RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 S100A7AQ86SG5 101 aa8.17□□□□□ -1.1
SKA1-201ENST00000285116 ZNF414Q96IQ9 312 aa8.17□□□□□ -1.1
SKA1-201ENST00000285116 SIGLEC8Q9NYZ4 499 aa8.17□□□□□ -1.1
SKA1-201ENST00000285116 ABCA2Q9BZC7 2435 aa8.17□□□□□ -1.1
SKA1-201ENST00000285116 ITPR2Q14571 2701 aa8.17□□□□□ -1.1
SKA1-201ENST00000285116 A0A1B0GV72 72 aa8.17□□□□□ -1.1
SKA1-201ENST00000285116 FBLL1A6NHQ2 334 aaKnown RBP8.17□□□□□ -1.1
SKA1-201ENST00000285116 H3BTX0 84 aa8.17□□□□□ -1.1
SKA1-201ENST00000285116 K7EQM0 130 aa8.17□□□□□ -1.1
SKA1-201ENST00000285116 PRRG2O14669 202 aa8.17□□□□□ -1.1
SKA1-201ENST00000285116 LOXL1Q08397 574 aaPredicted RBP8.17□□□□□ -1.1
SKA1-201ENST00000285116 SIGLEC15Q6ZMC9 328 aa8.17□□□□□ -1.1
SKA1-201ENST00000285116 CLUHP3Q96NS8 147 aa8.17□□□□□ -1.1
SKA1-201ENST00000285116 WI2-2373I1.2A0A1W2PRP0 233 aa8.16□□□□□ -1.1
SKA1-201ENST00000285116 ENSAO43768 121 aaKnown RBP8.16□□□□□ -1.1
SKA1-201ENST00000285116 HBDP02042 147 aa8.16□□□□□ -1.1
SKA1-201ENST00000285116 NMUP48645 174 aa8.16□□□□□ -1.1
SKA1-201ENST00000285116 GOLT1AQ6ZVE7 132 aa8.16□□□□□ -1.1
SKA1-201ENST00000285116 RASL11BQ9BPW5 248 aa8.16□□□□□ -1.1
SKA1-201ENST00000285116 J3QR89 54 aa8.16□□□□□ -1.1
SKA1-201ENST00000285116 GOSR1O95249 250 aa8.16□□□□□ -1.1
SKA1-201ENST00000285116 PCP2Q8IVA1 136 aa8.16□□□□□ -1.1
SKA1-201ENST00000285116 PIFOQ8TCI5 191 aa8.16□□□□□ -1.1
SKA1-201ENST00000285116 RAB1BQ9H0U4 201 aa8.16□□□□□ -1.1
SKA1-201ENST00000285116 GTSF1LQ9H1H1 148 aa8.16□□□□□ -1.1
SKA1-201ENST00000285116 MTORP42345 2549 aa8.16□□□□□ -1.1
SKA1-201ENST00000285116 B9A039 149 aa8.16□□□□□ -1.1
SKA1-201ENST00000285116 K7EIM0 57 aa8.16□□□□□ -1.1
SKA1-201ENST00000285116 CNTFRP26992 372 aa8.16□□□□□ -1.1
SKA1-201ENST00000285116 LYZP61626 148 aa8.16□□□□□ -1.1
SKA1-201ENST00000285116 CD300EQ496F6 205 aaPredicted RBP8.16□□□□□ -1.1
SKA1-201ENST00000285116 VGLL1Q99990 258 aa8.16□□□□□ -1.1
SKA1-201ENST00000285116 HIGD1BQ9P298 99 aa8.16□□□□□ -1.1
SKA1-201ENST00000285116 ABCA1O95477 2261 aa8.15□□□□□ -1.1
SKA1-201ENST00000285116 LOC389332A0A1B0GUA5 103 aa8.15□□□□□ -1.1
SKA1-201ENST00000285116 D6R8Y8 96 aa8.15□□□□□ -1.1
SKA1-201ENST00000285116 E7EQL1 145 aa8.15□□□□□ -1.1
SKA1-201ENST00000285116 J3KRW8 73 aa8.15□□□□□ -1.1
SKA1-201ENST00000285116 TCTAP57738 103 aa8.15□□□□□ -1.1
SKA1-201ENST00000285116 SMAGPQ0VAQ4 97 aa8.15□□□□□ -1.1
SKA1-201ENST00000285116 NPBQ8NG41 125 aa8.15□□□□□ -1.1
SKA1-201ENST00000285116 IFI27L1Q96BM0 104 aa8.15□□□□□ -1.1
SKA1-201ENST00000285116 PRELID3AQ96N28 172 aa8.15□□□□□ -1.1
SKA1-201ENST00000285116 GAGE12HA6NDE8 117 aa8.15□□□□□ -1.11
SKA1-201ENST00000285116 FCGR2BP31994 310 aaPredicted RBP8.15□□□□□ -1.11
SKA1-201ENST00000285116 SRSF2Q01130 221 aaKnown RBP8.15□□□□□ -1.11
SKA1-201ENST00000285116 ORMDL3Q8N138 153 aa8.15□□□□□ -1.11
SKA1-201ENST00000285116 LY6G5BQ8NDX9 201 aa8.15□□□□□ -1.11
SKA1-201ENST00000285116 IGFBPL1Q8WX77 278 aa8.15□□□□□ -1.11
SKA1-201ENST00000285116 ATP6V0BQ99437 205 aa8.15□□□□□ -1.11
SKA1-201ENST00000285116 PSG8Q9UQ74 426 aa8.15□□□□□ -1.11
