RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 TMEM78Q5T7P6 136 aa16.51■□□□□ 0.23
LINC01116-201ENST00000295549 CST9LP1Q5W188 147 aa16.51■□□□□ 0.23
LINC01116-201ENST00000295549 SPATA25Q9BR10 227 aa16.51■□□□□ 0.23
LINC01116-201ENST00000295549 TP53TG1Q9Y2A0 90 aa16.51■□□□□ 0.23
LINC01116-201ENST00000295549 GOLT1AQ6ZVE7 132 aa16.5■□□□□ 0.23
LINC01116-201ENST00000295549 CSNK1G2-AS1Q8NCQ2 148 aa16.5■□□□□ 0.23
LINC01116-201ENST00000295549 GNG13Q9P2W3 67 aa16.5■□□□□ 0.23
LINC01116-201ENST00000295549 XCL2Q9UBD3 114 aa16.5■□□□□ 0.23
LINC01116-201ENST00000295549 RPH3ALQ9UNE2 315 aa16.5■□□□□ 0.23
LINC01116-201ENST00000295549 AMBPP02760 352 aa16.49■□□□□ 0.23
LINC01116-201ENST00000295549 FXYD7P58549 80 aa16.49■□□□□ 0.23
LINC01116-201ENST00000295549 DEFB135Q30KP9 77 aa16.49■□□□□ 0.23
LINC01116-201ENST00000295549 HIST1H2BAQ96A08 127 aa16.49■□□□□ 0.23
LINC01116-201ENST00000295549 RNF183Q96D59 192 aa16.49■□□□□ 0.23
LINC01116-201ENST00000295549 FAM19A4Q96LR4 140 aa16.49■□□□□ 0.23
LINC01116-201ENST00000295549 ATG101Q9BSB4 218 aa16.49■□□□□ 0.23
LINC01116-201ENST00000295549 ZMAT4Q9H898 229 aa16.49■□□□□ 0.23
LINC01116-201ENST00000295549 ZNF492Q9P255 531 aa16.49■□□□□ 0.23
LINC01116-201ENST00000295549 K7EQM0 130 aa16.48■□□□□ 0.23
LINC01116-201ENST00000295549 TSPOP30536 169 aa16.48■□□□□ 0.23
LINC01116-201ENST00000295549 CDKN1BP46527 198 aa16.48■□□□□ 0.23
LINC01116-201ENST00000295549 ATP5G3P48201 142 aa16.48■□□□□ 0.23
LINC01116-201ENST00000295549 SPINK13Q1W4C9 94 aa16.48■□□□□ 0.23
LINC01116-201ENST00000295549 CYB561D1Q8N8Q1 229 aa16.48■□□□□ 0.23
LINC01116-201ENST00000295549 RCHY1Q96PM5 261 aa16.48■□□□□ 0.23
LINC01116-201ENST00000295549 TXNDC17Q9BRA2 123 aa16.48■□□□□ 0.23
LINC01116-201ENST00000295549 HUWE1Q7Z6Z7 4374 aaKnown RBP16.48■□□□□ 0.23
LINC01116-201ENST00000295549 TRBV7-9A0A0J9YWB2 115 aa16.47■□□□□ 0.23
LINC01116-201ENST00000295549 M0R2Z0 102 aa16.47■□□□□ 0.23
LINC01116-201ENST00000295549 IFNA1P01562 189 aa16.47■□□□□ 0.23
LINC01116-201ENST00000295549 ZNF138P52744 262 aa16.47■□□□□ 0.23
LINC01116-201ENST00000295549 OVOL2Q9BRP0 275 aa16.47■□□□□ 0.23
LINC01116-201ENST00000295549 C11orf94C9JXX5 98 aa16.46■□□□□ 0.23
LINC01116-201ENST00000295549 CRXO43186 299 aaPredicted RBP16.46■□□□□ 0.23
LINC01116-201ENST00000295549 SPRY2O43597 315 aa16.46■□□□□ 0.23
LINC01116-201ENST00000295549 TAGLN2P37802 199 aaKnown RBP16.46■□□□□ 0.23
LINC01116-201ENST00000295549 LEPP41159 167 aa16.46■□□□□ 0.23
LINC01116-201ENST00000295549 IGF2BP2-AS1Q96M15 143 aa16.46■□□□□ 0.23
LINC01116-201ENST00000295549 LENEPQ9Y5L5 61 aa16.46■□□□□ 0.23
LINC01116-201ENST00000295549 FBLL1A6NHQ2 334 aaKnown RBP16.45■□□□□ 0.22
LINC01116-201ENST00000295549 F6UZH7 168 aa16.45■□□□□ 0.22
LINC01116-201ENST00000295549 PEX7O00628 323 aa16.45■□□□□ 0.22
LINC01116-201ENST00000295549 NMBP08949 121 aa16.45■□□□□ 0.22
LINC01116-201ENST00000295549 CRISP2P16562 243 aa16.45■□□□□ 0.22
LINC01116-201ENST00000295549 BCL2P10415 239 aa16.45■□□□□ 0.22
LINC01116-201ENST00000295549 TMEM75Q8N9X5 138 aa16.45■□□□□ 0.22
LINC01116-201ENST00000295549 TRAV8-1A0A0A6YYK1 113 aa16.44■□□□□ 0.22
LINC01116-201ENST00000295549 IGLV2-11P01706 119 aa16.44■□□□□ 0.22
LINC01116-201ENST00000295549 Q8TAT8 98 aa16.44■□□□□ 0.22
LINC01116-201ENST00000295549 RETNQ9HD89 108 aa16.44■□□□□ 0.22
LINC01116-201ENST00000295549 TRAV12-2A0A075B6T6 113 aa16.43■□□□□ 0.22
LINC01116-201ENST00000295549 KLLNB2CW77 178 aa16.43■□□□□ 0.22
LINC01116-201ENST00000295549 INSP01308 110 aa16.43■□□□□ 0.22
LINC01116-201ENST00000295549 MEF2BQ02080 365 aaPredicted RBP16.43■□□□□ 0.22
LINC01116-201ENST00000295549 VAX2Q9UIW0 290 aa16.43■□□□□ 0.22
LINC01116-201ENST00000295549 COL7A1Q02388 2944 aa16.42■□□□□ 0.22
LINC01116-201ENST00000295549 KIR3DS1Q14943 382 aa16.42■□□□□ 0.22
LINC01116-201ENST00000295549 ZNF705AQ6ZN79 300 aaPredicted RBP16.42■□□□□ 0.22
LINC01116-201ENST00000295549 ZFAND2AQ8N6M9 145 aa16.42■□□□□ 0.22
LINC01116-201ENST00000295549 LINC00479Q96M42 142 aa16.42■□□□□ 0.22
LINC01116-201ENST00000295549 KLF12Q9Y4X4 402 aa16.42■□□□□ 0.22
LINC01116-201ENST00000295549 FLI1Q01543 452 aaPredicted RBP16.41■□□□□ 0.22
LINC01116-201ENST00000295549 ZNF767PQ75MW2 155 aa16.41■□□□□ 0.22
LINC01116-201ENST00000295549 C1orf158Q8N1D5 194 aa16.41■□□□□ 0.22
LINC01116-201ENST00000295549 SGK494Q96LW2 274 aa16.41■□□□□ 0.22
LINC01116-201ENST00000295549 RARRES2Q99969 163 aa16.41■□□□□ 0.22
LINC01116-201ENST00000295549 PSG8Q9UQ74 426 aa16.41■□□□□ 0.22
LINC01116-201ENST00000295549 TENM3Q9P273 2699 aa16.41■□□□□ 0.22
LINC01116-201ENST00000295549 LOC102723971A0A1B0GUV8 181 aa16.4■□□□□ 0.22
LINC01116-201ENST00000295549 GPX1P07203 203 aa16.4■□□□□ 0.22
LINC01116-201ENST00000295549 IFITM2Q01629 132 aa16.4■□□□□ 0.22
LINC01116-201ENST00000295549 GFI1BQ5VTD9 330 aa16.4■□□□□ 0.22
LINC01116-201ENST00000295549 OR11H2Q8NH07 326 aa16.4■□□□□ 0.22
LINC01116-201ENST00000295549 C2CD4CQ8TF44 421 aa16.4■□□□□ 0.22
LINC01116-201ENST00000295549 PCNPQ8WW12 178 aaKnown RBP16.4■□□□□ 0.22
LINC01116-201ENST00000295549 C20orf144Q9BQM9 153 aa16.4■□□□□ 0.22
LINC01116-201ENST00000295549 GOLT1BQ9Y3E0 138 aa16.4■□□□□ 0.22
LINC01116-201ENST00000295549 TRAV34A0A0B4J273 112 aa16.39■□□□□ 0.21
LINC01116-201ENST00000295549 SCO2A0A1W2PP80 73 aa16.39■□□□□ 0.21
LINC01116-201ENST00000295549 RBFOX3A6NFN3 312 aa16.39■□□□□ 0.21
LINC01116-201ENST00000295549 PDE6DO43924 150 aa16.39■□□□□ 0.21
LINC01116-201ENST00000295549 C11orf52Q96A22 123 aa16.39■□□□□ 0.21
LINC01116-201ENST00000295549 TVP23CQ96ET8 276 aa16.39■□□□□ 0.21
LINC01116-201ENST00000295549 FMC1Q96HJ9 113 aa16.39■□□□□ 0.21
LINC01116-201ENST00000295549 TGP01266 2768 aa16.39■□□□□ 0.21
LINC01116-201ENST00000295549 TMEM183BQ1AE95 376 aa16.38■□□□□ 0.21
LINC01116-201ENST00000295549 TMEM256Q8N2U0 113 aa16.38■□□□□ 0.21
LINC01116-201ENST00000295549 NEU1Q99519 415 aa16.38■□□□□ 0.21
LINC01116-201ENST00000295549 NDFIP1Q9BT67 221 aa16.38■□□□□ 0.21
LINC01116-201ENST00000295549 TREM1Q9NP99 234 aa16.38■□□□□ 0.21
LINC01116-201ENST00000295549 U3KQK5 164 aa16.38■□□□□ 0.21
LINC01116-201ENST00000295549 TRBV6-1A0A0K0K1D8 114 aa16.37■□□□□ 0.21
LINC01116-201ENST00000295549 C7orf71A4D174 169 aa16.37■□□□□ 0.21
LINC01116-201ENST00000295549 J3KRW8 73 aa16.37■□□□□ 0.21
LINC01116-201ENST00000295549 S100A9P06702 114 aaKnown RBP16.37■□□□□ 0.21
LINC01116-201ENST00000295549 RBMY1A1P0DJD3 496 aaKnown RBP16.37■□□□□ 0.21
LINC01116-201ENST00000295549 RBMY1CP0DJD4 496 aa16.37■□□□□ 0.21
LINC01116-201ENST00000295549 AKR1C3P42330 323 aa16.37■□□□□ 0.21
LINC01116-201ENST00000295549 RBMY1FQ15415 496 aaKnown RBP16.37■□□□□ 0.21
LINC01116-201ENST00000295549 ZNF506Q5JVG8 444 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms