST00000301475 SYT8Q8NBV8 401 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 347.4 ms