SKA1-201ENST00000285116 NDUFA3O95167 84 aa8.14□□□□□ -1.11
SKA1-201ENST00000285116 GCSHP23434 173 aa8.14□□□□□ -1.11
SKA1-201ENST00000285116 FOXI2Q6ZQN5 318 aa8.14□□□□□ -1.11
SKA1-201ENST00000285116 BCL6BQ8N143 479 aaPredicted RBP8.14□□□□□ -1.11
SKA1-201ENST00000285116 ZNF491Q8N8L2 437 aa8.14□□□□□ -1.11
SKA1-201ENST00000285116 DYNLRB1Q9NP97 96 aa8.14□□□□□ -1.11
SKA1-201ENST00000285116 IGHV3-72A0A0B4J1Y9 119 aa8.14□□□□□ -1.11
SKA1-201ENST00000285116 F8W1H4 67 aa8.14□□□□□ -1.11
SKA1-201ENST00000285116 PF4V1P10720 104 aa8.14□□□□□ -1.11
SKA1-201ENST00000285116 PAX8Q06710 450 aa8.14□□□□□ -1.11
SKA1-201ENST00000285116 FAM104BQ5XKR9 115 aa8.14□□□□□ -1.11
SKA1-201ENST00000285116 EXOC3-AS1Q8N2X6 119 aa8.14□□□□□ -1.11
SKA1-201ENST00000285116 TSSC4Q9Y5U2 329 aaPredicted RBP8.14□□□□□ -1.11
SKA1-201ENST00000285116 NAV2Q8IVL1 2488 aa8.14□□□□□ -1.11
SKA1-201ENST00000285116 ARFGEF3Q5TH69 2177 aa8.14□□□□□ -1.11
SKA1-201ENST00000285116 ZNF207O43670 478 aaKnown RBP8.13□□□□□ -1.11
SKA1-201ENST00000285116 CDSNQ15517 529 aa8.13□□□□□ -1.11
SKA1-201ENST00000285116 TPPP3Q9BW30 176 aa8.13□□□□□ -1.11
SKA1-201ENST00000285116 GRNP28799 593 aaKnown RBP8.13□□□□□ -1.11
SKA1-201ENST00000285116 FXYD2P54710 66 aa8.13□□□□□ -1.11
SKA1-201ENST00000285116 Q71RC1 249 aaPredicted RBP8.13□□□□□ -1.11
SKA1-201ENST00000285116 OR11H6Q8NGC7 330 aa8.13□□□□□ -1.11
SKA1-201ENST00000285116 RPEQ96AT9 228 aa8.13□□□□□ -1.11
SKA1-201ENST00000285116 RNF125Q96EQ8 232 aa8.13□□□□□ -1.11
SKA1-201ENST00000285116 FBXL15Q9H469 300 aa8.13□□□□□ -1.11
SKA1-201ENST00000285116 LINC01546A6NGU7 62 aa8.13□□□□□ -1.11
SKA1-201ENST00000285116 NPIPB5A8MRT5 1133 aa8.13□□□□□ -1.11
SKA1-201ENST00000285116 NDUFS7O75251 213 aa8.13□□□□□ -1.11
SKA1-201ENST00000285116 CRIP1P50238 77 aa8.13□□□□□ -1.11
SKA1-201ENST00000285116 SPATA25Q9BR10 227 aa8.13□□□□□ -1.11
SKA1-201ENST00000285116 PHLDA1Q8WV24 401 aaPredicted RBP8.12□□□□□ -1.11
SKA1-201ENST00000285116 SPANXB1Q9NS25 103 aaPredicted RBP8.12□□□□□ -1.11
SKA1-201ENST00000285116 MALRD1Q5VYJ5 2156 aa8.12□□□□□ -1.11
SKA1-201ENST00000285116 AMN1Q8IY45 258 aa8.12□□□□□ -1.11
SKA1-201ENST00000285116 Q8NA96 180 aa8.12□□□□□ -1.11
SKA1-201ENST00000285116 CFHR4Q92496 578 aa8.12□□□□□ -1.11
SKA1-201ENST00000285116 CHAC1Q9BUX1 264 aa8.12□□□□□ -1.11
SKA1-201ENST00000285116 DKK2Q9UBU2 259 aa8.12□□□□□ -1.11
SKA1-201ENST00000285116 KLK9Q2XQG4 91 aa8.11□□□□□ -1.11
SKA1-201ENST00000285116 TM2D2Q9BX73 214 aa8.11□□□□□ -1.11
SKA1-201ENST00000285116 KLK9Q9UKQ9 250 aa8.11□□□□□ -1.11
SKA1-201ENST00000285116 ARHGAP32A7KAX9 2087 aa8.11□□□□□ -1.11
SKA1-201ENST00000285116 E9PLD3 99 aa8.11□□□□□ -1.11
SKA1-201ENST00000285116 NBR2O15453 112 aa8.11□□□□□ -1.11
SKA1-201ENST00000285116 FXYD7P58549 80 aa8.11□□□□□ -1.11
SKA1-201ENST00000285116 PLGLAQ15195 96 aa8.11□□□□□ -1.11
SKA1-201ENST00000285116 MRPL51Q4U2R6 128 aaKnown RBP8.11□□□□□ -1.11
SKA1-201ENST00000285116 LYZL1Q6UWQ5 148 aa8.11□□□□□ -1.11
SKA1-201ENST00000285116 SETXQ7Z333 2677 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms