RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 COX8AP10176 69 aa10.1□□□□□ -0.79
SLC6A1-201ENST00000287766 COL8A2P25067 703 aa10.1□□□□□ -0.79
SLC6A1-201ENST00000287766 FAM106AQ4KMX7 169 aa10.1□□□□□ -0.79
SLC6A1-201ENST00000287766 TMEM167AQ8TBQ9 72 aa10.1□□□□□ -0.79
SLC6A1-201ENST00000287766 DOPEY1Q5JWR5 2465 aa10.1□□□□□ -0.79
SLC6A1-201ENST00000287766 WT1-ASQ06250 92 aa10.09□□□□□ -0.79
SLC6A1-201ENST00000287766 RRN3P1Q2M238 152 aa10.09□□□□□ -0.79
SLC6A1-201ENST00000287766 SMIM20Q8N5G0 67 aa10.09□□□□□ -0.79
SLC6A1-201ENST00000287766 ZNF625Q96I27 306 aaPredicted RBP10.09□□□□□ -0.79
SLC6A1-201ENST00000287766 TMEM101Q96IK0 257 aa10.09□□□□□ -0.79
SLC6A1-201ENST00000287766 NACAE9PAV3 2078 aa10.09□□□□□ -0.79
SLC6A1-201ENST00000287766 H7C1H1 209 aa10.09□□□□□ -0.79
SLC6A1-201ENST00000287766 SH2D6Q7Z4S9 175 aa10.09□□□□□ -0.79
SLC6A1-201ENST00000287766 EEF1AKMT3Q96AZ1 226 aa10.09□□□□□ -0.79
SLC6A1-201ENST00000287766 DKK4Q9UBT3 224 aa10.09□□□□□ -0.79
SLC6A1-201ENST00000287766 NOTCH2Q04721 2471 aa10.09□□□□□ -0.79
SLC6A1-201ENST00000287766 IGLC7A0M8Q6 106 aa10.09□□□□□ -0.79
SLC6A1-201ENST00000287766 TMEM8BA6NDV4 472 aa10.09□□□□□ -0.79
SLC6A1-201ENST00000287766 TRGV3P03979 118 aa10.09□□□□□ -0.79
SLC6A1-201ENST00000287766 COA6Q5JTJ3 125 aaKnown RBP10.09□□□□□ -0.79
SLC6A1-201ENST00000287766 V9GYV3 84 aa10.09□□□□□ -0.79
SLC6A1-201ENST00000287766 PTPN13Q12923 2485 aa10.09□□□□□ -0.79
SLC6A1-201ENST00000287766 IGHV1-3A0A0C4DH29 117 aa10.08□□□□□ -0.8
SLC6A1-201ENST00000287766 TMEM213A2RRL7 107 aa10.08□□□□□ -0.8
SLC6A1-201ENST00000287766 ZNF672Q499Z4 452 aaPredicted RBP10.08□□□□□ -0.8
SLC6A1-201ENST00000287766 Q8TCH9 128 aa10.08□□□□□ -0.8
SLC6A1-201ENST00000287766 SONP18583 2426 aaKnown RBP10.08□□□□□ -0.8
SLC6A1-201ENST00000287766 IGHV1-24A0A0C4DH33 117 aa10.08□□□□□ -0.8
SLC6A1-201ENST00000287766 K7EN84 100 aa10.08□□□□□ -0.8
SLC6A1-201ENST00000287766 NBR2O15453 112 aa10.08□□□□□ -0.8
SLC6A1-201ENST00000287766 IGHV3-11P01762 117 aa10.08□□□□□ -0.8
SLC6A1-201ENST00000287766 FRMD6-AS1P0C7T7 363 aa10.08□□□□□ -0.8
SLC6A1-201ENST00000287766 F8W1H4 67 aa10.08□□□□□ -0.8
SLC6A1-201ENST00000287766 VGLL1Q99990 258 aa10.08□□□□□ -0.8
SLC6A1-201ENST00000287766 SLC25A39Q9BZJ4 359 aaPredicted RBP10.08□□□□□ -0.8
SLC6A1-201ENST00000287766 E7EQL1 145 aa10.07□□□□□ -0.8
SLC6A1-201ENST00000287766 TMPRSS3P57727 454 aa10.07□□□□□ -0.8
SLC6A1-201ENST00000287766 RPL15P61313 204 aaKnown RBP10.07□□□□□ -0.8
SLC6A1-201ENST00000287766 PROP1O75360 226 aa10.07□□□□□ -0.8
SLC6A1-201ENST00000287766 BRWD1-AS2P59051 145 aa10.07□□□□□ -0.8
SLC6A1-201ENST00000287766 DAZAP2Q15038 168 aaPredicted RBP10.07□□□□□ -0.8
SLC6A1-201ENST00000287766 ZNF562Q6V9R5 426 aa10.07□□□□□ -0.8
SLC6A1-201ENST00000287766 PPDPFLQ8WWR9 84 aa10.07□□□□□ -0.8
SLC6A1-201ENST00000287766 DEFB125Q8N687 156 aa10.07□□□□□ -0.8
SLC6A1-201ENST00000287766 SNRPD3P62318 126 aaKnown RBP10.06□□□□□ -0.8
SLC6A1-201ENST00000287766 FAM168AQ92567 244 aa10.06□□□□□ -0.8
SLC6A1-201ENST00000287766 SIGLEC9Q9Y336 463 aa10.06□□□□□ -0.8
SLC6A1-201ENST00000287766 CD28P10747 220 aa10.06□□□□□ -0.8
SLC6A1-201ENST00000287766 C3orf36Q3SXR2 165 aa10.06□□□□□ -0.8
SLC6A1-201ENST00000287766 MORN5Q5VZ52 161 aa10.06□□□□□ -0.8
SLC6A1-201ENST00000287766 PVRIGQ6DKI7 326 aa10.06□□□□□ -0.8
SLC6A1-201ENST00000287766 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.06□□□□□ -0.8
SLC6A1-201ENST00000287766 GAGE12JA6NER3 117 aa10.06□□□□□ -0.8
SLC6A1-201ENST00000287766 GAGE7O76087 117 aa10.06□□□□□ -0.8
SLC6A1-201ENST00000287766 GAGE12FP0CL80 117 aa10.06□□□□□ -0.8
SLC6A1-201ENST00000287766 GAGE12GP0CL81 117 aa10.06□□□□□ -0.8
SLC6A1-201ENST00000287766 GAGE12IP0CL82 117 aa10.06□□□□□ -0.8
SLC6A1-201ENST00000287766 GAGE4Q13068 117 aa10.06□□□□□ -0.8
SLC6A1-201ENST00000287766 NDUFA4L2Q9NRX3 87 aa10.06□□□□□ -0.8
SLC6A1-201ENST00000287766 SORL1Q92673 2214 aa10.05□□□□□ -0.8
SLC6A1-201ENST00000287766 VCANP13611 3396 aa10.05□□□□□ -0.8
SLC6A1-201ENST00000287766 SH2D1AO60880 128 aa10.05□□□□□ -0.8
SLC6A1-201ENST00000287766 ZNF329Q86UD4 541 aa10.05□□□□□ -0.8
SLC6A1-201ENST00000287766 CITED2Q99967 270 aaPredicted RBP10.05□□□□□ -0.8
SLC6A1-201ENST00000287766 LAMA1P25391 3075 aa10.05□□□□□ -0.8
SLC6A1-201ENST00000287766 KMT2EQ8IZD2 1858 aa10.05□□□□□ -0.8
SLC6A1-201ENST00000287766 CENPVQ7Z7K6 275 aaPredicted RBP10.05□□□□□ -0.8
SLC6A1-201ENST00000287766 C14orf178Q8N769 122 aaPredicted RBP10.05□□□□□ -0.8
SLC6A1-201ENST00000287766 C11orf68Q9H3H3 251 aaKnown RBP10.05□□□□□ -0.8
SLC6A1-201ENST00000287766 ANKRD11Q6UB99 2663 aaPredicted RBP10.04□□□□□ -0.8
SLC6A1-201ENST00000287766 IGLV3-9A0A075B6K5 115 aa10.04□□□□□ -0.8
SLC6A1-201ENST00000287766 LINC01559Q495D7 138 aa10.04□□□□□ -0.8
SLC6A1-201ENST00000287766 SEM1Q6ZVN7 128 aa10.04□□□□□ -0.8
SLC6A1-201ENST00000287766 LOXP28300 417 aaPredicted RBP10.04□□□□□ -0.8
SLC6A1-201ENST00000287766 PRR20EP86478 221 aa10.04□□□□□ -0.8
SLC6A1-201ENST00000287766 PRR20CP86479 221 aa10.04□□□□□ -0.8
SLC6A1-201ENST00000287766 PRR20DP86480 221 aa10.04□□□□□ -0.8
SLC6A1-201ENST00000287766 PRR20BP86481 221 aa10.04□□□□□ -0.8
SLC6A1-201ENST00000287766 PRR20AP86496 221 aa10.04□□□□□ -0.8
SLC6A1-201ENST00000287766 HCFC1P51610 2035 aa10.04□□□□□ -0.8
SLC6A1-201ENST00000287766 TOMM40O96008 361 aa10.03□□□□□ -0.8
SLC6A1-201ENST00000287766 SLC25A16P16260 332 aa10.03□□□□□ -0.8
SLC6A1-201ENST00000287766 PDLIM4P50479 330 aa10.03□□□□□ -0.8
SLC6A1-201ENST00000287766 LY6DQ14210 128 aa10.03□□□□□ -0.8
SLC6A1-201ENST00000287766 BUB1B-PAK6H3BSN5 160 aa10.03□□□□□ -0.8
SLC6A1-201ENST00000287766 IFITM1P13164 125 aa10.03□□□□□ -0.8
SLC6A1-201ENST00000287766 SRD5A1P18405 259 aa10.03□□□□□ -0.8
SLC6A1-201ENST00000287766 GAGE5Q13069 117 aa10.03□□□□□ -0.8
SLC6A1-201ENST00000287766 GAGE6Q13070 117 aa10.03□□□□□ -0.8
SLC6A1-201ENST00000287766 GAGE2AQ6NT46 116 aa10.03□□□□□ -0.8
SLC6A1-201ENST00000287766 GATD1Q8NB37 220 aa10.03□□□□□ -0.8
SLC6A1-201ENST00000287766 PYGO2Q9BRQ0 406 aa10.03□□□□□ -0.8
SLC6A1-201ENST00000287766 GATA4P43694 442 aa10.03□□□□□ -0.8
SLC6A1-201ENST00000287766 PCP2Q8IVA1 136 aa10.03□□□□□ -0.8
SLC6A1-201ENST00000287766 SLC50A1Q9BRV3 221 aa10.03□□□□□ -0.8
SLC6A1-201ENST00000287766 YAE1D1Q9NRH1 226 aa10.03□□□□□ -0.8
SLC6A1-201ENST00000287766 SPEGQ15772 3267 aa10.03□□□□□ -0.8
SLC6A1-201ENST00000287766 ZNF876PQ49A33 203 aa10.03□□□□□ -0.8
SLC6A1-201ENST00000287766 KIAA1549Q9HCM3 1950 aa10.02□□□□□ -0.8
SLC6A1-201ENST00000287766 RBMY1BA6NDE4 496 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms