RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 NPYP01303 97 aa13.08□□□□□ -0.31
CHRNE-201ENST00000293780 ERCC8Q13216 396 aa13.08□□□□□ -0.31
CHRNE-201ENST00000293780 THYN1Q9P016 225 aa13.08□□□□□ -0.31
CHRNE-201ENST00000293780 TMEM11P17152 192 aa13.08□□□□□ -0.32
CHRNE-201ENST00000293780 ADORA2A-AS1P86434 159 aa13.08□□□□□ -0.32
CHRNE-201ENST00000293780 COX8CQ7Z4L0 72 aa13.08□□□□□ -0.32
CHRNE-201ENST00000293780 FER1L6-AS1Q8NA97 138 aa13.08□□□□□ -0.32
CHRNE-201ENST00000293780 ATRXP46100 2492 aa13.08□□□□□ -0.32
CHRNE-201ENST00000293780 CHD8Q9HCK8 2581 aa13.08□□□□□ -0.32
CHRNE-201ENST00000293780 GAS8-AS1O95177 125 aa13.07□□□□□ -0.32
CHRNE-201ENST00000293780 CKS2P33552 79 aa13.07□□□□□ -0.32
CHRNE-201ENST00000293780 CACNG7P62955 275 aa13.07□□□□□ -0.32
CHRNE-201ENST00000293780 PAX8Q06710 450 aa13.07□□□□□ -0.32
CHRNE-201ENST00000293780 WFDC3Q8IUB2 231 aa13.07□□□□□ -0.32
CHRNE-201ENST00000293780 PRAC2D3DTV9 90 aa13.07□□□□□ -0.32
CHRNE-201ENST00000293780 C11orf71Q6IPW1 123 aa13.07□□□□□ -0.32
CHRNE-201ENST00000293780 PEF1Q9UBV8 284 aaKnown RBP13.07□□□□□ -0.32
CHRNE-201ENST00000293780 FGF6P10767 208 aa13.06□□□□□ -0.32
CHRNE-201ENST00000293780 CSTL1Q9H114 145 aa13.06□□□□□ -0.32
CHRNE-201ENST00000293780 K7ERU9 68 aa13.06□□□□□ -0.32
CHRNE-201ENST00000293780 ORM1P02763 201 aa13.06□□□□□ -0.32
CHRNE-201ENST00000293780 IGLC6P0CF74 106 aa13.06□□□□□ -0.32
CHRNE-201ENST00000293780 S100A7P31151 101 aa13.06□□□□□ -0.32
CHRNE-201ENST00000293780 CCDC144NLQ6NUI1 221 aa13.06□□□□□ -0.32
CHRNE-201ENST00000293780 IGHV3-66A0A0C4DH42 116 aa13.05□□□□□ -0.32
CHRNE-201ENST00000293780 RNF182Q8N6D2 247 aa13.05□□□□□ -0.32
CHRNE-201ENST00000293780 NDUFS7O75251 213 aa13.05□□□□□ -0.32
CHRNE-201ENST00000293780 PPIFP30405 207 aaKnown RBP13.05□□□□□ -0.32
CHRNE-201ENST00000293780 UCNP55089 124 aa13.05□□□□□ -0.32
CHRNE-201ENST00000293780 EBI3Q14213 229 aa13.05□□□□□ -0.32
CHRNE-201ENST00000293780 Q8N9W7 124 aa13.05□□□□□ -0.32
CHRNE-201ENST00000293780 PSMG3-AS1Q96PY0 264 aa13.05□□□□□ -0.32
CHRNE-201ENST00000293780 C7orf71A4D174 169 aa13.04□□□□□ -0.32
CHRNE-201ENST00000293780 HBDP02042 147 aa13.04□□□□□ -0.32
CHRNE-201ENST00000293780 BMI1P35226 326 aa13.04□□□□□ -0.32
CHRNE-201ENST00000293780 RNF185Q96GF1 192 aa13.04□□□□□ -0.32
CHRNE-201ENST00000293780 IGHV3OR16-13A0A075B7E8 117 aa13.04□□□□□ -0.32
CHRNE-201ENST00000293780 IGHV3-74A0A0B4J1X5 117 aa13.04□□□□□ -0.32
CHRNE-201ENST00000293780 ECSCRQ19T08 205 aa13.04□□□□□ -0.32
CHRNE-201ENST00000293780 C15orf32Q32M92 178 aa13.04□□□□□ -0.32
CHRNE-201ENST00000293780 LGALS9BQ3B8N2 356 aa13.04□□□□□ -0.32
CHRNE-201ENST00000293780 LGALS9CQ6DKI2 356 aa13.04□□□□□ -0.32
CHRNE-201ENST00000293780 PRSS57Q6UWY2 283 aa13.04□□□□□ -0.32
CHRNE-201ENST00000293780 VPS13CQ709C8 3753 aa13.04□□□□□ -0.32
CHRNE-201ENST00000293780 COL6A6A6NMZ7 2263 aa13.04□□□□□ -0.32
CHRNE-201ENST00000293780 CLEC3BP05452 202 aa13.03□□□□□ -0.32
CHRNE-201ENST00000293780 UQCRFS1P47985 274 aa13.03□□□□□ -0.32
CHRNE-201ENST00000293780 SPTBN1Q01082 2364 aaKnown RBP13.03□□□□□ -0.32
CHRNE-201ENST00000293780 TMEM97Q5BJF2 176 aa13.03□□□□□ -0.32
CHRNE-201ENST00000293780 IFI27L1Q96BM0 104 aa13.02□□□□□ -0.32
CHRNE-201ENST00000293780 MEGF9Q9H1U4 602 aa13.02□□□□□ -0.32
CHRNE-201ENST00000293780 GAGE10A6NGK3 116 aa13.02□□□□□ -0.33
CHRNE-201ENST00000293780 LINC01548A6NM66 108 aa13.02□□□□□ -0.33
CHRNE-201ENST00000293780 C1orf122Q6ZSJ8 110 aa13.02□□□□□ -0.33
CHRNE-201ENST00000293780 IL17RELQ6ZVW7 336 aa13.02□□□□□ -0.33
CHRNE-201ENST00000293780 C18orf15Q96N68 181 aa13.02□□□□□ -0.33
CHRNE-201ENST00000293780 DKK2Q9UBU2 259 aa13.02□□□□□ -0.33
CHRNE-201ENST00000293780 A0A1W2PPR1 153 aa13.01□□□□□ -0.33
CHRNE-201ENST00000293780 SAP30O75446 220 aa13.01□□□□□ -0.33
CHRNE-201ENST00000293780 GATA1P15976 413 aaPredicted RBP13.01□□□□□ -0.33
CHRNE-201ENST00000293780 MINOS1Q5TGZ0 78 aa13.01□□□□□ -0.33
CHRNE-201ENST00000293780 ZNF502Q8TBZ5 544 aa13.01□□□□□ -0.33
CHRNE-201ENST00000293780 ZFAND3Q9H8U3 227 aa13.01□□□□□ -0.33
CHRNE-201ENST00000293780 MINOS1-NBL1R4GNA1 71 aa13.01□□□□□ -0.33
CHRNE-201ENST00000293780 IGHV3-49A0A0A0MS15 119 aa13.01□□□□□ -0.33
CHRNE-201ENST00000293780 FABP5P3A8MUU1 101 aa13.01□□□□□ -0.33
CHRNE-201ENST00000293780 BUB3O43684 328 aa13.01□□□□□ -0.33
CHRNE-201ENST00000293780 EVI2AP22794 236 aa13.01□□□□□ -0.33
CHRNE-201ENST00000293780 CACNA1AO00555 2505 aa13□□□□□ -0.33
CHRNE-201ENST00000293780 AKAP6Q13023 2319 aa13□□□□□ -0.33
CHRNE-201ENST00000293780 OOSP1A8MZH6 123 aa13□□□□□ -0.33
CHRNE-201ENST00000293780 G3V318 75 aa13□□□□□ -0.33
CHRNE-201ENST00000293780 ATP6V0E1O15342 81 aa13□□□□□ -0.33
CHRNE-201ENST00000293780 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13□□□□□ -0.33
CHRNE-201ENST00000293780 BOD1L2Q8IYS8 172 aa13□□□□□ -0.33
CHRNE-201ENST00000293780 AJUBAQ96IF1 538 aa13□□□□□ -0.33
CHRNE-201ENST00000293780 SIRPDQ9H106 197 aa13□□□□□ -0.33
CHRNE-201ENST00000293780 SCGB2A1O75556 95 aa13□□□□□ -0.33
CHRNE-201ENST00000293780 SEC11AP67812 179 aa13□□□□□ -0.33
CHRNE-201ENST00000293780 DPF1Q92782 380 aa13□□□□□ -0.33
CHRNE-201ENST00000293780 FBLL1A6NHQ2 334 aaKnown RBP12.99□□□□□ -0.33
CHRNE-201ENST00000293780 ZNF207O43670 478 aaKnown RBP12.99□□□□□ -0.33
CHRNE-201ENST00000293780 CLEC19AQ6UXS0 136 aa12.99□□□□□ -0.33
CHRNE-201ENST00000293780 PCP2Q8IVA1 136 aa12.99□□□□□ -0.33
CHRNE-201ENST00000293780 OR1N2Q8NGR9 330 aa12.99□□□□□ -0.33
CHRNE-201ENST00000293780 FAM110DQ8TAY7 271 aaPredicted RBP12.99□□□□□ -0.33
CHRNE-201ENST00000293780 SELENOKQ9Y6D0 94 aa12.99□□□□□ -0.33
CHRNE-201ENST00000293780 CLPSL1A2RUU4 121 aa12.99□□□□□ -0.33
CHRNE-201ENST00000293780 RIPPLY3P57055 190 aa12.99□□□□□ -0.33
CHRNE-201ENST00000293780 C11orf21Q9P2W6 132 aa12.98□□□□□ -0.33
CHRNE-201ENST00000293780 IGKV3D-20A0A0C4DH25 116 aa12.98□□□□□ -0.33
CHRNE-201ENST00000293780 SMAD7O15105 426 aaKnown RBP12.98□□□□□ -0.33
CHRNE-201ENST00000293780 LEPP41159 167 aa12.98□□□□□ -0.33
CHRNE-201ENST00000293780 NMUP48645 174 aa12.98□□□□□ -0.33
CHRNE-201ENST00000293780 UFSP1Q6NVU6 142 aa12.98□□□□□ -0.33
CHRNE-201ENST00000293780 Q6ZQT7 251 aa12.98□□□□□ -0.33
CHRNE-201ENST00000293780 CCDC140Q96MF4 163 aa12.98□□□□□ -0.33
CHRNE-201ENST00000293780 AP1S3Q96PC3 154 aa12.98□□□□□ -0.33
CHRNE-201ENST00000293780 CNFNQ9BYD5 112 aa12.98□□□□□ -0.33
CHRNE-201ENST00000293780 MAP1LC3AQ9H492 121 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms