RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 PSMB8P28062 276 aa6.56□□□□□ -1.36
PTPDC1-201ENST00000288976 FHITP49789 147 aa6.56□□□□□ -1.36
PTPDC1-201ENST00000288976 CYB561D1Q8N8Q1 229 aa6.56□□□□□ -1.36
PTPDC1-201ENST00000288976 RNF151Q2KHN1 245 aa6.56□□□□□ -1.36
PTPDC1-201ENST00000288976 ASCL2Q99929 193 aa6.56□□□□□ -1.36
PTPDC1-201ENST00000288976 PSMG3Q9BT73 122 aaPredicted RBP6.56□□□□□ -1.36
PTPDC1-201ENST00000288976 LSM4Q9Y4Z0 139 aaKnown RBP6.56□□□□□ -1.36
PTPDC1-201ENST00000288976 FLNAP21333 2647 aaKnown RBP6.56□□□□□ -1.36
PTPDC1-201ENST00000288976 LINC01548A6NM66 108 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 K7EIM0 57 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 TMEM97Q5BJF2 176 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 TMEM144Q7Z5S9 345 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 B4DEV8 164 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 H7C1H1 209 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 DMRTA1Q5VZB9 504 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 OR4C5Q8NGB2 326 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 KCNS1Q96KK3 526 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 VAMP8Q9BV40 100 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 WFDC1Q9HC57 220 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 WDR83OSQ9Y284 106 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 LINC00862A6NCI5 91 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 PYYP10082 97 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 PRR31Q5SQ13 230 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 OR10D4PQ8NGN7 298 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 NUDT11Q96G61 164 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 OVOL1O14753 267 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 ATP5LO75964 103 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 DUSP14O95147 198 aaKnown RBP6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 DAD1P61803 113 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 SERF2P84101 59 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 MEF2BQ02080 365 aaPredicted RBP6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 SAPCD1Q5SSQ6 148 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 TRGV9Q99603 122 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 TCEAL7Q9BRU2 100 aa6.55□□□□□ -1.36
PTPDC1-201ENST00000288976 TREML4Q6UXN2 200 aa6.54□□□□□ -1.36
PTPDC1-201ENST00000288976 DPPA3Q6W0C5 159 aa6.54□□□□□ -1.36
PTPDC1-201ENST00000288976 Q6ZS46 218 aa6.54□□□□□ -1.36
PTPDC1-201ENST00000288976 TMEM158Q8WZ71 300 aa6.54□□□□□ -1.36
PTPDC1-201ENST00000288976 LOC107984156A0A0G2JMH3 177 aa6.54□□□□□ -1.36
PTPDC1-201ENST00000288976 ZNF815PA8K554 130 aa6.54□□□□□ -1.36
PTPDC1-201ENST00000288976 APCSP02743 223 aa6.54□□□□□ -1.36
PTPDC1-201ENST00000288976 WDR73Q6P4I2 378 aa6.54□□□□□ -1.36
PTPDC1-201ENST00000288976 ARL17AQ8IVW1 177 aa6.54□□□□□ -1.36
PTPDC1-201ENST00000288976 LINC00477Q96M19 166 aa6.54□□□□□ -1.36
PTPDC1-201ENST00000288976 PDE6DO43924 150 aa6.54□□□□□ -1.36
PTPDC1-201ENST00000288976 GNG5P63218 68 aa6.54□□□□□ -1.36
PTPDC1-201ENST00000288976 SPSB3Q6PJ21 355 aa6.54□□□□□ -1.36
PTPDC1-201ENST00000288976 TMEM191AQ9H0A3 160 aa6.54□□□□□ -1.36
PTPDC1-201ENST00000288976 FNDC4Q9H6D8 234 aaPredicted RBP6.54□□□□□ -1.36
PTPDC1-201ENST00000288976 SDF2L1Q9HCN8 221 aa6.54□□□□□ -1.36
PTPDC1-201ENST00000288976 PEF1Q9UBV8 284 aaKnown RBP6.54□□□□□ -1.36
PTPDC1-201ENST00000288976 DMBT1Q9UGM3 2413 aaPredicted RBP6.54□□□□□ -1.36
PTPDC1-201ENST00000288976 SEC11BP0C7V7 166 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 FOXL1Q12952 345 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 TCTEX1D4Q5JR98 221 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 Q9HAA7 133 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 CLPSL1A2RUU4 121 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 C7orf71A4D174 169 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 CA1P00915 261 aaPredicted RBP6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 YPEL3P61236 119 aaPredicted RBP6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 AWAT1Q58HT5 328 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 LINC00469Q8N7U9 141 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 PHLDA1Q8WV24 401 aaPredicted RBP6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 MAP1LC3CQ9BXW4 147 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 SH3BGRL3Q9H299 93 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 ELOBQ15370 118 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 GTF2H5Q6ZYL4 71 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 MIR17HGQ75NE6 70 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 ZNF491Q8N8L2 437 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 CLRN3Q8NCR9 226 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 RCHY1Q96PM5 261 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 NPCDR1Q9BY65 106 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 MAP1LC3AQ9H492 121 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 MAP1AP78559 2803 aaPredicted RBP6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 H3BQ15 152 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 NDUFB8O95169 186 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 SIGLEC15Q6ZMC9 328 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 C8orf86Q6ZUL3 223 aa6.53□□□□□ -1.36
PTPDC1-201ENST00000288976 IGHV3-16A0A0C4DH30 117 aa6.52□□□□□ -1.37
PTPDC1-201ENST00000288976 BCL2P10415 239 aa6.52□□□□□ -1.37
PTPDC1-201ENST00000288976 CIRBPQ14011 172 aaKnown RBP6.52□□□□□ -1.37
PTPDC1-201ENST00000288976 C4orf3Q8WVX3 66 aa6.52□□□□□ -1.37
PTPDC1-201ENST00000288976 C19orf24Q9BVV8 132 aa6.52□□□□□ -1.37
PTPDC1-201ENST00000288976 LOC102724200A0A096LPH7 203 aaPredicted RBP6.52□□□□□ -1.37
PTPDC1-201ENST00000288976 TRAV8-6A0A0B4J262 113 aa6.52□□□□□ -1.37
PTPDC1-201ENST00000288976 TOMM40O96008 361 aa6.52□□□□□ -1.37
PTPDC1-201ENST00000288976 GCHFRP30047 84 aa6.52□□□□□ -1.37
PTPDC1-201ENST00000288976 MLANAQ16655 118 aa6.52□□□□□ -1.37
PTPDC1-201ENST00000288976 SPINK13Q1W4C9 94 aa6.52□□□□□ -1.37
PTPDC1-201ENST00000288976 LINC01006Q8NI28 216 aa6.52□□□□□ -1.37
PTPDC1-201ENST00000288976 Q8TAT8 98 aa6.52□□□□□ -1.37
PTPDC1-201ENST00000288976 MGST2Q99735 147 aa6.52□□□□□ -1.37
PTPDC1-201ENST00000288976 ZFHX3Q15911 3703 aa6.52□□□□□ -1.37
PTPDC1-201ENST00000288976 PSG1P11464 419 aa6.52□□□□□ -1.37
PTPDC1-201ENST00000288976 PLP1P60201 277 aa6.52□□□□□ -1.37
PTPDC1-201ENST00000288976 RPL24P83731 157 aaKnown RBP6.52□□□□□ -1.37
PTPDC1-201ENST00000288976 VPS25Q9BRG1 176 aa6.52□□□□□ -1.37
PTPDC1-201ENST00000288976 C1QTNF4Q9BXJ3 329 aa6.52□□□□□ -1.37
PTPDC1-201ENST00000288976 IGKV1D-37A0A075B6S9 117 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 F8W735 103 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms